RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 PSG8Q9UQ74 426 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 NF1P21359 2839 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 FAM223BA6NKX1 122 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 PSG3Q16557 428 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 TM4SF20Q53R12 229 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 LCNL1Q6ZST4 164 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 FAM223AQ8IWN6 122 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 GATD1Q8NB37 220 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 ZFAND3Q9H8U3 227 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 SERTM2A0A1B0GWG4 89 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 D6R8Y8 96 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 IGHG2P01859 326 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 ARL3P36405 182 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 NMUP48645 174 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 OR4X2Q8NGF9 303 aa10.89□□□□□ -0.67
LIMD1-202ENST00000440097 IGKV2-40A0A087WW87 121 aaPredicted RBP10.88□□□□□ -0.67
LIMD1-202ENST00000440097 IGKV2D-40P01614 121 aaPredicted RBP10.88□□□□□ -0.67
LIMD1-202ENST00000440097 IGF1P05019 195 aa10.88□□□□□ -0.67
LIMD1-202ENST00000440097 TMEM75Q8N9X5 138 aa10.88□□□□□ -0.67
LIMD1-202ENST00000440097 SAMD13Q5VXD3 122 aa10.88□□□□□ -0.67
LIMD1-202ENST00000440097 SETXQ7Z333 2677 aaKnown RBP10.88□□□□□ -0.67
LIMD1-202ENST00000440097 SIVA1O15304 175 aa10.88□□□□□ -0.67
LIMD1-202ENST00000440097 BUB3O43684 328 aa10.88□□□□□ -0.67
LIMD1-202ENST00000440097 CT45A10P0DMU9 189 aa10.88□□□□□ -0.67
LIMD1-202ENST00000440097 FABP2P12104 132 aa10.88□□□□□ -0.67
LIMD1-202ENST00000440097 HLA-DMBP28068 263 aa10.88□□□□□ -0.67
LIMD1-202ENST00000440097 RPL24P83731 157 aaKnown RBP10.88□□□□□ -0.67
LIMD1-202ENST00000440097 KLK15Q9H2R5 256 aa10.88□□□□□ -0.67
LIMD1-202ENST00000440097 SMAD5-AS1Q9Y6J3 95 aa10.88□□□□□ -0.67
LIMD1-202ENST00000440097 A0A096LNT2 108 aa10.87□□□□□ -0.67
LIMD1-202ENST00000440097 TRBV12-3P01733 135 aa10.87□□□□□ -0.67
LIMD1-202ENST00000440097 Q96MF0 132 aa10.87□□□□□ -0.67
LIMD1-202ENST00000440097 A0A1B0GW15 77 aa10.87□□□□□ -0.67
LIMD1-202ENST00000440097 CRIP1P50238 77 aa10.87□□□□□ -0.67
LIMD1-202ENST00000440097 RAB9AP51151 201 aa10.87□□□□□ -0.67
LIMD1-202ENST00000440097 PRELID3AQ96N28 172 aa10.87□□□□□ -0.67
LIMD1-202ENST00000440097 J3QLI3 93 aa10.86□□□□□ -0.67
LIMD1-202ENST00000440097 SMIM17P0DL12 118 aa10.86□□□□□ -0.67
LIMD1-202ENST00000440097 PLA2G2AP14555 144 aa10.86□□□□□ -0.67
LIMD1-202ENST00000440097 SAMD5Q5TGI4 173 aa10.86□□□□□ -0.67
LIMD1-202ENST00000440097 TEX48A0A1B0GUV7 120 aa10.86□□□□□ -0.67
LIMD1-202ENST00000440097 TMEM213A2RRL7 107 aa10.86□□□□□ -0.67
LIMD1-202ENST00000440097 C19orf54Q5BKX5 351 aa10.86□□□□□ -0.67
LIMD1-202ENST00000440097 AMN1Q8IY45 258 aa10.86□□□□□ -0.67
LIMD1-202ENST00000440097 RNF182Q8N6D2 247 aa10.86□□□□□ -0.67
LIMD1-202ENST00000440097 C8orf49Q96NF6 230 aa10.86□□□□□ -0.67
LIMD1-202ENST00000440097 BEX4Q9NWD9 120 aaPredicted RBP10.86□□□□□ -0.67
LIMD1-202ENST00000440097 CLPSL1A2RUU4 121 aa10.85□□□□□ -0.67
LIMD1-202ENST00000440097 HBDP02042 147 aa10.85□□□□□ -0.67
LIMD1-202ENST00000440097 IGHV4-31P0DP07 118 aa10.85□□□□□ -0.67
LIMD1-202ENST00000440097 PPIFP30405 207 aaKnown RBP10.85□□□□□ -0.67
LIMD1-202ENST00000440097 CRIP2P52943 208 aaPredicted RBP10.85□□□□□ -0.67
LIMD1-202ENST00000440097 KLK9Q2XQG4 91 aa10.85□□□□□ -0.67
LIMD1-202ENST00000440097 WFDC3Q8IUB2 231 aa10.85□□□□□ -0.67
LIMD1-202ENST00000440097 Q8TAT8 98 aa10.85□□□□□ -0.67
LIMD1-202ENST00000440097 KLK9Q9UKQ9 250 aa10.85□□□□□ -0.67
LIMD1-202ENST00000440097 SMIM13P0DJ93 91 aa10.85□□□□□ -0.67
LIMD1-202ENST00000440097 ZNF493Q6ZR52 646 aa10.85□□□□□ -0.67
LIMD1-202ENST00000440097 IFI27L1Q96BM0 104 aa10.85□□□□□ -0.67
LIMD1-202ENST00000440097 DKK2Q9UBU2 259 aa10.85□□□□□ -0.67
LIMD1-202ENST00000440097 TMSB15BA0A087X1C1 80 aa10.84□□□□□ -0.67
LIMD1-202ENST00000440097 TRBV6-1A0A0K0K1D8 114 aa10.84□□□□□ -0.67
LIMD1-202ENST00000440097 U3KQK5 164 aa10.84□□□□□ -0.67
LIMD1-202ENST00000440097 J3QKU1 62 aa10.84□□□□□ -0.67
LIMD1-202ENST00000440097 GCSHP23434 173 aa10.84□□□□□ -0.67
LIMD1-202ENST00000440097 LYZL1Q6UWQ5 148 aa10.84□□□□□ -0.67
LIMD1-202ENST00000440097 ORMDL3Q8N138 153 aa10.84□□□□□ -0.67
LIMD1-202ENST00000440097 TMEM190Q8WZ59 177 aa10.84□□□□□ -0.67
LIMD1-202ENST00000440097 USMG5Q96IX5 58 aa10.84□□□□□ -0.67
LIMD1-202ENST00000440097 GTSF1LQ9H1H1 148 aa10.84□□□□□ -0.67
LIMD1-202ENST00000440097 AZU1P20160 251 aa10.83□□□□□ -0.68
LIMD1-202ENST00000440097 FXYD2P54710 66 aa10.83□□□□□ -0.68
LIMD1-202ENST00000440097 RPL11P62913 178 aaKnown RBP10.83□□□□□ -0.68
LIMD1-202ENST00000440097 FAM104BQ5XKR9 115 aa10.83□□□□□ -0.68
LIMD1-202ENST00000440097 SMKR1H3BMG3 65 aa10.83□□□□□ -0.68
LIMD1-202ENST00000440097 Q6AWC8 147 aa10.83□□□□□ -0.68
LIMD1-202ENST00000440097 UNQ9165/PRO28630Q6UXU0 137 aa10.83□□□□□ -0.68
LIMD1-202ENST00000440097 VGLL1Q99990 258 aa10.83□□□□□ -0.68
LIMD1-202ENST00000440097 K7ERJ3 54 aa10.82□□□□□ -0.68
LIMD1-202ENST00000440097 MRPL51Q4U2R6 128 aaKnown RBP10.82□□□□□ -0.68
LIMD1-202ENST00000440097 C18orf15Q96N68 181 aa10.82□□□□□ -0.68
LIMD1-202ENST00000440097 TTTY13Q9BZ97 58 aa10.82□□□□□ -0.68
LIMD1-202ENST00000440097 IGKV3-7A0A075B6H7 116 aa10.82□□□□□ -0.68
LIMD1-202ENST00000440097 FBLL1A6NHQ2 334 aaKnown RBP10.82□□□□□ -0.68
LIMD1-202ENST00000440097 H3BUA1 57 aa10.82□□□□□ -0.68
LIMD1-202ENST00000440097 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.82□□□□□ -0.68
LIMD1-202ENST00000440097 DUX5Q96PT3 197 aa10.82□□□□□ -0.68
LIMD1-202ENST00000440097 IGKV2D-26A0A0A0MRZ7 120 aa10.81□□□□□ -0.68
LIMD1-202ENST00000440097 SMAGPQ0VAQ4 97 aa10.81□□□□□ -0.68
LIMD1-202ENST00000440097 ERCC8Q13216 396 aa10.81□□□□□ -0.68
LIMD1-202ENST00000440097 SLC50A1Q9BRV3 221 aa10.81□□□□□ -0.68
LIMD1-202ENST00000440097 NPYP01303 97 aa10.81□□□□□ -0.68
LIMD1-202ENST00000440097 LRRC75A-AS1Q8N1F1 130 aa10.81□□□□□ -0.68
LIMD1-202ENST00000440097 TEP1Q99973 2627 aaKnown RBP10.81□□□□□ -0.68
LIMD1-202ENST00000440097 PRAC2D3DTV9 90 aa10.8□□□□□ -0.68
LIMD1-202ENST00000440097 C8orf86Q6ZUL3 223 aa10.8□□□□□ -0.68
LIMD1-202ENST00000440097 C16orf92Q96LL3 132 aa10.8□□□□□ -0.68
LIMD1-202ENST00000440097 PRR25Q96S07 402 aa10.8□□□□□ -0.68
LIMD1-202ENST00000440097 ATP6V0BQ99437 205 aa10.8□□□□□ -0.68
LIMD1-202ENST00000440097 JMJD1CQ15652 2540 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms