RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TCTE3Q8IZS6 198 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 TVP23CQ96ET8 276 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 MAP1LC3BQ9GZQ8 125 aa7.52□□□□□ -1.21
SF3A1-203ENST00000444440 ABCA13Q86UQ4 5058 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 A0A096LPF7 62 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 TRAV8-1A0A0A6YYK1 113 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 F6UZH7 168 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 IGHV3-53P01767 116 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 TPT1P13693 172 aaKnown RBP7.51□□□□□ -1.21
SF3A1-203ENST00000444440 PPT1P50897 306 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 FGF8P55075 233 aaPredicted RBP7.51□□□□□ -1.21
SF3A1-203ENST00000444440 TNP2Q05952 138 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 SAPCD1Q5SSQ6 148 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 EIF5AL1Q6IS14 154 aaKnown RBP7.51□□□□□ -1.21
SF3A1-203ENST00000444440 DPPA3Q6W0C5 159 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 ZNF575Q86XF7 245 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 CYB561D1Q8N8Q1 229 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 C18orf15Q96N68 181 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 MDFICQ9P1T7 246 aa7.51□□□□□ -1.21
SF3A1-203ENST00000444440 TRGV11A0A075B6L2 103 aa7.5□□□□□ -1.21
SF3A1-203ENST00000444440 TRGV2A0A075B6R0 118 aa7.5□□□□□ -1.21
SF3A1-203ENST00000444440 TRAV21A0A0B4J279 112 aa7.5□□□□□ -1.21
SF3A1-203ENST00000444440 CCL18P55774 89 aa7.5□□□□□ -1.21
SF3A1-203ENST00000444440 UBE2G2P60604 165 aa7.5□□□□□ -1.21
SF3A1-203ENST00000444440 ZNF415Q09FC8 603 aa7.5□□□□□ -1.21
SF3A1-203ENST00000444440 LGALSLQ3ZCW2 172 aaPredicted RBP7.5□□□□□ -1.21
SF3A1-203ENST00000444440 ZFP69Q49AA0 526 aa7.5□□□□□ -1.21
SF3A1-203ENST00000444440 TMEM75Q8N9X5 138 aa7.5□□□□□ -1.21
SF3A1-203ENST00000444440 SFT2D1Q8WV19 159 aa7.5□□□□□ -1.21
SF3A1-203ENST00000444440 HIST1H2BAQ96A08 127 aa7.5□□□□□ -1.21
SF3A1-203ENST00000444440 KCNS1Q96KK3 526 aa7.5□□□□□ -1.21
SF3A1-203ENST00000444440 PSG8Q9UQ74 426 aa7.5□□□□□ -1.21
SF3A1-203ENST00000444440 FAM74A7A6NL05 159 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 GGTLC3B5MD39 225 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 H3BNG1 76 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 C1QBP02746 253 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 FHITP49789 147 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 FLI1Q01543 452 aaPredicted RBP7.49□□□□□ -1.21
SF3A1-203ENST00000444440 SMUG1Q53HV7 270 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 PRNTQ86SH4 94 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 AKAP14Q86UN6 197 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 FAM213BQ8TBF2 198 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 MBD3L1Q8WWY6 194 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 SGK494Q96LW2 274 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 TCEAL7Q9BRU2 100 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 SPXQ9BT56 116 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 Q9H8V8 135 aa7.49□□□□□ -1.21
SF3A1-203ENST00000444440 TEX46H3BTG2 121 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 H2AFB1P0C5Y9 115 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 SFTA3P0C7M3 94 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 RAB5CP51148 216 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 FHL2Q14192 279 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 TMEM183BQ1AE95 376 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 TDRG1Q3Y452 100 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 CST9LP1Q5W188 147 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 TMEM183AQ8IXX5 376 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 C6orf223Q8N319 242 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 UPK3BQ9BT76 320 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 SDF2L1Q9HCN8 221 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 NAGKQ9UJ70 344 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 MRPS16Q9Y3D3 137 aaKnown RBP7.48□□□□□ -1.21
SF3A1-203ENST00000444440 ARL2-SNX15V9GYD0 113 aa7.48□□□□□ -1.21
SF3A1-203ENST00000444440 PEX7O00628 323 aa7.47□□□□□ -1.21
SF3A1-203ENST00000444440 GNRH2O43555 120 aa7.47□□□□□ -1.21
SF3A1-203ENST00000444440 ZNF80P51504 273 aaPredicted RBP7.47□□□□□ -1.21
SF3A1-203ENST00000444440 ZNF479Q96JC4 524 aa7.47□□□□□ -1.21
SF3A1-203ENST00000444440 C8orf49Q96NF6 230 aa7.47□□□□□ -1.21
SF3A1-203ENST00000444440 C11orf21Q9P2W6 132 aa7.47□□□□□ -1.21
SF3A1-203ENST00000444440 hCG_2014768A0A024R1R8 64 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 TRAV34A0A0B4J273 112 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 FABP5P3A8MUU1 101 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 GCGP01275 180 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 IGLV2-11P01706 119 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 TYMSP04818 313 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 PFN1P07737 140 aaKnown RBP7.46□□□□□ -1.22
SF3A1-203ENST00000444440 CRYBA4P53673 196 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 UBE2G1P62253 170 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 SLAQ13239 276 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 SOHLH1Q5JUK2 328 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 SLC51BQ86UW2 128 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 FMC1Q96HJ9 113 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 ZFP30Q9Y2G7 519 aa7.46□□□□□ -1.22
SF3A1-203ENST00000444440 IGHV3-16A0A0C4DH30 117 aa7.45□□□□□ -1.22
SF3A1-203ENST00000444440 PAX4O43316 350 aa7.45□□□□□ -1.22
SF3A1-203ENST00000444440 PAGE4O60829 102 aa7.45□□□□□ -1.22
SF3A1-203ENST00000444440 S100A9P06702 114 aaKnown RBP7.45□□□□□ -1.22
SF3A1-203ENST00000444440 RASL10AQ92737 203 aa7.45□□□□□ -1.22
SF3A1-203ENST00000444440 LINC00479Q96M42 142 aa7.45□□□□□ -1.22
SF3A1-203ENST00000444440 PRO0255Q9UI72 69 aa7.45□□□□□ -1.22
SF3A1-203ENST00000444440 A0A1B0GV50 99 aa7.44□□□□□ -1.22
SF3A1-203ENST00000444440 M0R2P5 195 aa7.44□□□□□ -1.22
SF3A1-203ENST00000444440 MED14OSP0DP75 135 aa7.44□□□□□ -1.22
SF3A1-203ENST00000444440 HHLA3Q9XRX5 114 aa7.44□□□□□ -1.22
SF3A1-203ENST00000444440 ICOSQ9Y6W8 199 aa7.44□□□□□ -1.22
SF3A1-203ENST00000444440 DNAH8Q96JB1 4490 aa7.43□□□□□ -1.22
SF3A1-203ENST00000444440 TRAV1-1A0A0B4J248 108 aa7.43□□□□□ -1.22
SF3A1-203ENST00000444440 TRGV4A0A0C4DH28 118 aa7.43□□□□□ -1.22
SF3A1-203ENST00000444440 TRBV6-1A0A0K0K1D8 114 aa7.43□□□□□ -1.22
SF3A1-203ENST00000444440 LOC100131303A0A0U1RQF7 123 aa7.43□□□□□ -1.22
SF3A1-203ENST00000444440 K7EQD1 137 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms