RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 OR1N2Q8NGR9 330 aa3.63□□□□□ -1.83
EDEM3-203ENST00000439962 PRR25Q96S07 402 aa3.63□□□□□ -1.83
EDEM3-203ENST00000439962 U3KQE9 123 aa3.63□□□□□ -1.83
EDEM3-203ENST00000439962 IGKV3-7A0A075B6H7 116 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 TRAV41A0A0B4J266 112 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 IGHV1-24A0A0C4DH33 117 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 HSBP1L1C9JCN9 74 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 K7EMI3 77 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 CA1P00915 261 aaPredicted RBP3.62□□□□□ -1.83
EDEM3-203ENST00000439962 IGLC6P0CF74 106 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 MED14OSP0DP75 135 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 HNRNPA3P51991 378 aaKnown RBP3.62□□□□□ -1.83
EDEM3-203ENST00000439962 KIAA1644Q3SXP7 199 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 RNASEKQ6P5S7 137 aaKnown RBP3.62□□□□□ -1.83
EDEM3-203ENST00000439962 OR10AG1Q8NH19 301 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 URB1-AS1Q96HZ7 61 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 PGLYRP4Q96LB8 373 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 ZFAND3Q9H8U3 227 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 TSSC4Q9Y5U2 329 aaPredicted RBP3.62□□□□□ -1.83
EDEM3-203ENST00000439962 IGHV4-4A0A075B6R2 117 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 CCL24O00175 119 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 SPINK4O60575 86 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 TRBV12-3P01733 135 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 IGHG2P01859 326 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 SNRPCP09234 159 aaKnown RBP3.62□□□□□ -1.83
EDEM3-203ENST00000439962 CAMPP49913 170 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 CACNG7P62955 275 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 KIR3DS1Q14943 382 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 FAM104BQ5XKR9 115 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 EBLN2Q6P2I7 272 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 ORMDL3Q8N138 153 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 EXOC3-AS1Q8N2X6 119 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 ORAOV1Q8WV07 137 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 C16orf95Q9H693 158 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 AP5S1Q9NUS5 200 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 PAM16Q9Y3D7 125 aa3.62□□□□□ -1.83
EDEM3-203ENST00000439962 IGHV3OR16-13A0A075B7E8 117 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 IGHV3-74A0A0B4J1X5 117 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 LINC01549A6NIU2 74 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 ADARB2-AS1A8MUL3 147 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 FABP5P3A8MUU1 101 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 SIVA1O15304 175 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 DLEU1O43261 78 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 BUB3O43684 328 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 SAP30O75446 220 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 IGF1P05019 195 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 HLA-DRB4P13762 266 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 LGALS9BQ3B8N2 356 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 LGALS9CQ6DKI2 356 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 C9orf47Q6ZRZ4 202 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 RAX2Q96IS3 184 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 USMG5Q96IX5 58 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 HLA-DRB4X5D2U9 266 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 IGHV3-49A0A0A0MS15 119 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 TMEM238LA0A1B0GVL6 79 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 WIPF1O43516 503 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 SH2D1AO60880 128 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 NTF3P20783 257 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 EDN2P20800 178 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 TSPOP30536 169 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 CRIP1P50238 77 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 FA2HQ7L5A8 372 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 METTL26Q96S19 204 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 NXT2Q9NPJ8 142 aaKnown RBP3.61□□□□□ -1.83
EDEM3-203ENST00000439962 RPH3ALQ9UNE2 315 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 IGHV4OR15-8A0A075B7B6 117 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 A0A087WW49 117 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 OR4C46A6NHA9 309 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 ZNF207O43670 478 aaKnown RBP3.61□□□□□ -1.83
EDEM3-203ENST00000439962 SYNJ2BPP57105 145 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 LEMD1Q68G75 181 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 Q6ZN92 141 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 FER1L6-AS1Q8NA97 138 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 SMPXQ9UHP9 88 aa3.61□□□□□ -1.83
EDEM3-203ENST00000439962 NDUFA4O00483 81 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 ARMS2P0C7Q2 107 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 PRR31Q5SQ13 230 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 LCN12Q6JVE5 192 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 NDUFA11Q86Y39 141 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 FAM19A2Q8N3H0 131 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 DLX4Q92988 240 aaPredicted RBP3.6□□□□□ -1.83
EDEM3-203ENST00000439962 SSBP4Q9BWG4 385 aaPredicted RBP3.6□□□□□ -1.83
EDEM3-203ENST00000439962 SMAD5-AS1Q9Y6J3 95 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 TRAV8-1A0A0A6YYK1 113 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 OVOL1O14753 267 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 SNAI2O43623 268 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 HBDP02042 147 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 PRB4P10163 310 aaPredicted RBP3.6□□□□□ -1.83
EDEM3-203ENST00000439962 RHOGP84095 191 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 ATP5G2Q06055 141 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 FOXE3Q13461 319 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 C15orf32Q32M92 178 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 TDRG1Q3Y452 100 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 SLC25A34Q6PIV7 304 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 APRG1Q8IVJ8 170 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 PRSS3P2Q8NHM4 247 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 LINC00477Q96M19 166 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 SCRT2Q9NQ03 307 aa3.6□□□□□ -1.83
EDEM3-203ENST00000439962 PPP1R17O96001 155 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms