RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 SPCS1Q9Y6A9 102 aa9.6□□□□□ -0.87
TCOF1-205ENST00000439160 TRAV26-2A0A0B4J265 109 aa9.6□□□□□ -0.87
TCOF1-205ENST00000439160 ZNF815PA8K554 130 aa9.6□□□□□ -0.87
TCOF1-205ENST00000439160 CDKN1BP46527 198 aa9.6□□□□□ -0.87
TCOF1-205ENST00000439160 AJUBAQ96IF1 538 aa9.6□□□□□ -0.87
TCOF1-205ENST00000439160 LINC00574Q9H8X3 128 aa9.6□□□□□ -0.87
TCOF1-205ENST00000439160 H3BUA1 57 aa9.6□□□□□ -0.87
TCOF1-205ENST00000439160 C3orf56Q8N813 242 aa9.6□□□□□ -0.87
TCOF1-205ENST00000439160 C20orf144Q9BQM9 153 aa9.6□□□□□ -0.87
TCOF1-205ENST00000439160 MRPL51Q4U2R6 128 aaKnown RBP9.59□□□□□ -0.87
TCOF1-205ENST00000439160 ZC2HC1BQ5TFG8 222 aa9.59□□□□□ -0.87
TCOF1-205ENST00000439160 ZNF295-AS1Q8N0V1 137 aa9.59□□□□□ -0.87
TCOF1-205ENST00000439160 NUPR1O60356 82 aa9.59□□□□□ -0.87
TCOF1-205ENST00000439160 SPRY2O43597 315 aa9.59□□□□□ -0.87
TCOF1-205ENST00000439160 FOXE3Q13461 319 aa9.59□□□□□ -0.87
TCOF1-205ENST00000439160 MEGF9Q9H1U4 602 aa9.59□□□□□ -0.87
TCOF1-205ENST00000439160 IGHV1OR15-1A0A075B7D0 117 aa9.59□□□□□ -0.87
TCOF1-205ENST00000439160 IGHV3-16A0A0C4DH30 117 aa9.59□□□□□ -0.87
TCOF1-205ENST00000439160 EGR2P11161 476 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-205ENST00000439160 ADARB2-AS1A8MUL3 147 aa9.58□□□□□ -0.88
TCOF1-205ENST00000439160 BCL6BQ8N143 479 aaPredicted RBP9.58□□□□□ -0.88
TCOF1-205ENST00000439160 C1orf159Q96HA4 380 aa9.58□□□□□ -0.88
TCOF1-205ENST00000439160 BUB3O43684 328 aa9.58□□□□□ -0.88
TCOF1-205ENST00000439160 CRYGCP07315 174 aa9.58□□□□□ -0.88
TCOF1-205ENST00000439160 RNASE1P07998 156 aaKnown RBP9.58□□□□□ -0.88
TCOF1-205ENST00000439160 CDSNQ15517 529 aa9.58□□□□□ -0.88
TCOF1-205ENST00000439160 CFHR3Q02985 330 aa9.57□□□□□ -0.88
TCOF1-205ENST00000439160 FANCD2OSQ96PS1 177 aa9.57□□□□□ -0.88
TCOF1-205ENST00000439160 PRADC1Q9BSG0 188 aa9.57□□□□□ -0.88
TCOF1-205ENST00000439160 INS-IGF2F8WCM5 200 aa9.57□□□□□ -0.88
TCOF1-205ENST00000439160 STPG4Q8N801 248 aa9.57□□□□□ -0.88
TCOF1-205ENST00000439160 COPS9Q8WXC6 57 aa9.57□□□□□ -0.88
TCOF1-205ENST00000439160 VCANP13611 3396 aa9.57□□□□□ -0.88
TCOF1-205ENST00000439160 TDRG1Q3Y452 100 aa9.57□□□□□ -0.88
TCOF1-205ENST00000439160 A0A087WX48 190 aa9.57□□□□□ -0.88
TCOF1-205ENST00000439160 LGALS1P09382 135 aaKnown RBP9.57□□□□□ -0.88
TCOF1-205ENST00000439160 TRAV2A0A0B4J234 112 aa9.56□□□□□ -0.88
TCOF1-205ENST00000439160 SLURP1P55000 103 aa9.56□□□□□ -0.88
TCOF1-205ENST00000439160 LY6G5BQ8NDX9 201 aa9.56□□□□□ -0.88
TCOF1-205ENST00000439160 HCFC1P51610 2035 aa9.56□□□□□ -0.88
TCOF1-205ENST00000439160 LINC01548A6NM66 108 aa9.56□□□□□ -0.88
TCOF1-205ENST00000439160 IGLC2P0DOY2 106 aa9.56□□□□□ -0.88
TCOF1-205ENST00000439160 IGLC3P0DOY3 106 aa9.56□□□□□ -0.88
TCOF1-205ENST00000439160 NEGR1Q7Z3B1 354 aa9.56□□□□□ -0.88
TCOF1-205ENST00000439160 LINC01549A6NIU2 74 aa9.56□□□□□ -0.88
TCOF1-205ENST00000439160 NPYP01303 97 aa9.56□□□□□ -0.88
TCOF1-205ENST00000439160 DEFB121Q5J5C9 76 aa9.56□□□□□ -0.88
TCOF1-205ENST00000439160 UBE2V1Q13404 147 aa9.55□□□□□ -0.88
TCOF1-205ENST00000439160 Q6ZVH6 145 aa9.55□□□□□ -0.88
TCOF1-205ENST00000439160 GNRH2O43555 120 aa9.55□□□□□ -0.88
TCOF1-205ENST00000439160 LINC01559Q495D7 138 aa9.55□□□□□ -0.88
TCOF1-205ENST00000439160 OR9G4Q8NGQ1 327 aa9.55□□□□□ -0.88
TCOF1-205ENST00000439160 CHD9Q3L8U1 2897 aa9.55□□□□□ -0.88
TCOF1-205ENST00000439160 EIF4EBP1Q13541 118 aaPredicted RBP9.55□□□□□ -0.88
TCOF1-205ENST00000439160 ORAOV1Q8WV07 137 aa9.55□□□□□ -0.88
TCOF1-205ENST00000439160 PYGO2Q9BRQ0 406 aa9.55□□□□□ -0.88
TCOF1-205ENST00000439160 C2orf66Q6UXQ4 117 aa9.55□□□□□ -0.88
TCOF1-205ENST00000439160 TEX43Q6ZNM6 134 aa9.55□□□□□ -0.88
TCOF1-205ENST00000439160 DOPEY1Q5JWR5 2465 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 PKD1L2Q7Z442 2459 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 MALP21145 153 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 MAJINQ3KP22 176 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 CFHR4Q92496 578 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 IGKV1D-37A0A075B6S9 117 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 TRAV13-1A0A0B4J241 112 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 SDHAF1A6NFY7 115 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 SIGLEC8Q9NYZ4 499 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 A0A1B0GWB2 263 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 PRAC2D3DTV9 90 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 DEFB1P60022 68 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 CFAP161Q6P656 301 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 CCL24O00175 119 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 TP53TG1Q9Y2A0 90 aa9.54□□□□□ -0.88
TCOF1-205ENST00000439160 ODF3BA8MYP8 253 aa9.53□□□□□ -0.88
TCOF1-205ENST00000439160 IGHG2P01859 326 aa9.53□□□□□ -0.88
TCOF1-205ENST00000439160 COA6Q5JTJ3 125 aaKnown RBP9.53□□□□□ -0.88
TCOF1-205ENST00000439160 TRPT1Q86TN4 253 aaKnown RBP9.53□□□□□ -0.88
TCOF1-205ENST00000439160 OR5A1Q8NGJ0 315 aa9.53□□□□□ -0.88
TCOF1-205ENST00000439160 DPH3Q96FX2 82 aa9.53□□□□□ -0.88
TCOF1-205ENST00000439160 ATP6V0BQ99437 205 aa9.53□□□□□ -0.88
TCOF1-205ENST00000439160 XIRP2A4UGR9 3374 aa9.53□□□□□ -0.88
TCOF1-205ENST00000439160 IGHV1-24A0A0C4DH33 117 aa9.53□□□□□ -0.88
TCOF1-205ENST00000439160 IGLL1P15814 213 aa9.53□□□□□ -0.88
TCOF1-205ENST00000439160 PLNP26678 52 aa9.53□□□□□ -0.88
TCOF1-205ENST00000439160 TRBV12-3P01733 135 aa9.53□□□□□ -0.88
TCOF1-205ENST00000439160 WI2-2373I1.2A0A1W2PRP0 233 aa9.52□□□□□ -0.88
TCOF1-205ENST00000439160 GAGE12JA6NER3 117 aa9.52□□□□□ -0.88
TCOF1-205ENST00000439160 GAGE1Q13065 139 aa9.52□□□□□ -0.88
TCOF1-205ENST00000439160 GAGE4Q13068 117 aa9.52□□□□□ -0.88
TCOF1-205ENST00000439160 GAGE5Q13069 117 aa9.52□□□□□ -0.88
TCOF1-205ENST00000439160 GAGE13Q4V321 117 aa9.52□□□□□ -0.88
TCOF1-205ENST00000439160 GAGE12BA1L429 117 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 GAGE7O76087 117 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 DNAL4O96015 105 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 GAGE12FP0CL80 117 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 GAGE12GP0CL81 117 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 GAGE12IP0CL82 117 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 HSD52Q0P140 79 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 COX11Q9Y6N1 276 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 FRMD6-AS1P0C7T7 363 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms