RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 LAGE3Q14657 143 aa13.54□□□□□ -0.24
TMEM50B-204ENST00000442441 SEC22CQ9BRL7 303 aa13.54□□□□□ -0.24
TMEM50B-204ENST00000442441 IL7P13232 177 aa13.53□□□□□ -0.24
TMEM50B-204ENST00000442441 LELP1Q5T871 98 aa13.53□□□□□ -0.24
TMEM50B-204ENST00000442441 SLC25A29Q8N8R3 303 aa13.53□□□□□ -0.24
TMEM50B-204ENST00000442441 FBLL1A6NHQ2 334 aaKnown RBP13.52□□□□□ -0.25
TMEM50B-204ENST00000442441 DIRC3C9JPN6 131 aa13.52□□□□□ -0.25
TMEM50B-204ENST00000442441 OR7C2O60412 319 aa13.52□□□□□ -0.25
TMEM50B-204ENST00000442441 TMED6Q8WW62 240 aa13.52□□□□□ -0.25
TMEM50B-204ENST00000442441 TRAV6A0A075B6T7 132 aa13.51□□□□□ -0.25
TMEM50B-204ENST00000442441 NHLH2Q02577 135 aa13.51□□□□□ -0.25
TMEM50B-204ENST00000442441 PRADC1Q9BSG0 188 aa13.51□□□□□ -0.25
TMEM50B-204ENST00000442441 KCNIP2Q9NS61 270 aa13.51□□□□□ -0.25
TMEM50B-204ENST00000442441 PLA2G10O15496 165 aa13.5□□□□□ -0.25
TMEM50B-204ENST00000442441 TCRBP04435 133 aa13.5□□□□□ -0.25
TMEM50B-204ENST00000442441 TYMSP04818 313 aa13.5□□□□□ -0.25
TMEM50B-204ENST00000442441 UBE2L3P68036 154 aaKnown RBP13.5□□□□□ -0.25
TMEM50B-204ENST00000442441 RHOHQ15669 191 aa13.5□□□□□ -0.25
TMEM50B-204ENST00000442441 OR5C1Q8NGR4 320 aa13.5□□□□□ -0.25
TMEM50B-204ENST00000442441 FAT3Q8TDW7 4589 aa13.5□□□□□ -0.25
TMEM50B-204ENST00000442441 TRAV21A0A0B4J279 112 aa13.49□□□□□ -0.25
TMEM50B-204ENST00000442441 TRBV6-4A0A1B0GX49 114 aa13.49□□□□□ -0.25
TMEM50B-204ENST00000442441 LECT2O14960 151 aa13.49□□□□□ -0.25
TMEM50B-204ENST00000442441 SCXQ7RTU7 201 aa13.49□□□□□ -0.25
TMEM50B-204ENST00000442441 SDF2L1Q9HCN8 221 aa13.49□□□□□ -0.25
TMEM50B-204ENST00000442441 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.48□□□□□ -0.25
TMEM50B-204ENST00000442441 LYRM1O43325 122 aa13.48□□□□□ -0.25
TMEM50B-204ENST00000442441 HYLS1Q96M11 299 aa13.48□□□□□ -0.25
TMEM50B-204ENST00000442441 ATP5SQ99766 215 aa13.48□□□□□ -0.25
TMEM50B-204ENST00000442441 GTSF1LQ9H1H1 148 aa13.48□□□□□ -0.25
TMEM50B-204ENST00000442441 NUDT15Q9NV35 164 aa13.48□□□□□ -0.25
TMEM50B-204ENST00000442441 CIDEAO60543 219 aa13.47□□□□□ -0.25
TMEM50B-204ENST00000442441 OXTP01178 125 aa13.47□□□□□ -0.25
TMEM50B-204ENST00000442441 KRTAP10-4P60372 401 aaPredicted RBP13.47□□□□□ -0.25
TMEM50B-204ENST00000442441 ZNF876PQ49A33 203 aa13.47□□□□□ -0.25
TMEM50B-204ENST00000442441 CFAP126Q5VTH2 177 aa13.47□□□□□ -0.25
TMEM50B-204ENST00000442441 ATP6V0E2Q8NHE4 81 aa13.47□□□□□ -0.25
TMEM50B-204ENST00000442441 KCNS1Q96KK3 526 aa13.47□□□□□ -0.25
TMEM50B-204ENST00000442441 WDR61Q9GZS3 305 aaKnown RBP13.47□□□□□ -0.25
TMEM50B-204ENST00000442441 RBM38Q9H0Z9 239 aaKnown RBP13.47□□□□□ -0.25
TMEM50B-204ENST00000442441 TRAV8-3A0A0A6YYJ7 113 aa13.46□□□□□ -0.25
TMEM50B-204ENST00000442441 RS1O15537 224 aa13.46□□□□□ -0.25
TMEM50B-204ENST00000442441 LINC01620Q4KN68 170 aa13.46□□□□□ -0.25
TMEM50B-204ENST00000442441 Q8N3U1 123 aa13.46□□□□□ -0.25
TMEM50B-204ENST00000442441 PLA2G2DQ9UNK4 145 aa13.46□□□□□ -0.25
TMEM50B-204ENST00000442441 C17orf112F2Z3M2 114 aa13.45□□□□□ -0.26
TMEM50B-204ENST00000442441 F6UZH7 168 aa13.45□□□□□ -0.26
TMEM50B-204ENST00000442441 DPPA3Q6W0C5 159 aa13.45□□□□□ -0.26
TMEM50B-204ENST00000442441 CMTM2Q8TAZ6 248 aa13.45□□□□□ -0.26
TMEM50B-204ENST00000442441 ASB13Q8WXK3 278 aa13.45□□□□□ -0.26
TMEM50B-204ENST00000442441 OTORQ9NRC9 128 aa13.45□□□□□ -0.26
TMEM50B-204ENST00000442441 RPH3ALQ9UNE2 315 aa13.45□□□□□ -0.26
TMEM50B-204ENST00000442441 IGHV3-73A0A0B4J1V6 119 aa13.44□□□□□ -0.26
TMEM50B-204ENST00000442441 KHDC3LQ587J8 217 aa13.44□□□□□ -0.26
TMEM50B-204ENST00000442441 TVP23CQ96ET8 276 aa13.44□□□□□ -0.26
TMEM50B-204ENST00000442441 CHAC1Q9BUX1 264 aa13.44□□□□□ -0.26
TMEM50B-204ENST00000442441 TREM1Q9NP99 234 aa13.44□□□□□ -0.26
TMEM50B-204ENST00000442441 PGPA6NDG6 321 aa13.43□□□□□ -0.26
TMEM50B-204ENST00000442441 TOR2AQ5JU69 321 aa13.43□□□□□ -0.26
TMEM50B-204ENST00000442441 GOLT1AQ6ZVE7 132 aa13.43□□□□□ -0.26
TMEM50B-204ENST00000442441 BAALCQ8WXS3 180 aa13.43□□□□□ -0.26
TMEM50B-204ENST00000442441 NMES1Q9C002 83 aa13.43□□□□□ -0.26
TMEM50B-204ENST00000442441 H2AFB2P0C5Z0 115 aa13.42□□□□□ -0.26
TMEM50B-204ENST00000442441 MGST1P10620 155 aaKnown RBP13.42□□□□□ -0.26
TMEM50B-204ENST00000442441 TAS2R45P59539 299 aa13.42□□□□□ -0.26
TMEM50B-204ENST00000442441 ASAH1Q13510 395 aa13.42□□□□□ -0.26
TMEM50B-204ENST00000442441 FAM74A1Q5RGS3 127 aa13.42□□□□□ -0.26
TMEM50B-204ENST00000442441 DAZ4Q86SG3 579 aaKnown RBP13.42□□□□□ -0.26
TMEM50B-204ENST00000442441 SH3BGRL3Q9H299 93 aa13.42□□□□□ -0.26
TMEM50B-204ENST00000442441 DAZ3Q9NR90 486 aaKnown RBP13.42□□□□□ -0.26
TMEM50B-204ENST00000442441 COX11Q9Y6N1 276 aa13.42□□□□□ -0.26
TMEM50B-204ENST00000442441 TRAV8-1A0A0A6YYK1 113 aa13.41□□□□□ -0.26
TMEM50B-204ENST00000442441 RBFOX3A6NFN3 312 aa13.41□□□□□ -0.26
TMEM50B-204ENST00000442441 FFAR4Q5NUL3 377 aa13.41□□□□□ -0.26
TMEM50B-204ENST00000442441 MBD2Q9UBB5 411 aa13.41□□□□□ -0.26
TMEM50B-204ENST00000442441 GGTLC3B5MD39 225 aa13.4□□□□□ -0.26
TMEM50B-204ENST00000442441 ARL6IP6Q8N6S5 226 aa13.4□□□□□ -0.26
TMEM50B-204ENST00000442441 OR5AC2Q9NZP5 309 aa13.4□□□□□ -0.26
TMEM50B-204ENST00000442441 Q8N976 141 aa13.39□□□□□ -0.27
TMEM50B-204ENST00000442441 CIRBP-AS1Q8TBR5 109 aa13.39□□□□□ -0.27
TMEM50B-204ENST00000442441 C9orf85Q96MD7 179 aa13.39□□□□□ -0.27
TMEM50B-204ENST00000442441 PGPEP1LA6NFU8 196 aa13.38□□□□□ -0.27
TMEM50B-204ENST00000442441 EIF3GO75821 320 aaKnown RBP eCLIP13.38□□□□□ -0.27
TMEM50B-204ENST00000442441 ZNF506Q5JVG8 444 aa13.38□□□□□ -0.27
TMEM50B-204ENST00000442441 PTH2Q96A98 100 aa13.38□□□□□ -0.27
TMEM50B-204ENST00000442441 C11orf21Q9P2W6 132 aa13.38□□□□□ -0.27
TMEM50B-204ENST00000442441 RNF222A6NCQ9 220 aa13.37□□□□□ -0.27
TMEM50B-204ENST00000442441 H0YIZ8 118 aa13.37□□□□□ -0.27
TMEM50B-204ENST00000442441 ACOT6Q3I5F7 207 aaPredicted RBP13.37□□□□□ -0.27
TMEM50B-204ENST00000442441 LRRC37A5PQ49AS3 106 aa13.37□□□□□ -0.27
TMEM50B-204ENST00000442441 RMI2Q96E14 147 aa13.37□□□□□ -0.27
TMEM50B-204ENST00000442441 GAGE12JA6NER3 117 aa13.36□□□□□ -0.27
TMEM50B-204ENST00000442441 SIX6O95475 246 aa13.36□□□□□ -0.27
TMEM50B-204ENST00000442441 LINC00694P0DN24 101 aa13.36□□□□□ -0.27
TMEM50B-204ENST00000442441 ZNF80P51504 273 aaPredicted RBP13.36□□□□□ -0.27
TMEM50B-204ENST00000442441 GNG5P63218 68 aa13.36□□□□□ -0.27
TMEM50B-204ENST00000442441 GAGE1Q13065 139 aa13.36□□□□□ -0.27
TMEM50B-204ENST00000442441 GAGE4Q13068 117 aa13.36□□□□□ -0.27
TMEM50B-204ENST00000442441 GAGE5Q13069 117 aa13.36□□□□□ -0.27
TMEM50B-204ENST00000442441 GAGE13Q4V321 117 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 212.1 ms