RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CDPF1Q6NVV7 123 aa19.14■□□□□ 0.65
CBX4-202ENST00000448310 EPM2AB3EWF7 344 aa19.13■□□□□ 0.65
CBX4-202ENST00000448310 C9JCJ5 164 aa19.13■□□□□ 0.65
CBX4-202ENST00000448310 M0R2P5 195 aa19.13■□□□□ 0.65
CBX4-202ENST00000448310 TYMSP04818 313 aa19.13■□□□□ 0.65
CBX4-202ENST00000448310 ACOT6Q3I5F7 207 aaPredicted RBP19.13■□□□□ 0.65
CBX4-202ENST00000448310 FAM74A1Q5RGS3 127 aa19.13■□□□□ 0.65
CBX4-202ENST00000448310 TXNDC17Q9BRA2 123 aa19.13■□□□□ 0.65
CBX4-202ENST00000448310 TRAV21A0A0B4J279 112 aa19.12■□□□□ 0.65
CBX4-202ENST00000448310 XGP55808 180 aa19.12■□□□□ 0.65
CBX4-202ENST00000448310 TREM1Q9NP99 234 aa19.12■□□□□ 0.65
CBX4-202ENST00000448310 A0A1W2PPV4 95 aa19.11■□□□□ 0.65
CBX4-202ENST00000448310 KRTAP10-1P60331 282 aa19.11■□□□□ 0.65
CBX4-202ENST00000448310 PQLC2Q6ZP29 291 aa19.11■□□□□ 0.65
CBX4-202ENST00000448310 SGK494Q96LW2 274 aa19.11■□□□□ 0.65
CBX4-202ENST00000448310 SDF2L1Q9HCN8 221 aa19.1■□□□□ 0.65
CBX4-202ENST00000448310 CRYGDP07320 174 aa19.09■□□□□ 0.65
CBX4-202ENST00000448310 K7EP13 123 aa19.08■□□□□ 0.64
CBX4-202ENST00000448310 NHLRC2Q8NBF2 726 aa19.08■□□□□ 0.64
CBX4-202ENST00000448310 OR10G9Q8NGN4 311 aa19.07■□□□□ 0.64
CBX4-202ENST00000448310 OR10G7Q8NGN6 311 aa19.07■□□□□ 0.64
CBX4-202ENST00000448310 ARL14EPLP0DKL9 152 aa19.06■□□□□ 0.64
CBX4-202ENST00000448310 GATA1P15976 413 aaPredicted RBP19.06■□□□□ 0.64
CBX4-202ENST00000448310 ARL6IP6Q8N6S5 226 aa19.06■□□□□ 0.64
CBX4-202ENST00000448310 ASB13Q8WXK3 278 aa19.06■□□□□ 0.64
CBX4-202ENST00000448310 A6NHS1 94 aa19.05■□□□□ 0.64
CBX4-202ENST00000448310 PPT1P50897 306 aa19.05■□□□□ 0.64
CBX4-202ENST00000448310 DEFA1P59665 94 aa19.05■□□□□ 0.64
CBX4-202ENST00000448310 DEFA3P59666 94 aa19.05■□□□□ 0.64
CBX4-202ENST00000448310 KCNS1Q96KK3 526 aa19.05■□□□□ 0.64
CBX4-202ENST00000448310 HERC1Q15751 4861 aa19.05■□□□□ 0.64
CBX4-202ENST00000448310 C10orf126Q8N4M7 172 aa19.04■□□□□ 0.64
CBX4-202ENST00000448310 C11orf21Q9P2W6 132 aa19.04■□□□□ 0.64
CBX4-202ENST00000448310 ZNF80P51504 273 aaPredicted RBP19.03■□□□□ 0.64
CBX4-202ENST00000448310 IGHV3-38A0A0C4DH36 116 aa19.02■□□□□ 0.64
CBX4-202ENST00000448310 FBLL1A6NHQ2 334 aaKnown RBP19.02■□□□□ 0.64
CBX4-202ENST00000448310 CDC34P49427 236 aaPredicted RBP19.02■□□□□ 0.64
CBX4-202ENST00000448310 DPPA3Q6W0C5 159 aa19.02■□□□□ 0.64
CBX4-202ENST00000448310 SH2D6Q7Z4S9 175 aa19.02■□□□□ 0.64
CBX4-202ENST00000448310 NDFIP1Q9BT67 221 aa19.02■□□□□ 0.64
CBX4-202ENST00000448310 VPS13BQ7Z7G8 4022 aa19.02■□□□□ 0.63
CBX4-202ENST00000448310 IGHV3-73A0A0B4J1V6 119 aa19.01■□□□□ 0.63
CBX4-202ENST00000448310 ZNF876PQ49A33 203 aa19.01■□□□□ 0.63
CBX4-202ENST00000448310 Q5VSD8 79 aa19.01■□□□□ 0.63
CBX4-202ENST00000448310 SLC25A29Q8N8R3 303 aa19.01■□□□□ 0.63
CBX4-202ENST00000448310 HSD17B11Q8NBQ5 300 aa19.01■□□□□ 0.63
CBX4-202ENST00000448310 TCRAP04437 139 aa19■□□□□ 0.63
CBX4-202ENST00000448310 STAG3L2P0CL84 134 aa19■□□□□ 0.63
CBX4-202ENST00000448310 STAG3L3P0CL85 134 aa19■□□□□ 0.63
CBX4-202ENST00000448310 INAFM2P0DMQ5 153 aa19■□□□□ 0.63
CBX4-202ENST00000448310 GCSHP23434 173 aa19■□□□□ 0.63
CBX4-202ENST00000448310 TIRAPP58753 221 aa19■□□□□ 0.63
CBX4-202ENST00000448310 TMEM75Q8N9X5 138 aa19■□□□□ 0.63
CBX4-202ENST00000448310 CFAP126Q5VTH2 177 aa18.99■□□□□ 0.63
CBX4-202ENST00000448310 C5orf17Q8NAS9 161 aa18.99■□□□□ 0.63
CBX4-202ENST00000448310 RS1O15537 224 aa18.98■□□□□ 0.63
CBX4-202ENST00000448310 PSCAO43653 123 aa18.98■□□□□ 0.63
CBX4-202ENST00000448310 GCGP01275 180 aa18.98■□□□□ 0.63
CBX4-202ENST00000448310 GCHFRP30047 84 aa18.98■□□□□ 0.63
CBX4-202ENST00000448310 LINC01556Q5JQF7 62 aa18.98■□□□□ 0.63
CBX4-202ENST00000448310 RAB24Q969Q5 203 aa18.98■□□□□ 0.63
CBX4-202ENST00000448310 PSG8Q9UQ74 426 aa18.98■□□□□ 0.63
CBX4-202ENST00000448310 SERTM2A0A1B0GWG4 89 aa18.97■□□□□ 0.63
CBX4-202ENST00000448310 HAMPP81172 84 aa18.97■□□□□ 0.63
CBX4-202ENST00000448310 OR10J3Q5JRS4 329 aa18.97■□□□□ 0.63
CBX4-202ENST00000448310 OR2G3Q8NGZ4 309 aa18.97■□□□□ 0.63
CBX4-202ENST00000448310 FRZBQ92765 325 aa18.97■□□□□ 0.63
CBX4-202ENST00000448310 ALG5Q9Y673 324 aa18.97■□□□□ 0.63
CBX4-202ENST00000448310 LRCOL1A6NCL2 159 aa18.96■□□□□ 0.63
CBX4-202ENST00000448310 SMR3BP02814 79 aaPredicted RBP18.96■□□□□ 0.63
CBX4-202ENST00000448310 PFN1P07737 140 aaKnown RBP18.96■□□□□ 0.63
CBX4-202ENST00000448310 RHOHQ15669 191 aa18.96■□□□□ 0.63
CBX4-202ENST00000448310 C9orf85Q96MD7 179 aa18.96■□□□□ 0.63
CBX4-202ENST00000448310 PRADC1Q9BSG0 188 aa18.96■□□□□ 0.63
CBX4-202ENST00000448310 Q9HAA7 133 aa18.96■□□□□ 0.63
CBX4-202ENST00000448310 TRAV8-6A0A0B4J262 113 aa18.95■□□□□ 0.62
CBX4-202ENST00000448310 PGPEP1LA6NFU8 196 aa18.95■□□□□ 0.62
CBX4-202ENST00000448310 TAAR5O14804 337 aa18.95■□□□□ 0.62
CBX4-202ENST00000448310 IGLV2-11P01706 119 aa18.95■□□□□ 0.62
CBX4-202ENST00000448310 IGHV3-30P01768 117 aa18.95■□□□□ 0.62
CBX4-202ENST00000448310 IGHV3-33P01772 117 aa18.95■□□□□ 0.62
CBX4-202ENST00000448310 IGHV3-30-3P0DP02 117 aa18.95■□□□□ 0.62
CBX4-202ENST00000448310 IGHV3-30-5P0DP03 117 aa18.95■□□□□ 0.62
CBX4-202ENST00000448310 ATP6V0CP27449 155 aa18.95■□□□□ 0.62
CBX4-202ENST00000448310 PRNTQ86SH4 94 aa18.95■□□□□ 0.62
CBX4-202ENST00000448310 SUN5Q8TC36 379 aa18.95■□□□□ 0.62
CBX4-202ENST00000448310 IGLV5-52A0A0A0MRZ9 124 aa18.94■□□□□ 0.62
CBX4-202ENST00000448310 TRBV6-4A0A1B0GX49 114 aa18.94■□□□□ 0.62
CBX4-202ENST00000448310 IBA57-AS1B1ANH7 110 aa18.94■□□□□ 0.62
CBX4-202ENST00000448310 GGTLC3B5MD39 225 aa18.94■□□□□ 0.62
CBX4-202ENST00000448310 K7EQM0 130 aa18.94■□□□□ 0.62
CBX4-202ENST00000448310 SUMO1P63165 101 aaKnown RBP18.94■□□□□ 0.62
CBX4-202ENST00000448310 ZNF506Q5JVG8 444 aa18.94■□□□□ 0.62
CBX4-202ENST00000448310 DMBT1Q9UGM3 2413 aaPredicted RBP18.94■□□□□ 0.62
CBX4-202ENST00000448310 FLI1Q01543 452 aaPredicted RBP18.93■□□□□ 0.62
CBX4-202ENST00000448310 PSMG3Q9BT73 122 aaPredicted RBP18.93■□□□□ 0.62
CBX4-202ENST00000448310 EPDR1Q9UM22 224 aa18.93■□□□□ 0.62
CBX4-202ENST00000448310 RNASE3P12724 160 aaKnown RBP18.92■□□□□ 0.62
CBX4-202ENST00000448310 SMUG1Q53HV7 270 aa18.92■□□□□ 0.62
CBX4-202ENST00000448310 SH3BGRL3Q9H299 93 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms