RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 EXOC3-AS1Q8N2X6 119 aa10.47□□□□□ -0.73
SYNGAP1-204ENST00000449372 IGHG4P01861 327 aa10.47□□□□□ -0.73
SYNGAP1-204ENST00000449372 EMP1P54849 157 aa10.47□□□□□ -0.73
SYNGAP1-204ENST00000449372 ARFGEF3Q5TH69 2177 aa10.47□□□□□ -0.73
SYNGAP1-204ENST00000449372 IGHV3-72A0A0B4J1Y9 119 aa10.47□□□□□ -0.73
SYNGAP1-204ENST00000449372 PRB4P10163 310 aaPredicted RBP10.47□□□□□ -0.73
SYNGAP1-204ENST00000449372 CDSNQ15517 529 aa10.47□□□□□ -0.73
SYNGAP1-204ENST00000449372 IGHV3-21A0A0B4J1V1 117 aa10.46□□□□□ -0.73
SYNGAP1-204ENST00000449372 LINC01619G3V211 115 aa10.46□□□□□ -0.73
SYNGAP1-204ENST00000449372 MDFICQ9P1T7 246 aa10.46□□□□□ -0.73
SYNGAP1-204ENST00000449372 ZNRD1Q9P1U0 126 aa10.46□□□□□ -0.73
SYNGAP1-204ENST00000449372 HRNRQ86YZ3 2850 aaPredicted RBP10.46□□□□□ -0.73
SYNGAP1-204ENST00000449372 ICE1Q9Y2F5 2266 aa10.46□□□□□ -0.73
SYNGAP1-204ENST00000449372 IGHV1-3A0A0C4DH29 117 aa10.46□□□□□ -0.73
SYNGAP1-204ENST00000449372 ITPR1Q14643 2758 aa10.46□□□□□ -0.74
SYNGAP1-204ENST00000449372 DLX6P56179 175 aa10.46□□□□□ -0.74
SYNGAP1-204ENST00000449372 MRPL23Q16540 153 aaKnown RBP10.46□□□□□ -0.74
SYNGAP1-204ENST00000449372 CTSZQ9UBR2 303 aa10.46□□□□□ -0.74
SYNGAP1-204ENST00000449372 LRBAP50851 2863 aa10.46□□□□□ -0.74
SYNGAP1-204ENST00000449372 CRIP1P50238 77 aa10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 LYPD2Q6UXB3 125 aa10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 TIMD4Q96H15 378 aa10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 CGB1A6NKQ9 187 aa10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 E7EUB6 86 aa10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 GRNP28799 593 aaKnown RBP10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 SRSF9Q13242 221 aaKnown RBP eCLIP10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 OR11H6Q8NGC7 330 aa10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 OR13C6PQ8NH95 151 aa10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 MRPL36Q9P0J6 103 aaKnown RBP10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 HOXB4P17483 251 aaPredicted RBP10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 ADORA2A-AS1P86434 159 aa10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 KLRB1Q12918 225 aa10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 C15orf53Q8NAA6 179 aa10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 DNAJC30Q96LL9 226 aa10.45□□□□□ -0.74
SYNGAP1-204ENST00000449372 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.44□□□□□ -0.74
SYNGAP1-204ENST00000449372 LINC00694P0DN24 101 aa10.44□□□□□ -0.74
SYNGAP1-204ENST00000449372 PCNX1Q96RV3 2341 aa10.44□□□□□ -0.74
SYNGAP1-204ENST00000449372 TPRP12270 2363 aaKnown RBP10.44□□□□□ -0.74
SYNGAP1-204ENST00000449372 SLC25A20O43772 301 aa10.44□□□□□ -0.74
SYNGAP1-204ENST00000449372 UBE2D1P51668 147 aa10.44□□□□□ -0.74
SYNGAP1-204ENST00000449372 BUB1B-PAK6H3BSN5 160 aa10.44□□□□□ -0.74
SYNGAP1-204ENST00000449372 SRSF2Q01130 221 aaKnown RBP10.44□□□□□ -0.74
SYNGAP1-204ENST00000449372 TMEM78Q5T7P6 136 aa10.44□□□□□ -0.74
SYNGAP1-204ENST00000449372 MYOZ3Q8TDC0 251 aa10.44□□□□□ -0.74
SYNGAP1-204ENST00000449372 HES1Q14469 280 aa10.43□□□□□ -0.74
SYNGAP1-204ENST00000449372 CHCHD5Q9BSY4 110 aa10.43□□□□□ -0.74
SYNGAP1-204ENST00000449372 SIGLEC15Q6ZMC9 328 aa10.43□□□□□ -0.74
SYNGAP1-204ENST00000449372 I3L2K1 104 aa10.43□□□□□ -0.74
SYNGAP1-204ENST00000449372 LGALS1P09382 135 aaKnown RBP10.43□□□□□ -0.74
SYNGAP1-204ENST00000449372 COX7A1P24310 79 aa10.43□□□□□ -0.74
SYNGAP1-204ENST00000449372 LINC01587Q99440 93 aa10.43□□□□□ -0.74
SYNGAP1-204ENST00000449372 POLEQ07864 2286 aa10.43□□□□□ -0.74
SYNGAP1-204ENST00000449372 IGF2RP11717 2491 aa10.43□□□□□ -0.74
SYNGAP1-204ENST00000449372 LOC107984640A0A0U1RRK4 108 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 NBR2O15453 112 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 CRYGBP07316 175 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 CD3EP07766 207 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 PLNP26678 52 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 TPSG1Q9NRR2 321 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 C21orf62Q9NYP8 219 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 ONECUT1Q9UBC0 465 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 C9JAW5 83 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 SH2D1AO60880 128 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 SCGB1D4Q6XE38 83 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 DPM3Q9P2X0 92 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 ORM1P02763 201 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 LINC01560Q8TB33 94 aa10.42□□□□□ -0.74
SYNGAP1-204ENST00000449372 GAS8-AS1O95177 125 aa10.41□□□□□ -0.74
SYNGAP1-204ENST00000449372 APELAP0DMC3 54 aa10.41□□□□□ -0.74
SYNGAP1-204ENST00000449372 ODF3Q96PU9 254 aa10.41□□□□□ -0.74
SYNGAP1-204ENST00000449372 WIPF1O43516 503 aa10.41□□□□□ -0.74
SYNGAP1-204ENST00000449372 LINC01546A6NGU7 62 aa10.41□□□□□ -0.74
SYNGAP1-204ENST00000449372 TNFRSF6BO95407 300 aa10.41□□□□□ -0.74
SYNGAP1-204ENST00000449372 TRAV8-4A0A0B4J246 113 aa10.4□□□□□ -0.74
SYNGAP1-204ENST00000449372 TEX22C9J3V5 150 aa10.4□□□□□ -0.74
SYNGAP1-204ENST00000449372 Q8N1Y9 231 aa10.4□□□□□ -0.74
SYNGAP1-204ENST00000449372 IGKV1-17P01599 117 aa10.4□□□□□ -0.74
SYNGAP1-204ENST00000449372 NDUFA11Q86Y39 141 aa10.4□□□□□ -0.74
SYNGAP1-204ENST00000449372 ZNF491Q8N8L2 437 aa10.4□□□□□ -0.74
SYNGAP1-204ENST00000449372 NTN5Q8WTR8 489 aaPredicted RBP10.4□□□□□ -0.74
SYNGAP1-204ENST00000449372 C8orf49Q96NF6 230 aa10.4□□□□□ -0.74
SYNGAP1-204ENST00000449372 CCL21O00585 134 aa10.4□□□□□ -0.74
SYNGAP1-204ENST00000449372 IGFBPL1Q8WX77 278 aa10.4□□□□□ -0.74
SYNGAP1-204ENST00000449372 OOSP1A8MZH6 123 aa10.39□□□□□ -0.75
SYNGAP1-204ENST00000449372 ZNF672Q499Z4 452 aaPredicted RBP10.39□□□□□ -0.75
SYNGAP1-204ENST00000449372 SLC50A1Q9BRV3 221 aa10.39□□□□□ -0.75
SYNGAP1-204ENST00000449372 CD7P09564 240 aa10.39□□□□□ -0.75
SYNGAP1-204ENST00000449372 C10orf126Q8N4M7 172 aa10.39□□□□□ -0.75
SYNGAP1-204ENST00000449372 TRAV2A0A0B4J234 112 aa10.39□□□□□ -0.75
SYNGAP1-204ENST00000449372 J3KT08 172 aa10.39□□□□□ -0.75
SYNGAP1-204ENST00000449372 IGLV1-47P01700 117 aa10.39□□□□□ -0.75
SYNGAP1-204ENST00000449372 NAV3Q8IVL0 2385 aa10.39□□□□□ -0.75
SYNGAP1-204ENST00000449372 F5H768 121 aa10.39□□□□□ -0.75
SYNGAP1-204ENST00000449372 ZNF815PA8K554 130 aa10.38□□□□□ -0.75
SYNGAP1-204ENST00000449372 CRIP2P52943 208 aaPredicted RBP10.38□□□□□ -0.75
SYNGAP1-204ENST00000449372 RUSC1-AS1Q66K80 236 aa10.38□□□□□ -0.75
SYNGAP1-204ENST00000449372 FAM19A5Q7Z5A7 132 aaPredicted RBP10.38□□□□□ -0.75
SYNGAP1-204ENST00000449372 PRR25Q96S07 402 aa10.38□□□□□ -0.75
SYNGAP1-204ENST00000449372 PRORYQ9H606 182 aa10.38□□□□□ -0.75
SYNGAP1-204ENST00000449372 COX8CQ7Z4L0 72 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms