RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 KCNS1Q96KK3 526 aa11.04□□□□□ -0.64
CNOT9-205ENST00000433439 TRGV11A0A075B6L2 103 aa11.03□□□□□ -0.64
CNOT9-205ENST00000433439 SNURFLB1AK76 121 aa11.03□□□□□ -0.64
CNOT9-205ENST00000433439 B4DEV8 164 aa11.03□□□□□ -0.64
CNOT9-205ENST00000433439 K7EN84 100 aa11.03□□□□□ -0.64
CNOT9-205ENST00000433439 TYMSP04818 313 aa11.03□□□□□ -0.64
CNOT9-205ENST00000433439 RPL19P84098 196 aaKnown RBP11.03□□□□□ -0.64
CNOT9-205ENST00000433439 TMEM241Q24JQ0 296 aa11.03□□□□□ -0.64
CNOT9-205ENST00000433439 FAM74A3Q4VXF1 159 aa11.03□□□□□ -0.64
CNOT9-205ENST00000433439 SMIM12Q96EX1 92 aa11.03□□□□□ -0.64
CNOT9-205ENST00000433439 LINC00467Q9BRT7 94 aa11.03□□□□□ -0.64
CNOT9-205ENST00000433439 BIN3Q9NQY0 253 aa11.03□□□□□ -0.64
CNOT9-205ENST00000433439 GSN-AS1Q9NRJ2 163 aa11.03□□□□□ -0.64
CNOT9-205ENST00000433439 TIMM8BQ9Y5J9 83 aaPredicted RBP11.03□□□□□ -0.64
CNOT9-205ENST00000433439 IGKV3D-20A0A0C4DH25 116 aa11.02□□□□□ -0.65
CNOT9-205ENST00000433439 GRIFINA4D1Z8 144 aa11.02□□□□□ -0.65
CNOT9-205ENST00000433439 TMEM189A5PLL7 270 aa11.02□□□□□ -0.65
CNOT9-205ENST00000433439 UQCC3Q6UW78 93 aa11.02□□□□□ -0.65
CNOT9-205ENST00000433439 ZNF493Q6ZR52 646 aa11.02□□□□□ -0.65
CNOT9-205ENST00000433439 RNASE8Q8TDE3 154 aaKnown RBP11.02□□□□□ -0.65
CNOT9-205ENST00000433439 MDFICQ9P1T7 246 aa11.02□□□□□ -0.65
CNOT9-205ENST00000433439 NBEAL2Q6ZNJ1 2754 aa11.02□□□□□ -0.65
CNOT9-205ENST00000433439 ZNF415Q09FC8 603 aa11.01□□□□□ -0.65
CNOT9-205ENST00000433439 ADIRFQ15847 76 aa11.01□□□□□ -0.65
CNOT9-205ENST00000433439 C11orf68Q9H3H3 251 aaKnown RBP11.01□□□□□ -0.65
CNOT9-205ENST00000433439 NOP10Q9NPE3 64 aaKnown RBP11.01□□□□□ -0.65
CNOT9-205ENST00000433439 NAT8Q9UHE5 227 aa11.01□□□□□ -0.65
CNOT9-205ENST00000433439 CELA1Q9UNI1 258 aa11.01□□□□□ -0.65
CNOT9-205ENST00000433439 IGHV3-16A0A0C4DH30 117 aa11□□□□□ -0.65
CNOT9-205ENST00000433439 KRBOX1C9JBD0 128 aa11□□□□□ -0.65
CNOT9-205ENST00000433439 P01737 135 aa11□□□□□ -0.65
CNOT9-205ENST00000433439 S100A4P26447 101 aaKnown RBP11□□□□□ -0.65
CNOT9-205ENST00000433439 TDRG1Q3Y452 100 aa11□□□□□ -0.65
CNOT9-205ENST00000433439 FAM222AQ5U5X8 452 aa11□□□□□ -0.65
CNOT9-205ENST00000433439 LINC01551Q86U37 167 aa11□□□□□ -0.65
CNOT9-205ENST00000433439 OR2D3Q8NGH3 330 aa11□□□□□ -0.65
CNOT9-205ENST00000433439 RNASE7Q9H1E1 156 aaKnown RBP11□□□□□ -0.65
CNOT9-205ENST00000433439 LY96Q9Y6Y9 160 aa11□□□□□ -0.65
CNOT9-205ENST00000433439 PLAC8L1A1L4L8 177 aa10.99□□□□□ -0.65
CNOT9-205ENST00000433439 C19orf71A6NCJ1 209 aa10.99□□□□□ -0.65
CNOT9-205ENST00000433439 CXorf65A6NEN9 183 aa10.99□□□□□ -0.65
CNOT9-205ENST00000433439 ASIPP42127 132 aa10.99□□□□□ -0.65
CNOT9-205ENST00000433439 TCL1AP56279 114 aa10.99□□□□□ -0.65
CNOT9-205ENST00000433439 ERVFC1-1P60608 527 aa10.99□□□□□ -0.65
CNOT9-205ENST00000433439 RPL23P62829 140 aaKnown RBP10.99□□□□□ -0.65
CNOT9-205ENST00000433439 LINC01559Q495D7 138 aa10.99□□□□□ -0.65
CNOT9-205ENST00000433439 C11orf72Q8NBR9 251 aa10.99□□□□□ -0.65
CNOT9-205ENST00000433439 NUDT10Q8NFP7 164 aa10.99□□□□□ -0.65
CNOT9-205ENST00000433439 NUDT11Q96G61 164 aa10.99□□□□□ -0.65
CNOT9-205ENST00000433439 TMEM218A2RU14 115 aa10.98□□□□□ -0.65
CNOT9-205ENST00000433439 F8W036 122 aa10.98□□□□□ -0.65
CNOT9-205ENST00000433439 SPART-AS1P0CW21 52 aa10.98□□□□□ -0.65
CNOT9-205ENST00000433439 DEFB130BP0DP73 79 aa10.98□□□□□ -0.65
CNOT9-205ENST00000433439 DEFB130AP0DP74 79 aa10.98□□□□□ -0.65
CNOT9-205ENST00000433439 IBA57Q5T440 356 aaKnown RBP10.98□□□□□ -0.65
CNOT9-205ENST00000433439 C11orf45Q8TAV5 145 aa10.98□□□□□ -0.65
CNOT9-205ENST00000433439 EDA2RQ9HAV5 297 aa10.98□□□□□ -0.65
CNOT9-205ENST00000433439 DKK2Q9UBU2 259 aa10.98□□□□□ -0.65
CNOT9-205ENST00000433439 TENM3Q9P273 2699 aa10.97□□□□□ -0.65
CNOT9-205ENST00000433439 TRGV1A0A0A0MS02 117 aa10.97□□□□□ -0.65
CNOT9-205ENST00000433439 GAGE12BA1L429 117 aa10.97□□□□□ -0.65
CNOT9-205ENST00000433439 H3BVH4 76 aa10.97□□□□□ -0.65
CNOT9-205ENST00000433439 GATCO43716 136 aaKnown RBP10.97□□□□□ -0.65
CNOT9-205ENST00000433439 GAGE7O76087 117 aa10.97□□□□□ -0.65
CNOT9-205ENST00000433439 GAGE12FP0CL80 117 aa10.97□□□□□ -0.65
CNOT9-205ENST00000433439 GAGE12GP0CL81 117 aa10.97□□□□□ -0.65
CNOT9-205ENST00000433439 GAGE12IP0CL82 117 aa10.97□□□□□ -0.65
CNOT9-205ENST00000433439 GZMBP10144 247 aa10.97□□□□□ -0.65
CNOT9-205ENST00000433439 NANOS2P60321 138 aaKnown RBP10.97□□□□□ -0.65
CNOT9-205ENST00000433439 MRPL16Q9NX20 251 aaKnown RBP10.97□□□□□ -0.65
CNOT9-205ENST00000433439 RNASE3P12724 160 aaKnown RBP10.96□□□□□ -0.65
CNOT9-205ENST00000433439 Q6ZTI0 123 aa10.96□□□□□ -0.65
CNOT9-205ENST00000433439 SLC7A5P1Q8MH63 180 aa10.96□□□□□ -0.65
CNOT9-205ENST00000433439 ISOC2Q96AB3 205 aa10.96□□□□□ -0.65
CNOT9-205ENST00000433439 RPP21Q9H633 154 aaKnown RBP10.96□□□□□ -0.65
CNOT9-205ENST00000433439 LYRM9A8MSI8 78 aa10.95□□□□□ -0.66
CNOT9-205ENST00000433439 ARMS2P0C7Q2 107 aa10.95□□□□□ -0.66
CNOT9-205ENST00000433439 ADCYAP1P18509 176 aa10.95□□□□□ -0.66
CNOT9-205ENST00000433439 RPS20P60866 119 aaKnown RBP10.95□□□□□ -0.66
CNOT9-205ENST00000433439 SSTP61278 116 aa10.95□□□□□ -0.66
CNOT9-205ENST00000433439 DAD1P61803 113 aa10.95□□□□□ -0.66
CNOT9-205ENST00000433439 DAZ2Q13117 558 aaKnown RBP10.95□□□□□ -0.66
CNOT9-205ENST00000433439 C15orf54Q8N8G6 183 aa10.95□□□□□ -0.66
CNOT9-205ENST00000433439 IL17DQ8TAD2 202 aa10.95□□□□□ -0.66
CNOT9-205ENST00000433439 SPXQ9BT56 116 aa10.95□□□□□ -0.66
CNOT9-205ENST00000433439 TPPP3Q9BW30 176 aa10.95□□□□□ -0.66
CNOT9-205ENST00000433439 DNAH9Q9NYC9 4486 aa10.95□□□□□ -0.66
CNOT9-205ENST00000433439 MUC21A0A0G2JKD1 596 aa10.94□□□□□ -0.66
CNOT9-205ENST00000433439 MUC21A0A140T8X8 626 aa10.94□□□□□ -0.66
CNOT9-205ENST00000433439 TEX48A0A1B0GUV7 120 aa10.94□□□□□ -0.66
CNOT9-205ENST00000433439 XKRY2A2RUG3 117 aa10.94□□□□□ -0.66
CNOT9-205ENST00000433439 FAM231DQ6ZW35 169 aa10.94□□□□□ -0.66
CNOT9-205ENST00000433439 OR10G8Q8NGN5 311 aa10.94□□□□□ -0.66
CNOT9-205ENST00000433439 SFRP2Q96HF1 295 aa10.94□□□□□ -0.66
CNOT9-205ENST00000433439 TRGV2A0A075B6R0 118 aa10.93□□□□□ -0.66
CNOT9-205ENST00000433439 M0R2P5 195 aa10.93□□□□□ -0.66
CNOT9-205ENST00000433439 HTN3P15516 51 aa10.93□□□□□ -0.66
CNOT9-205ENST00000433439 C12orf74Q32Q52 190 aa10.93□□□□□ -0.66
CNOT9-205ENST00000433439 ZNF575Q86XF7 245 aa10.93□□□□□ -0.66
CNOT9-205ENST00000433439 C9orf85Q96MD7 179 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms