RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 FAM162BQ5T6X4 162 aa13.12□□□□□ -0.31
RFTN1-202ENST00000431547 ZFAND6Q6FIF0 208 aa13.12□□□□□ -0.31
RFTN1-202ENST00000431547 Q6ZTC4 211 aa13.12□□□□□ -0.31
RFTN1-202ENST00000431547 PHLDA1Q8WV24 401 aaPredicted RBP13.12□□□□□ -0.31
RFTN1-202ENST00000431547 SDF2L1Q9HCN8 221 aa13.12□□□□□ -0.31
RFTN1-202ENST00000431547 RAB19A4D1S5 217 aa13.11□□□□□ -0.31
RFTN1-202ENST00000431547 GNRH2O43555 120 aa13.11□□□□□ -0.31
RFTN1-202ENST00000431547 DAD1P61803 113 aa13.11□□□□□ -0.31
RFTN1-202ENST00000431547 ZNF415Q09FC8 603 aa13.11□□□□□ -0.31
RFTN1-202ENST00000431547 ZNF767PQ75MW2 155 aa13.11□□□□□ -0.31
RFTN1-202ENST00000431547 LINC00612Q8N6U2 182 aa13.11□□□□□ -0.31
RFTN1-202ENST00000431547 NHLRC2Q8NBF2 726 aa13.11□□□□□ -0.31
RFTN1-202ENST00000431547 SMIM12Q96EX1 92 aa13.11□□□□□ -0.31
RFTN1-202ENST00000431547 MDFICQ9P1T7 246 aa13.11□□□□□ -0.31
RFTN1-202ENST00000431547 SH2D1AO60880 128 aa13.1□□□□□ -0.31
RFTN1-202ENST00000431547 TYMSP04818 313 aa13.1□□□□□ -0.31
RFTN1-202ENST00000431547 GNG4P50150 75 aa13.1□□□□□ -0.31
RFTN1-202ENST00000431547 RAB14P61106 215 aa13.1□□□□□ -0.31
RFTN1-202ENST00000431547 IFITM2Q01629 132 aa13.1□□□□□ -0.31
RFTN1-202ENST00000431547 CENPWQ5EE01 88 aa13.1□□□□□ -0.31
RFTN1-202ENST00000431547 CEMP1Q6PRD7 247 aaPredicted RBP13.1□□□□□ -0.31
RFTN1-202ENST00000431547 IGKV3D-20A0A0C4DH25 116 aa13.09□□□□□ -0.31
RFTN1-202ENST00000431547 IGHV3-16A0A0C4DH30 117 aa13.09□□□□□ -0.31
RFTN1-202ENST00000431547 NUPR2A6NF83 97 aa13.09□□□□□ -0.31
RFTN1-202ENST00000431547 IGLV2-8P01709 118 aa13.09□□□□□ -0.31
RFTN1-202ENST00000431547 DEFB130BP0DP73 79 aa13.09□□□□□ -0.31
RFTN1-202ENST00000431547 DEFB130AP0DP74 79 aa13.09□□□□□ -0.31
RFTN1-202ENST00000431547 SPXQ9BT56 116 aa13.09□□□□□ -0.31
RFTN1-202ENST00000431547 TRBV20OR9-2A0A075B6H5 130 aa13.08□□□□□ -0.32
RFTN1-202ENST00000431547 TRAV10A0A0B4J240 114 aa13.08□□□□□ -0.32
RFTN1-202ENST00000431547 SPINK4O60575 86 aa13.08□□□□□ -0.32
RFTN1-202ENST00000431547 ORM1P02763 201 aa13.08□□□□□ -0.32
RFTN1-202ENST00000431547 LGALS9BQ3B8N2 356 aa13.08□□□□□ -0.32
RFTN1-202ENST00000431547 DNAH7Q8WXX0 4024 aa13.08□□□□□ -0.32
RFTN1-202ENST00000431547 KRBOX1C9JBD0 128 aa13.07□□□□□ -0.32
RFTN1-202ENST00000431547 C9JCJ5 164 aa13.07□□□□□ -0.32
RFTN1-202ENST00000431547 SRP19P09132 144 aaKnown RBP13.07□□□□□ -0.32
RFTN1-202ENST00000431547 PARLQ9H300 379 aa13.07□□□□□ -0.32
RFTN1-202ENST00000431547 SMDT1Q9H4I9 107 aa13.07□□□□□ -0.32
RFTN1-202ENST00000431547 DEFB131BA0A096LNP1 70 aa13.06□□□□□ -0.32
RFTN1-202ENST00000431547 B4DEV8 164 aa13.06□□□□□ -0.32
RFTN1-202ENST00000431547 LINC01559Q495D7 138 aa13.06□□□□□ -0.32
RFTN1-202ENST00000431547 CLLU1Q5K131 121 aa13.06□□□□□ -0.32
RFTN1-202ENST00000431547 Q6ZTI0 123 aa13.06□□□□□ -0.32
RFTN1-202ENST00000431547 KLK5Q9Y337 293 aaPredicted RBP13.06□□□□□ -0.32
RFTN1-202ENST00000431547 TRGV1A0A0A0MS02 117 aa13.05□□□□□ -0.32
RFTN1-202ENST00000431547 GAGE12BA1L429 117 aa13.05□□□□□ -0.32
RFTN1-202ENST00000431547 GAGE7O76087 117 aa13.05□□□□□ -0.32
RFTN1-202ENST00000431547 GAGE12FP0CL80 117 aa13.05□□□□□ -0.32
RFTN1-202ENST00000431547 GAGE12GP0CL81 117 aa13.05□□□□□ -0.32
RFTN1-202ENST00000431547 GAGE12IP0CL82 117 aa13.05□□□□□ -0.32
RFTN1-202ENST00000431547 PEA15Q15121 130 aa13.05□□□□□ -0.32
RFTN1-202ENST00000431547 C18orf15Q96N68 181 aa13.05□□□□□ -0.32
RFTN1-202ENST00000431547 BIN3Q9NQY0 253 aa13.05□□□□□ -0.32
RFTN1-202ENST00000431547 PGPEP1LA6NFU8 196 aa13.04□□□□□ -0.32
RFTN1-202ENST00000431547 M0R036 132 aa13.04□□□□□ -0.32
RFTN1-202ENST00000431547 MGST1P10620 155 aaKnown RBP13.04□□□□□ -0.32
RFTN1-202ENST00000431547 CEBPGP53567 150 aa13.04□□□□□ -0.32
RFTN1-202ENST00000431547 DNLZQ5SXM8 178 aa13.04□□□□□ -0.32
RFTN1-202ENST00000431547 PRR27Q6MZM9 219 aa13.04□□□□□ -0.32
RFTN1-202ENST00000431547 ZNF575Q86XF7 245 aa13.04□□□□□ -0.32
RFTN1-202ENST00000431547 M0R2P5 195 aa13.03□□□□□ -0.32
RFTN1-202ENST00000431547 ATP5G1P05496 136 aa13.03□□□□□ -0.32
RFTN1-202ENST00000431547 RNASE3P12724 160 aaKnown RBP13.03□□□□□ -0.32
RFTN1-202ENST00000431547 ASIPP42127 132 aa13.03□□□□□ -0.32
RFTN1-202ENST00000431547 SRSF3P84103 164 aaKnown RBP13.03□□□□□ -0.32
RFTN1-202ENST00000431547 OCC1Q8TAD7 63 aa13.03□□□□□ -0.32
RFTN1-202ENST00000431547 RASL10AQ92737 203 aa13.03□□□□□ -0.32
RFTN1-202ENST00000431547 C9orf85Q96MD7 179 aa13.03□□□□□ -0.32
RFTN1-202ENST00000431547 MRPL16Q9NX20 251 aaKnown RBP13.03□□□□□ -0.32
RFTN1-202ENST00000431547 TRGV2A0A075B6R0 118 aa13.02□□□□□ -0.33
RFTN1-202ENST00000431547 C9JQL5 133 aa13.02□□□□□ -0.33
RFTN1-202ENST00000431547 PTH2Q96A98 100 aa13.02□□□□□ -0.33
RFTN1-202ENST00000431547 C19orf71A6NCJ1 209 aa13.01□□□□□ -0.33
RFTN1-202ENST00000431547 HTN3P15516 51 aa13.01□□□□□ -0.33
RFTN1-202ENST00000431547 S100A4P26447 101 aaKnown RBP13.01□□□□□ -0.33
RFTN1-202ENST00000431547 OR5I1Q13606 314 aa13.01□□□□□ -0.33
RFTN1-202ENST00000431547 DAZAP1Q96EP5 407 aaKnown RBP13.01□□□□□ -0.33
RFTN1-202ENST00000431547 FAM210BQ96KR6 192 aa13.01□□□□□ -0.33
RFTN1-202ENST00000431547 SMIM7Q9BQ49 75 aa13.01□□□□□ -0.33
RFTN1-202ENST00000431547 IL36BQ9NZH7 164 aa13.01□□□□□ -0.33
RFTN1-202ENST00000431547 LY96Q9Y6Y9 160 aa13.01□□□□□ -0.33
RFTN1-202ENST00000431547 TMSB15BA0A087X1C1 80 aa13□□□□□ -0.33
RFTN1-202ENST00000431547 GRIFINA4D1Z8 144 aa13□□□□□ -0.33
RFTN1-202ENST00000431547 ZNF727A8MUV8 499 aa13□□□□□ -0.33
RFTN1-202ENST00000431547 IGLL5B9A064 214 aa13□□□□□ -0.33
RFTN1-202ENST00000431547 CXCL1P09341 107 aa13□□□□□ -0.33
RFTN1-202ENST00000431547 K7EN84 100 aa12.99□□□□□ -0.33
RFTN1-202ENST00000431547 ARMS2P0C7Q2 107 aa12.99□□□□□ -0.33
RFTN1-202ENST00000431547 TCTAP57738 103 aa12.99□□□□□ -0.33
RFTN1-202ENST00000431547 RPL19P84098 196 aaKnown RBP12.99□□□□□ -0.33
RFTN1-202ENST00000431547 FAM74A3Q4VXF1 159 aa12.99□□□□□ -0.33
RFTN1-202ENST00000431547 NDUFAF3Q9BU61 184 aa12.99□□□□□ -0.33
RFTN1-202ENST00000431547 CSMD3Q7Z407 3707 aa12.99□□□□□ -0.33
RFTN1-202ENST00000431547 F5H768 121 aa12.98□□□□□ -0.33
RFTN1-202ENST00000431547 ZNF876PQ49A33 203 aa12.98□□□□□ -0.33
RFTN1-202ENST00000431547 SCRT2Q9NQ03 307 aa12.98□□□□□ -0.33
RFTN1-202ENST00000431547 IGHV4-4A0A075B6R2 117 aa12.97□□□□□ -0.33
RFTN1-202ENST00000431547 H3BVH4 76 aa12.97□□□□□ -0.33
RFTN1-202ENST00000431547 P01737 135 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms