RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 TYMSP04818 313 aa14.18□□□□□ -0.14
SDC1-205ENST00000447124 SPATA12Q7Z6I5 190 aa14.18□□□□□ -0.14
SDC1-205ENST00000447124 BTF3P20290 206 aaKnown RBP14.17□□□□□ -0.14
SDC1-205ENST00000447124 ZNF80P51504 273 aaPredicted RBP14.17□□□□□ -0.14
SDC1-205ENST00000447124 LINC00315P59091 139 aa14.17□□□□□ -0.14
SDC1-205ENST00000447124 SERF2P84101 59 aa14.17□□□□□ -0.14
SDC1-205ENST00000447124 Q6ZRN7 208 aaPredicted RBP14.17□□□□□ -0.14
SDC1-205ENST00000447124 C11orf21Q9P2W6 132 aa14.17□□□□□ -0.14
SDC1-205ENST00000447124 K7EQD1 137 aa14.16□□□□□ -0.14
SDC1-205ENST00000447124 TCRAP04437 139 aa14.16□□□□□ -0.14
SDC1-205ENST00000447124 GIPP09681 153 aaPredicted RBP14.16□□□□□ -0.14
SDC1-205ENST00000447124 KRTAP10-2P60368 255 aa14.16□□□□□ -0.14
SDC1-205ENST00000447124 NEGR1Q7Z3B1 354 aa14.16□□□□□ -0.14
SDC1-205ENST00000447124 TNFRSF18Q9Y5U5 241 aa14.16□□□□□ -0.14
SDC1-205ENST00000447124 TRAV4A0A0B4J268 109 aa14.15□□□□□ -0.14
SDC1-205ENST00000447124 RNF222A6NCQ9 220 aa14.15□□□□□ -0.14
SDC1-205ENST00000447124 M0R2P5 195 aa14.15□□□□□ -0.14
SDC1-205ENST00000447124 IGLV2-11P01706 119 aa14.15□□□□□ -0.14
SDC1-205ENST00000447124 MBP02144 154 aa14.15□□□□□ -0.14
SDC1-205ENST00000447124 SUMO1P63165 101 aaKnown RBP14.15□□□□□ -0.14
SDC1-205ENST00000447124 RPL7L1Q6DKI1 246 aaKnown RBP14.15□□□□□ -0.14
SDC1-205ENST00000447124 C5orf17Q8NAS9 161 aa14.15□□□□□ -0.14
SDC1-205ENST00000447124 TNFSF18Q9UNG2 199 aa14.15□□□□□ -0.14
SDC1-205ENST00000447124 PSG8Q9UQ74 426 aa14.15□□□□□ -0.14
SDC1-205ENST00000447124 GYPEP15421 78 aa14.14□□□□□ -0.15
SDC1-205ENST00000447124 OR4C5Q8NGB2 326 aa14.14□□□□□ -0.15
SDC1-205ENST00000447124 GGTLC3B5MD39 225 aa14.13□□□□□ -0.15
SDC1-205ENST00000447124 ACTR3CQ9C0K3 210 aaPredicted RBP14.13□□□□□ -0.15
SDC1-205ENST00000447124 SDF2L1Q9HCN8 221 aa14.13□□□□□ -0.15
SDC1-205ENST00000447124 EPDR1Q9UM22 224 aa14.13□□□□□ -0.15
SDC1-205ENST00000447124 LOC100131303A0A0U1RQF7 123 aa14.12□□□□□ -0.15
SDC1-205ENST00000447124 SERTM2A0A1B0GWG4 89 aa14.12□□□□□ -0.15
SDC1-205ENST00000447124 CXorf1O96002 111 aa14.12□□□□□ -0.15
SDC1-205ENST00000447124 ZNF726P1Q15940 193 aa14.12□□□□□ -0.15
SDC1-205ENST00000447124 KCNS1Q96KK3 526 aa14.12□□□□□ -0.15
SDC1-205ENST00000447124 TMEM167BQ9NRX6 74 aa14.12□□□□□ -0.15
SDC1-205ENST00000447124 FXYD6-FXYD2A0A087WZ82 144 aa14.11□□□□□ -0.15
SDC1-205ENST00000447124 G3V3Q6 166 aa14.11□□□□□ -0.15
SDC1-205ENST00000447124 CDK2AP2O75956 126 aa14.11□□□□□ -0.15
SDC1-205ENST00000447124 SRIP30626 198 aa14.11□□□□□ -0.15
SDC1-205ENST00000447124 DPPA3Q6W0C5 159 aa14.11□□□□□ -0.15
SDC1-205ENST00000447124 INO80EQ8NBZ0 244 aaPredicted RBP14.11□□□□□ -0.15
SDC1-205ENST00000447124 ASB13Q8WXK3 278 aa14.11□□□□□ -0.15
SDC1-205ENST00000447124 GCGP01275 180 aa14.1□□□□□ -0.15
SDC1-205ENST00000447124 ORM1P02763 201 aa14.1□□□□□ -0.15
SDC1-205ENST00000447124 FLI1Q01543 452 aaPredicted RBP14.1□□□□□ -0.15
SDC1-205ENST00000447124 PRNTQ86SH4 94 aa14.1□□□□□ -0.15
SDC1-205ENST00000447124 WFDC10BQ8IUB3 73 aa14.1□□□□□ -0.15
SDC1-205ENST00000447124 TMEM75Q8N9X5 138 aa14.1□□□□□ -0.15
SDC1-205ENST00000447124 LINC00479Q96M42 142 aa14.1□□□□□ -0.15
SDC1-205ENST00000447124 NDFIP1Q9BT67 221 aa14.1□□□□□ -0.15
SDC1-205ENST00000447124 C9JCJ5 164 aa14.09□□□□□ -0.15
SDC1-205ENST00000447124 TAAR5O14804 337 aa14.09□□□□□ -0.15
SDC1-205ENST00000447124 GATA1P15976 413 aaPredicted RBP14.09□□□□□ -0.15
SDC1-205ENST00000447124 OR2T35Q8NGX2 323 aa14.09□□□□□ -0.15
SDC1-205ENST00000447124 A0A1W2PRE2 83 aa14.08□□□□□ -0.16
SDC1-205ENST00000447124 K7EQM0 130 aa14.08□□□□□ -0.16
SDC1-205ENST00000447124 CYB561D1Q8N8Q1 229 aa14.08□□□□□ -0.16
SDC1-205ENST00000447124 PCNPQ8WW12 178 aaKnown RBP14.08□□□□□ -0.16
SDC1-205ENST00000447124 BORCS7-ASMTA0A0B4J1R7 106 aa14.07□□□□□ -0.16
SDC1-205ENST00000447124 TRAV34A0A0B4J273 112 aa14.07□□□□□ -0.16
SDC1-205ENST00000447124 RS1O15537 224 aa14.07□□□□□ -0.16
SDC1-205ENST00000447124 PFN1P07737 140 aaKnown RBP14.07□□□□□ -0.16
SDC1-205ENST00000447124 SMUG1Q53HV7 270 aa14.07□□□□□ -0.16
SDC1-205ENST00000447124 C9orf85Q96MD7 179 aa14.07□□□□□ -0.16
SDC1-205ENST00000447124 LY96Q9Y6Y9 160 aa14.07□□□□□ -0.16
SDC1-205ENST00000447124 PGPEP1LA6NFU8 196 aa14.06□□□□□ -0.16
SDC1-205ENST00000447124 FUSP35637 526 aaKnown RBP eCLIP14.06□□□□□ -0.162e-6■■□□□ 12.3
SDC1-205ENST00000447124 ZNF876PQ49A33 203 aa14.06□□□□□ -0.16
SDC1-205ENST00000447124 CFAP126Q5VTH2 177 aa14.06□□□□□ -0.16
SDC1-205ENST00000447124 TXNDC17Q9BRA2 123 aa14.06□□□□□ -0.16
SDC1-205ENST00000447124 CYTL1Q9NRR1 136 aa14.06□□□□□ -0.16
SDC1-205ENST00000447124 CTXND1A0A1B0GTU2 59 aa14.05□□□□□ -0.16
SDC1-205ENST00000447124 RNASE3P12724 160 aaKnown RBP14.05□□□□□ -0.16
SDC1-205ENST00000447124 FGF8P55075 233 aaPredicted RBP14.05□□□□□ -0.16
SDC1-205ENST00000447124 UBE2G2P60604 165 aa14.05□□□□□ -0.16
SDC1-205ENST00000447124 IGHV3-73A0A0B4J1V6 119 aa14.04□□□□□ -0.16
SDC1-205ENST00000447124 IGKV3D-20A0A0C4DH25 116 aa14.04□□□□□ -0.16
SDC1-205ENST00000447124 FBLL1A6NHQ2 334 aaKnown RBP14.04□□□□□ -0.16
SDC1-205ENST00000447124 DNAH10OSP0CZ25 163 aa14.04□□□□□ -0.16
SDC1-205ENST00000447124 SAPCD1Q5SSQ6 148 aa14.04□□□□□ -0.16
SDC1-205ENST00000447124 SLC25A29Q8N8R3 303 aa14.04□□□□□ -0.16
SDC1-205ENST00000447124 PTH2Q96A98 100 aa14.04□□□□□ -0.16
SDC1-205ENST00000447124 TRAV9-2A0A087WT02 112 aa14.03□□□□□ -0.16
SDC1-205ENST00000447124 ZNF506Q5JVG8 444 aa14.03□□□□□ -0.16
SDC1-205ENST00000447124 FAM74A7A6NL05 159 aa14.02□□□□□ -0.17
SDC1-205ENST00000447124 TIRAPP58753 221 aa14.02□□□□□ -0.17
SDC1-205ENST00000447124 MAPKAPK5-AS1Q8N8E1 139 aa14.02□□□□□ -0.17
SDC1-205ENST00000447124 MSRB1Q9NZV6 116 aa14.02□□□□□ -0.17
SDC1-205ENST00000447124 ARL2-SNX15V9GYD0 113 aa14.02□□□□□ -0.17
SDC1-205ENST00000447124 SMLR1H3BR10 107 aa14.01□□□□□ -0.17
SDC1-205ENST00000447124 ARPC5O15511 151 aa14.01□□□□□ -0.17
SDC1-205ENST00000447124 IFNA7P01567 189 aa14.01□□□□□ -0.17
SDC1-205ENST00000447124 EVI2AP22794 236 aa14.01□□□□□ -0.17
SDC1-205ENST00000447124 CRIP1P50238 77 aa14.01□□□□□ -0.17
SDC1-205ENST00000447124 RGS21Q2M5E4 152 aa14.01□□□□□ -0.17
SDC1-205ENST00000447124 ZFP69Q49AA0 526 aa14.01□□□□□ -0.17
SDC1-205ENST00000447124 AKR1C8PQ5T2L2 129 aa14.01□□□□□ -0.17
SDC1-205ENST00000447124 SH2D6Q7Z4S9 175 aa14.01□□□□□ -0.17
SDC1-205ENST00000447124 NFE4Q86UQ8 179 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms