RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 NDFIP1Q9BT67 221 aa12.17□□□□□ -0.46
FAM3A-216ENST00000449971 CYTL1Q9NRR1 136 aa12.17□□□□□ -0.46
FAM3A-216ENST00000449971 EPDR1Q9UM22 224 aa12.17□□□□□ -0.46
FAM3A-216ENST00000449971 CTXND1A0A1B0GTU2 59 aa12.16□□□□□ -0.46
FAM3A-216ENST00000449971 PSG8Q9UQ74 426 aa12.16□□□□□ -0.46
FAM3A-216ENST00000449971 GGTLC3B5MD39 225 aa12.15□□□□□ -0.46
FAM3A-216ENST00000449971 GNRH2O43555 120 aa12.15□□□□□ -0.46
FAM3A-216ENST00000449971 VSIG2Q96IQ7 327 aa12.15□□□□□ -0.46
FAM3A-216ENST00000449971 SPXQ9BT56 116 aa12.15□□□□□ -0.46
FAM3A-216ENST00000449971 A0A1W2PRE2 83 aa12.14□□□□□ -0.47
FAM3A-216ENST00000449971 PAX4O43316 350 aa12.14□□□□□ -0.47
FAM3A-216ENST00000449971 FGF8P55075 233 aaPredicted RBP12.14□□□□□ -0.47
FAM3A-216ENST00000449971 UBE2G2P60604 165 aa12.14□□□□□ -0.47
FAM3A-216ENST00000449971 ESRGQ1W209 222 aa12.14□□□□□ -0.47
FAM3A-216ENST00000449971 TDRG1Q3Y452 100 aa12.14□□□□□ -0.47
FAM3A-216ENST00000449971 PRNTQ86SH4 94 aa12.14□□□□□ -0.47
FAM3A-216ENST00000449971 C6orf223Q8N319 242 aa12.14□□□□□ -0.47
FAM3A-216ENST00000449971 C8orf49Q96NF6 230 aa12.14□□□□□ -0.47
FAM3A-216ENST00000449971 NBDYA0A0U1RRE5 68 aa12.13□□□□□ -0.47
FAM3A-216ENST00000449971 IFNA7P01567 189 aa12.13□□□□□ -0.47
FAM3A-216ENST00000449971 FLI1Q01543 452 aaPredicted RBP12.13□□□□□ -0.47
FAM3A-216ENST00000449971 SPATA12Q7Z6I5 190 aa12.13□□□□□ -0.47
FAM3A-216ENST00000449971 KCNRGQ8N5I3 272 aa12.13□□□□□ -0.47
FAM3A-216ENST00000449971 CYB561D1Q8N8Q1 229 aa12.13□□□□□ -0.47
FAM3A-216ENST00000449971 SDF2L1Q9HCN8 221 aa12.13□□□□□ -0.47
FAM3A-216ENST00000449971 A0A096LPF7 62 aa12.12□□□□□ -0.47
FAM3A-216ENST00000449971 IGHV3-16A0A0C4DH30 117 aa12.12□□□□□ -0.47
FAM3A-216ENST00000449971 IGLV2-11P01706 119 aa12.12□□□□□ -0.47
FAM3A-216ENST00000449971 SLAQ13239 276 aa12.12□□□□□ -0.47
FAM3A-216ENST00000449971 RASL10AQ92737 203 aa12.12□□□□□ -0.47
FAM3A-216ENST00000449971 KCNS1Q96KK3 526 aa12.12□□□□□ -0.47
FAM3A-216ENST00000449971 Q9H8V8 135 aa12.12□□□□□ -0.47
FAM3A-216ENST00000449971 PRO0255Q9UI72 69 aa12.12□□□□□ -0.47
FAM3A-216ENST00000449971 HHLA3Q9XRX5 114 aa12.12□□□□□ -0.47
FAM3A-216ENST00000449971 TRGV4A0A0C4DH28 118 aa12.11□□□□□ -0.47
FAM3A-216ENST00000449971 MAP1LC3B2A6NCE7 125 aa12.11□□□□□ -0.47
FAM3A-216ENST00000449971 GCGP01275 180 aa12.11□□□□□ -0.47
FAM3A-216ENST00000449971 TYMSP04818 313 aa12.11□□□□□ -0.47
FAM3A-216ENST00000449971 ZNF80P51504 273 aaPredicted RBP12.11□□□□□ -0.47
FAM3A-216ENST00000449971 FHL2Q14192 279 aa12.11□□□□□ -0.47
FAM3A-216ENST00000449971 TMEM75Q8N9X5 138 aa12.11□□□□□ -0.47
FAM3A-216ENST00000449971 OR11H4Q8NGC9 324 aa12.11□□□□□ -0.47
FAM3A-216ENST00000449971 LINC00479Q96M42 142 aa12.11□□□□□ -0.47
FAM3A-216ENST00000449971 MAP1LC3BQ9GZQ8 125 aa12.11□□□□□ -0.47
FAM3A-216ENST00000449971 TRAV34A0A0B4J273 112 aa12.1□□□□□ -0.47
FAM3A-216ENST00000449971 FBLL1A6NHQ2 334 aaKnown RBP12.1□□□□□ -0.47
FAM3A-216ENST00000449971 HMSDA8MTL9 139 aa12.1□□□□□ -0.47
FAM3A-216ENST00000449971 M0R2P5 195 aa12.1□□□□□ -0.47
FAM3A-216ENST00000449971 SFTA3P0C7M3 94 aa12.1□□□□□ -0.47
FAM3A-216ENST00000449971 CRYBA4P53673 196 aa12.1□□□□□ -0.47
FAM3A-216ENST00000449971 ZNF345Q14585 488 aa12.1□□□□□ -0.47
FAM3A-216ENST00000449971 ZFP69Q49AA0 526 aa12.1□□□□□ -0.47
FAM3A-216ENST00000449971 SMUG1Q53HV7 270 aa12.1□□□□□ -0.47
FAM3A-216ENST00000449971 SAPCD1Q5SSQ6 148 aa12.1□□□□□ -0.47
FAM3A-216ENST00000449971 ZNF479Q96JC4 524 aa12.1□□□□□ -0.47
FAM3A-216ENST00000449971 ICOSQ9Y6W8 199 aa12.1□□□□□ -0.47
FAM3A-216ENST00000449971 A0A0D9SG52 128 aa12.09□□□□□ -0.47
FAM3A-216ENST00000449971 FAM74A7A6NL05 159 aa12.09□□□□□ -0.47
FAM3A-216ENST00000449971 PPT1P50897 306 aa12.09□□□□□ -0.47
FAM3A-216ENST00000449971 STOML3Q8TAV4 291 aa12.09□□□□□ -0.47
FAM3A-216ENST00000449971 NKX6-2Q9C056 277 aaPredicted RBP12.09□□□□□ -0.47
FAM3A-216ENST00000449971 MRPS16Q9Y3D3 137 aaKnown RBP12.09□□□□□ -0.47
FAM3A-216ENST00000449971 KANTRA0A1W2PQU2 76 aa12.08□□□□□ -0.48
FAM3A-216ENST00000449971 PEX7O00628 323 aa12.08□□□□□ -0.48
FAM3A-216ENST00000449971 PFN1P07737 140 aaKnown RBP12.08□□□□□ -0.48
FAM3A-216ENST00000449971 FHITP49789 147 aa12.08□□□□□ -0.48
FAM3A-216ENST00000449971 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.48
FAM3A-216ENST00000449971 ZNF471Q9BX82 626 aaPredicted RBP12.08□□□□□ -0.48
FAM3A-216ENST00000449971 C11orf21Q9P2W6 132 aa12.08□□□□□ -0.48
FAM3A-216ENST00000449971 SEC11BP0C7V7 166 aa12.07□□□□□ -0.48
FAM3A-216ENST00000449971 UPK3BQ9BT76 320 aa12.07□□□□□ -0.48
FAM3A-216ENST00000449971 TRAV4A0A0B4J268 109 aa12.06□□□□□ -0.48
FAM3A-216ENST00000449971 C9JCJ5 164 aa12.06□□□□□ -0.48
FAM3A-216ENST00000449971 BCL2L11O43521 198 aa12.06□□□□□ -0.48
FAM3A-216ENST00000449971 MRPL23Q16540 153 aaKnown RBP12.06□□□□□ -0.48
FAM3A-216ENST00000449971 CST9LP1Q5W188 147 aa12.06□□□□□ -0.48
FAM3A-216ENST00000449971 HIST1H2BAQ96A08 127 aa12.06□□□□□ -0.48
FAM3A-216ENST00000449971 ARL2-SNX15V9GYD0 113 aa12.06□□□□□ -0.48
FAM3A-216ENST00000449971 DMBT1Q9UGM3 2413 aaPredicted RBP12.05□□□□□ -0.48
FAM3A-216ENST00000449971 FAM213BQ8TBF2 198 aa12.05□□□□□ -0.48
FAM3A-216ENST00000449971 SFT2D1Q8WV19 159 aa12.05□□□□□ -0.48
FAM3A-216ENST00000449971 EPM2AB3EWF7 344 aa12.04□□□□□ -0.48
FAM3A-216ENST00000449971 UMAD1C9J7I0 102 aa12.04□□□□□ -0.48
FAM3A-216ENST00000449971 PFDN1O60925 122 aa12.04□□□□□ -0.48
FAM3A-216ENST00000449971 EIF5AP63241 154 aaKnown RBP12.04□□□□□ -0.48
FAM3A-216ENST00000449971 ZNF876PQ49A33 203 aa12.04□□□□□ -0.48
FAM3A-216ENST00000449971 TTC32Q5I0X7 151 aa12.04□□□□□ -0.48
FAM3A-216ENST00000449971 TMUB2Q71RG4 321 aa12.04□□□□□ -0.48
FAM3A-216ENST00000449971 PCNPQ8WW12 178 aaKnown RBP12.04□□□□□ -0.48
FAM3A-216ENST00000449971 A0A1B0GV50 99 aa12.03□□□□□ -0.48
FAM3A-216ENST00000449971 FABP5P3A8MUU1 101 aa12.03□□□□□ -0.48
FAM3A-216ENST00000449971 GYPEP15421 78 aa12.03□□□□□ -0.48
FAM3A-216ENST00000449971 SRIP30626 198 aa12.03□□□□□ -0.48
FAM3A-216ENST00000449971 KRTAP10-2P60368 255 aa12.03□□□□□ -0.48
FAM3A-216ENST00000449971 LYPD5Q6UWN5 251 aa12.03□□□□□ -0.48
FAM3A-216ENST00000449971 NEGR1Q7Z3B1 354 aa12.03□□□□□ -0.48
FAM3A-216ENST00000449971 Q86TA4 180 aa12.03□□□□□ -0.48
FAM3A-216ENST00000449971 MBD3L1Q8WWY6 194 aa12.03□□□□□ -0.48
FAM3A-216ENST00000449971 K7EQD1 137 aa12.02□□□□□ -0.49
FAM3A-216ENST00000449971 PAGE4O60829 102 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms