RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 STAG3L3P0CL85 134 aa7.98□□□□□ -1.13
HDAC4-202ENST00000430200 GYPEP15421 78 aa7.98□□□□□ -1.13
HDAC4-202ENST00000430200 ATP6V0CP27449 155 aa7.98□□□□□ -1.13
HDAC4-202ENST00000430200 CDC34P49427 236 aaPredicted RBP7.98□□□□□ -1.13
HDAC4-202ENST00000430200 ACOT6Q3I5F7 207 aaPredicted RBP7.98□□□□□ -1.13
HDAC4-202ENST00000430200 FAM159AQ6UWV7 190 aa7.98□□□□□ -1.13
HDAC4-202ENST00000430200 PQLC2Q6ZP29 291 aa7.98□□□□□ -1.13
HDAC4-202ENST00000430200 OR2G3Q8NGZ4 309 aa7.98□□□□□ -1.13
HDAC4-202ENST00000430200 AQP10Q96PS8 301 aa7.98□□□□□ -1.13
HDAC4-202ENST00000430200 TRGV11A0A075B6L2 103 aa7.97□□□□□ -1.13
HDAC4-202ENST00000430200 TRAV4A0A0B4J268 109 aa7.97□□□□□ -1.13
HDAC4-202ENST00000430200 TRGV4A0A0C4DH28 118 aa7.97□□□□□ -1.13
HDAC4-202ENST00000430200 ZNF726P1Q15940 193 aa7.97□□□□□ -1.13
HDAC4-202ENST00000430200 IQCF2Q8IXL9 164 aa7.97□□□□□ -1.13
HDAC4-202ENST00000430200 SUN5Q8TC36 379 aa7.97□□□□□ -1.13
HDAC4-202ENST00000430200 RAB24Q969Q5 203 aa7.97□□□□□ -1.13
HDAC4-202ENST00000430200 TREM1Q9NP99 234 aa7.97□□□□□ -1.13
HDAC4-202ENST00000430200 TCRAP04437 139 aa7.96□□□□□ -1.14
HDAC4-202ENST00000430200 GCHFRP30047 84 aa7.96□□□□□ -1.14
HDAC4-202ENST00000430200 SRIP30626 198 aa7.96□□□□□ -1.14
HDAC4-202ENST00000430200 MRPL23Q16540 153 aaKnown RBP7.96□□□□□ -1.14
HDAC4-202ENST00000430200 NEGR1Q7Z3B1 354 aa7.96□□□□□ -1.14
HDAC4-202ENST00000430200 Q8N1X5 172 aa7.96□□□□□ -1.14
HDAC4-202ENST00000430200 CMTM2Q8TAZ6 248 aa7.96□□□□□ -1.14
HDAC4-202ENST00000430200 SPXQ9BT56 116 aa7.96□□□□□ -1.14
HDAC4-202ENST00000430200 SRRM2Q9UQ35 2752 aaKnown RBP7.96□□□□□ -1.14
HDAC4-202ENST00000430200 TRAV21A0A0B4J279 112 aa7.95□□□□□ -1.14
HDAC4-202ENST00000430200 A0A1W2PPV4 95 aa7.95□□□□□ -1.14
HDAC4-202ENST00000430200 M0R2P5 195 aa7.95□□□□□ -1.14
HDAC4-202ENST00000430200 PTTG1O95997 202 aa7.95□□□□□ -1.14
HDAC4-202ENST00000430200 GATA1P15976 413 aaPredicted RBP7.95□□□□□ -1.14
HDAC4-202ENST00000430200 RPL7L1Q6DKI1 246 aaKnown RBP7.95□□□□□ -1.14
HDAC4-202ENST00000430200 Q8N3U1 123 aa7.95□□□□□ -1.14
HDAC4-202ENST00000430200 LINC00479Q96M42 142 aa7.95□□□□□ -1.14
HDAC4-202ENST00000430200 C9orf85Q96MD7 179 aa7.95□□□□□ -1.14
HDAC4-202ENST00000430200 PSMG3Q9BT73 122 aaPredicted RBP7.95□□□□□ -1.14
HDAC4-202ENST00000430200 A0A087WTM6 91 aa7.94□□□□□ -1.14
HDAC4-202ENST00000430200 GCGP01275 180 aa7.94□□□□□ -1.14
HDAC4-202ENST00000430200 KRTAP10-1P60331 282 aa7.94□□□□□ -1.14
HDAC4-202ENST00000430200 ARL6IP6Q8N6S5 226 aa7.94□□□□□ -1.14
HDAC4-202ENST00000430200 C5orf17Q8NAS9 161 aa7.94□□□□□ -1.14
HDAC4-202ENST00000430200 ASB13Q8WXK3 278 aa7.94□□□□□ -1.14
HDAC4-202ENST00000430200 PSG8Q9UQ74 426 aa7.94□□□□□ -1.14
HDAC4-202ENST00000430200 IGHV3-73A0A0B4J1V6 119 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 TRAV34A0A0B4J273 112 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 PGPEP1LA6NFU8 196 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 C9JCJ5 164 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 RNASE3P12724 160 aaKnown RBP7.93□□□□□ -1.14
HDAC4-202ENST00000430200 XGP55808 180 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 SLAQ13239 276 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 ZNF506Q5JVG8 444 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 CFAP126Q5VTH2 177 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 SLC25A29Q8N8R3 303 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 OR4C5Q8NGB2 326 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 MED28Q9H204 178 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 SDF2L1Q9HCN8 221 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 SCRT2Q9NQ03 307 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 Q9UF83 564 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 LY96Q9Y6Y9 160 aa7.93□□□□□ -1.14
HDAC4-202ENST00000430200 RS1O15537 224 aa7.92□□□□□ -1.14
HDAC4-202ENST00000430200 GIPP09681 153 aaPredicted RBP7.92□□□□□ -1.14
HDAC4-202ENST00000430200 ERVFC1-1P60608 527 aa7.92□□□□□ -1.14
HDAC4-202ENST00000430200 HAMPP81172 84 aa7.92□□□□□ -1.14
HDAC4-202ENST00000430200 FLI1Q01543 452 aaPredicted RBP7.92□□□□□ -1.14
HDAC4-202ENST00000430200 FAM74A1Q5RGS3 127 aa7.92□□□□□ -1.14
HDAC4-202ENST00000430200 Q6ZSN1 163 aa7.92□□□□□ -1.14
HDAC4-202ENST00000430200 PRNTQ86SH4 94 aa7.92□□□□□ -1.14
HDAC4-202ENST00000430200 MSRB1Q9NZV6 116 aa7.92□□□□□ -1.14
HDAC4-202ENST00000430200 TNFSF18Q9UNG2 199 aa7.92□□□□□ -1.14
HDAC4-202ENST00000430200 FXYD6-FXYD2A0A087WZ82 144 aa7.91□□□□□ -1.14
HDAC4-202ENST00000430200 IGKV3D-20A0A0C4DH25 116 aa7.91□□□□□ -1.14
HDAC4-202ENST00000430200 ORM1P02763 201 aa7.91□□□□□ -1.14
HDAC4-202ENST00000430200 PFN1P07737 140 aaKnown RBP7.91□□□□□ -1.14
HDAC4-202ENST00000430200 LINC00694P0DN24 101 aa7.91□□□□□ -1.14
HDAC4-202ENST00000430200 SUMO1P63165 101 aaKnown RBP7.91□□□□□ -1.14
HDAC4-202ENST00000430200 ZNF876PQ49A33 203 aa7.91□□□□□ -1.14
HDAC4-202ENST00000430200 Q86TA4 180 aa7.91□□□□□ -1.14
HDAC4-202ENST00000430200 CYB561D1Q8N8Q1 229 aa7.91□□□□□ -1.14
HDAC4-202ENST00000430200 NHLRC2Q8NBF2 726 aa7.91□□□□□ -1.14
HDAC4-202ENST00000430200 PCNPQ8WW12 178 aaKnown RBP7.91□□□□□ -1.14
HDAC4-202ENST00000430200 EPDR1Q9UM22 224 aa7.91□□□□□ -1.14
HDAC4-202ENST00000430200 FBLL1A6NHQ2 334 aaKnown RBP7.9□□□□□ -1.14
HDAC4-202ENST00000430200 CRYGDP07320 174 aa7.9□□□□□ -1.14
HDAC4-202ENST00000430200 FGF8P55075 233 aaPredicted RBP7.9□□□□□ -1.14
HDAC4-202ENST00000430200 UBE2G2P60604 165 aa7.9□□□□□ -1.14
HDAC4-202ENST00000430200 KCNS1Q96KK3 526 aa7.9□□□□□ -1.14
HDAC4-202ENST00000430200 JPT2Q9H910 190 aa7.9□□□□□ -1.14
HDAC4-202ENST00000430200 BATF3Q9NR55 127 aa7.9□□□□□ -1.14
HDAC4-202ENST00000430200 ARL2-SNX15V9GYD0 113 aa7.9□□□□□ -1.14
HDAC4-202ENST00000430200 SERTM2A0A1B0GWG4 89 aa7.89□□□□□ -1.15
HDAC4-202ENST00000430200 LRCOL1A6NCL2 159 aa7.89□□□□□ -1.15
HDAC4-202ENST00000430200 SMLR1H3BR10 107 aa7.89□□□□□ -1.15
HDAC4-202ENST00000430200 CXorf1O96002 111 aa7.89□□□□□ -1.15
HDAC4-202ENST00000430200 CRIP1P50238 77 aa7.89□□□□□ -1.15
HDAC4-202ENST00000430200 SERF2P84101 59 aa7.89□□□□□ -1.15
HDAC4-202ENST00000430200 WFDC2Q14508 124 aa7.89□□□□□ -1.15
HDAC4-202ENST00000430200 TXNDC17Q9BRA2 123 aa7.89□□□□□ -1.15
HDAC4-202ENST00000430200 NDFIP1Q9BT67 221 aa7.89□□□□□ -1.15
HDAC4-202ENST00000430200 SAMD10Q9BYL1 202 aa7.89□□□□□ -1.15
HDAC4-202ENST00000430200 CYTL1Q9NRR1 136 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms