RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 YPEL3P61236 119 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 PKIAP61925 76 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 DEFA6Q01524 100 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 WT1-ASQ06250 92 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 LOXL1Q08397 574 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 JOSD1Q15040 202 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 USF2Q15853 346 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 PRSS8Q16651 343 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 CLEC12BQ2HXU8 276 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 C10orf55Q5SWW7 151 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 IBA57Q5T440 356 aaKnown RBP2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 LINC00305Q7Z4B0 112 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 OR10W1Q8NGF6 305 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 CMTM2Q8TAZ6 248 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 LINC01560Q8TB33 94 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 ZNF502Q8TBZ5 544 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 SMIM12Q96EX1 92 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 SLC25A2Q9BXI2 301 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 GNB1LQ9BYB4 327 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 CBLN4Q9NTU7 201 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 GOLT1BQ9Y3E0 138 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 SPTBN2O15020 2390 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 ROS1P08922 2347 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 PCNX1Q96RV3 2341 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 TNCP24821 2201 aa2.52□□□□□ -2.01
HMGB3P6-201ENST00000444896 TLN1Q9Y490 2541 aaKnown RBP2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 CEP295Q9C0D2 2601 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 POLEQ07864 2286 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 TRBV20OR9-2A0A075B6H5 130 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 IGLV1-50A0A075B6I6 118 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 IGHV3-72A0A0B4J1Y9 119 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 IGLC7A0M8Q6 106 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 LINC00587B1AMM8 73 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 K7EN84 100 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 SLC17A3O00476 420 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 ZNF207O43670 478 aaKnown RBP2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 GATCO43716 136 aaKnown RBP2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 HYPMO75409 117 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 CNIH1O95406 144 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 SLC25A5P05141 298 aaKnown RBP2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 REG1AP05451 166 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 CRYGCP07315 174 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 SFTPCP11686 197 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 ORM2P19652 201 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 HTR1DP28221 377 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 S100A7P31151 101 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 KRTAP10-10P60014 251 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 RAB4BP61018 213 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 RANP62826 216 aaKnown RBP2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 PAFAH1B2P68402 229 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 DIAPH2-AS1Q14236 149 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 MMDQ15546 238 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 MRPL23Q16540 153 aaKnown RBP2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 TPTE2P1Q5T6R2 138 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 HCP5Q6MZN7 132 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 RASL11AQ6T310 242 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 FAM231DQ6ZW35 169 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 ATP5L2Q7Z4Y8 100 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 BAGE3Q86Y29 109 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 BAGE2Q86Y30 109 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 OR8I2Q8N0Y5 310 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 FMC1Q96HJ9 113 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 FAM167A-AS1Q96KT0 104 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 IGF2BP2-AS1Q96M15 143 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 SAMD10Q9BYL1 202 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 NAT8BQ9UHF3 227 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 HIGD1AQ9Y241 93 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 SIGLEC9Q9Y336 463 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 V9GYV3 84 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 ARFGEF3Q5TH69 2177 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 DMXL1Q9Y485 3027 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 TPRP12270 2363 aaKnown RBP2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 NAV3Q8IVL0 2385 aa2.51□□□□□ -2.01
HMGB3P6-201ENST00000444896 FRYQ5TBA9 3013 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 DSPP15924 2871 aaKnown RBP2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 IGKV1D-37A0A075B6S9 117 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 TRAV30A0A087WSZ9 112 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 TRAV5A0A0B4J249 113 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 SMIM27A0A1W2PRY6 76 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 IZUMO1RA6ND01 250 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 OOSP1A8MZH6 123 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 E7EUB6 86 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 LYNX1G3V0Z9 82 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 FCN3O75636 299 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 NBEAP1P0C6P0 100 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 RD3LP0DJH9 198 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 LYNX1P0DP58 116 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 PYYP10082 97 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 ESDP10768 282 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 CBLN1P23435 193 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 COL8A2P25067 703 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 DDTP30046 118 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 KRTAP10-1P60331 282 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 Q0VG73 95 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 HES1Q14469 280 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 FXYD3Q14802 87 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 LY6EQ16553 131 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 OR10J3Q5JRS4 329 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 FAM162BQ5T6X4 162 aa2.5□□□□□ -2.01
HMGB3P6-201ENST00000444896 MINOS1Q5TGZ0 78 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms