RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ANKRD11Q6UB99 2663 aaPredicted RBP7.02□□□□□ -1.29
COPB1-202ENST00000439561 G3V318 75 aa7.01□□□□□ -1.29
COPB1-202ENST00000439561 CTSGP08311 255 aa7.01□□□□□ -1.29
COPB1-202ENST00000439561 RNASE4P34096 147 aaKnown RBP7.01□□□□□ -1.29
COPB1-202ENST00000439561 C2orf66Q6UXQ4 117 aa7.01□□□□□ -1.29
COPB1-202ENST00000439561 CEP295Q9C0D2 2601 aa7.01□□□□□ -1.29
COPB1-202ENST00000439561 IGKV3D-20A0A0C4DH25 116 aa7.01□□□□□ -1.29
COPB1-202ENST00000439561 IGLV11-55A0A075B6I3 123 aa7□□□□□ -1.29
COPB1-202ENST00000439561 ORMDL2Q53FV1 153 aa7□□□□□ -1.29
COPB1-202ENST00000439561 OR10J6PQ8NGY7 276 aa7□□□□□ -1.29
COPB1-202ENST00000439561 RNF5Q99942 180 aa7□□□□□ -1.29
COPB1-202ENST00000439561 SMIM2Q9BVW6 85 aa7□□□□□ -1.29
COPB1-202ENST00000439561 TM2D2Q9BX73 214 aa7□□□□□ -1.29
COPB1-202ENST00000439561 IGKV3-20P01619 116 aa7□□□□□ -1.29
COPB1-202ENST00000439561 SRD5A1P18405 259 aa7□□□□□ -1.29
COPB1-202ENST00000439561 SUMO2P61956 95 aaKnown RBP7□□□□□ -1.29
COPB1-202ENST00000439561 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7□□□□□ -1.29
COPB1-202ENST00000439561 SLC50A1Q9BRV3 221 aa7□□□□□ -1.29
COPB1-202ENST00000439561 ZNF256Q9Y2P7 627 aaPredicted RBP7□□□□□ -1.29
COPB1-202ENST00000439561 TRAV8-2A0A0B4J237 113 aa7□□□□□ -1.29
COPB1-202ENST00000439561 SHISA9B4DS77 424 aa7□□□□□ -1.29
COPB1-202ENST00000439561 MRPS12O15235 138 aaKnown RBP7□□□□□ -1.29
COPB1-202ENST00000439561 PRSS2P07478 247 aa7□□□□□ -1.29
COPB1-202ENST00000439561 ASIPP42127 132 aa7□□□□□ -1.29
COPB1-202ENST00000439561 ZFP2Q6ZN57 461 aa7□□□□□ -1.29
COPB1-202ENST00000439561 VMO1Q7Z5L0 202 aa7□□□□□ -1.29
COPB1-202ENST00000439561 ANAPC13Q9BS18 74 aa7□□□□□ -1.29
COPB1-202ENST00000439561 UBTD1Q9HAC8 227 aa7□□□□□ -1.29
COPB1-202ENST00000439561 SMAD5-AS1Q9Y6J3 95 aa7□□□□□ -1.29
COPB1-202ENST00000439561 ATRXP46100 2492 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 IGHV3-11P01762 117 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 HTN1P15515 57 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 ANXA2RQ3ZCQ2 193 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 GATD1Q8NB37 220 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 MRAP2Q96G30 205 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 PRSS29PA6NIE9 313 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 A8MWV9 139 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 LGALS3P17931 250 aaKnown RBP6.99□□□□□ -1.29
COPB1-202ENST00000439561 LINC01559Q495D7 138 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 C1orf122Q6ZSJ8 110 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 C11orf21Q9P2W6 132 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 CRYBA4P53673 196 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 C8orf86Q6ZUL3 223 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 TMEM219Q86XT9 240 aa6.99□□□□□ -1.29
COPB1-202ENST00000439561 SORL1Q92673 2214 aa6.98□□□□□ -1.29
COPB1-202ENST00000439561 TRAV2A0A0B4J234 112 aa6.98□□□□□ -1.29
COPB1-202ENST00000439561 ATP6V0E1O15342 81 aa6.98□□□□□ -1.29
COPB1-202ENST00000439561 MT-ATP8P03928 68 aa6.98□□□□□ -1.29
COPB1-202ENST00000439561 FOXI1Q12951 378 aa6.98□□□□□ -1.29
COPB1-202ENST00000439561 TAL2Q16559 108 aa6.98□□□□□ -1.29
COPB1-202ENST00000439561 A0A087WWL8 130 aa6.98□□□□□ -1.29
COPB1-202ENST00000439561 IGHV4-39P01824 125 aa6.98□□□□□ -1.29
COPB1-202ENST00000439561 IGF1P05019 195 aa6.98□□□□□ -1.29
COPB1-202ENST00000439561 GRNP28799 593 aaKnown RBP6.98□□□□□ -1.29
COPB1-202ENST00000439561 EEF1AKMT3Q96AZ1 226 aa6.98□□□□□ -1.29
COPB1-202ENST00000439561 PLEKHB2Q96CS7 222 aa6.98□□□□□ -1.29
COPB1-202ENST00000439561 DOPEY2Q9Y3R5 2298 aa6.98□□□□□ -1.29
COPB1-202ENST00000439561 LGALS1P09382 135 aaKnown RBP6.97□□□□□ -1.29
COPB1-202ENST00000439561 SCGB1A1P11684 91 aa6.97□□□□□ -1.29
COPB1-202ENST00000439561 C1QTNF4Q9BXJ3 329 aa6.97□□□□□ -1.29
COPB1-202ENST00000439561 C9JAW5 83 aa6.97□□□□□ -1.29
COPB1-202ENST00000439561 F6UB75 175 aa6.97□□□□□ -1.29
COPB1-202ENST00000439561 OVOL3O00110 214 aa6.97□□□□□ -1.29
COPB1-202ENST00000439561 PHLDA1Q8WV24 401 aaPredicted RBP6.97□□□□□ -1.29
COPB1-202ENST00000439561 KIR2DL4Q99706 377 aa6.97□□□□□ -1.29
COPB1-202ENST00000439561 ATMQ13315 3056 aa6.97□□□□□ -1.29
COPB1-202ENST00000439561 BUB3O43684 328 aa6.97□□□□□ -1.29
COPB1-202ENST00000439561 TEX29Q8N6K0 151 aa6.97□□□□□ -1.29
COPB1-202ENST00000439561 DPH3P1Q9H4G8 78 aa6.97□□□□□ -1.29
COPB1-202ENST00000439561 TP53TG1Q9Y2A0 90 aa6.97□□□□□ -1.29
COPB1-202ENST00000439561 CCL21O00585 134 aa6.96□□□□□ -1.29
COPB1-202ENST00000439561 DUSP14O95147 198 aaKnown RBP6.96□□□□□ -1.29
COPB1-202ENST00000439561 GNRH2O43555 120 aa6.96□□□□□ -1.3
COPB1-202ENST00000439561 ZNF56Q15929 161 aa6.96□□□□□ -1.3
COPB1-202ENST00000439561 TMEM190Q8WZ59 177 aa6.96□□□□□ -1.3
COPB1-202ENST00000439561 SMG1Q96Q15 3661 aaKnown RBP6.96□□□□□ -1.3
COPB1-202ENST00000439561 IGHV7-81A0A0B4J1V7 117 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 TRAV21A0A0B4J279 112 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 SNCGO76070 127 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 NPC2P61916 151 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 SS18L2Q9UHA2 77 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 PAX8Q06710 450 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 LY6EQ16553 131 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 TTC32Q5I0X7 151 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 PPDPFLQ8WWR9 84 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 ZMAT4Q9H898 229 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 F8W735 103 aaPredicted RBP6.95□□□□□ -1.3
COPB1-202ENST00000439561 TNFRSF13BO14836 293 aaPredicted RBP6.95□□□□□ -1.3
COPB1-202ENST00000439561 PF4V1P10720 104 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 FAM159AQ6UWV7 190 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 IGFL3Q6UXB1 125 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 NRACQ8N912 160 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 BAALCQ8WXS3 180 aa6.95□□□□□ -1.3
COPB1-202ENST00000439561 CUL9Q8IWT3 2517 aa6.94□□□□□ -1.3
COPB1-202ENST00000439561 TSPAN13O95857 204 aa6.94□□□□□ -1.3
COPB1-202ENST00000439561 RPL39P62891 51 aaKnown RBP6.94□□□□□ -1.3
COPB1-202ENST00000439561 ZFAND6Q6FIF0 208 aa6.94□□□□□ -1.3
COPB1-202ENST00000439561 LINC01548A6NM66 108 aa6.94□□□□□ -1.3
COPB1-202ENST00000439561 IGHG4P01861 327 aa6.94□□□□□ -1.3
COPB1-202ENST00000439561 CD7P09564 240 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 428.1 ms