RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 NUPR2A6NF83 97 aa10.65□□□□□ -0.7
GARNL3-204ENST00000429629 C9JCJ5 164 aa10.65□□□□□ -0.7
GARNL3-204ENST00000429629 NANOS2P60321 138 aaKnown RBP10.65□□□□□ -0.7
GARNL3-204ENST00000429629 ZNF415Q09FC8 603 aa10.65□□□□□ -0.7
GARNL3-204ENST00000429629 MUC21Q5SSG8 566 aa10.65□□□□□ -0.7
GARNL3-204ENST00000429629 DNLZQ5SXM8 178 aa10.65□□□□□ -0.7
GARNL3-204ENST00000429629 CEMP1Q6PRD7 247 aaPredicted RBP10.65□□□□□ -0.7
GARNL3-204ENST00000429629 NOP10Q9NPE3 64 aaKnown RBP10.65□□□□□ -0.7
GARNL3-204ENST00000429629 GSN-AS1Q9NRJ2 163 aa10.65□□□□□ -0.7
GARNL3-204ENST00000429629 CELA1Q9UNI1 258 aa10.65□□□□□ -0.7
GARNL3-204ENST00000429629 DNAH7Q8WXX0 4024 aa10.64□□□□□ -0.71
GARNL3-204ENST00000429629 DAD1P61803 113 aa10.64□□□□□ -0.71
GARNL3-204ENST00000429629 TOR2AQ5JU69 321 aa10.64□□□□□ -0.71
GARNL3-204ENST00000429629 CASC10Q5T4H9 136 aa10.64□□□□□ -0.71
GARNL3-204ENST00000429629 PHLDA1Q8WV24 401 aaPredicted RBP10.64□□□□□ -0.71
GARNL3-204ENST00000429629 PTH2Q96A98 100 aa10.64□□□□□ -0.71
GARNL3-204ENST00000429629 NDUFAF3Q9BU61 184 aa10.64□□□□□ -0.71
GARNL3-204ENST00000429629 DERL1Q9BUN8 251 aa10.64□□□□□ -0.71
GARNL3-204ENST00000429629 C11orf21Q9P2W6 132 aa10.64□□□□□ -0.71
GARNL3-204ENST00000429629 TRAV10A0A0B4J240 114 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 IGHV3-16A0A0C4DH30 117 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 SPINK4O60575 86 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 IGLV2-8P01709 118 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 CXCL1P09341 107 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 GNG4P50150 75 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 TCTAP57738 103 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 IFITM2Q01629 132 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 PEA15Q15121 130 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 LINC01559Q495D7 138 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 CENPWQ5EE01 88 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 CLLU1Q5K131 121 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 FAM210BQ96KR6 192 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 MDFICQ9P1T7 246 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 KLK5Q9Y337 293 aaPredicted RBP10.63□□□□□ -0.71
GARNL3-204ENST00000429629 LY96Q9Y6Y9 160 aa10.63□□□□□ -0.71
GARNL3-204ENST00000429629 TRBV20OR9-2A0A075B6H5 130 aa10.62□□□□□ -0.71
GARNL3-204ENST00000429629 IGKV3D-20A0A0C4DH25 116 aa10.62□□□□□ -0.71
GARNL3-204ENST00000429629 RAB19A4D1S5 217 aa10.62□□□□□ -0.71
GARNL3-204ENST00000429629 KRBOX1C9JBD0 128 aa10.62□□□□□ -0.71
GARNL3-204ENST00000429629 GNRH2O43555 120 aa10.62□□□□□ -0.71
GARNL3-204ENST00000429629 SH2D1AO60880 128 aa10.62□□□□□ -0.71
GARNL3-204ENST00000429629 TYMSP04818 313 aa10.62□□□□□ -0.71
GARNL3-204ENST00000429629 SRP19P09132 144 aaKnown RBP10.62□□□□□ -0.71
GARNL3-204ENST00000429629 PIK3CD-AS1Q5SR53 167 aa10.62□□□□□ -0.71
GARNL3-204ENST00000429629 Q6ZTC4 211 aa10.62□□□□□ -0.71
GARNL3-204ENST00000429629 RASL10AQ92737 203 aa10.62□□□□□ -0.71
GARNL3-204ENST00000429629 NAGKQ9UJ70 344 aa10.62□□□□□ -0.71
GARNL3-204ENST00000429629 ORM1P02763 201 aa10.61□□□□□ -0.71
GARNL3-204ENST00000429629 FAM74A3Q4VXF1 159 aa10.61□□□□□ -0.71
GARNL3-204ENST00000429629 PARLQ9H300 379 aa10.61□□□□□ -0.71
GARNL3-204ENST00000429629 DEFB131BA0A096LNP1 70 aa10.6□□□□□ -0.71
GARNL3-204ENST00000429629 B4DEV8 164 aa10.6□□□□□ -0.71
GARNL3-204ENST00000429629 M0R2P5 195 aa10.6□□□□□ -0.71
GARNL3-204ENST00000429629 ZNF575Q86XF7 245 aa10.6□□□□□ -0.71
GARNL3-204ENST00000429629 C9orf85Q96MD7 179 aa10.6□□□□□ -0.71
GARNL3-204ENST00000429629 ATP5G1P05496 136 aa10.59□□□□□ -0.71
GARNL3-204ENST00000429629 DEFB130BP0DP73 79 aa10.59□□□□□ -0.71
GARNL3-204ENST00000429629 DEFB130AP0DP74 79 aa10.59□□□□□ -0.71
GARNL3-204ENST00000429629 ASIPP42127 132 aa10.59□□□□□ -0.71
GARNL3-204ENST00000429629 NHLRC2Q8NBF2 726 aa10.59□□□□□ -0.71
GARNL3-204ENST00000429629 OCC1Q8TAD7 63 aa10.59□□□□□ -0.71
GARNL3-204ENST00000429629 PCNPQ8WW12 178 aaKnown RBP10.59□□□□□ -0.71
GARNL3-204ENST00000429629 IL36BQ9NZH7 164 aa10.59□□□□□ -0.71
GARNL3-204ENST00000429629 C19orf71A6NCJ1 209 aa10.58□□□□□ -0.72
GARNL3-204ENST00000429629 CIDEAO60543 219 aa10.58□□□□□ -0.72
GARNL3-204ENST00000429629 MED14OSP0DP75 135 aa10.58□□□□□ -0.72
GARNL3-204ENST00000429629 RNASE3P12724 160 aaKnown RBP10.58□□□□□ -0.72
GARNL3-204ENST00000429629 Q6ZTI0 123 aa10.58□□□□□ -0.72
GARNL3-204ENST00000429629 DAZAP1Q96EP5 407 aaKnown RBP10.58□□□□□ -0.72
GARNL3-204ENST00000429629 TRGV1A0A0A0MS02 117 aa10.57□□□□□ -0.72
GARNL3-204ENST00000429629 GAGE12BA1L429 117 aa10.57□□□□□ -0.72
GARNL3-204ENST00000429629 GAGE7O76087 117 aa10.57□□□□□ -0.72
GARNL3-204ENST00000429629 GAGE12FP0CL80 117 aa10.57□□□□□ -0.72
GARNL3-204ENST00000429629 GAGE12GP0CL81 117 aa10.57□□□□□ -0.72
GARNL3-204ENST00000429629 GAGE12IP0CL82 117 aa10.57□□□□□ -0.72
GARNL3-204ENST00000429629 S100A4P26447 101 aaKnown RBP10.57□□□□□ -0.72
GARNL3-204ENST00000429629 RPS20P60866 119 aaKnown RBP10.57□□□□□ -0.72
GARNL3-204ENST00000429629 ZFAND6Q6FIF0 208 aa10.57□□□□□ -0.72
GARNL3-204ENST00000429629 SMIM7Q9BQ49 75 aa10.57□□□□□ -0.72
GARNL3-204ENST00000429629 SCRT2Q9NQ03 307 aa10.57□□□□□ -0.72
GARNL3-204ENST00000429629 TRGV2A0A075B6R0 118 aa10.56□□□□□ -0.72
GARNL3-204ENST00000429629 ZNF727A8MUV8 499 aa10.56□□□□□ -0.72
GARNL3-204ENST00000429629 C9JQL5 133 aa10.56□□□□□ -0.72
GARNL3-204ENST00000429629 MGST1P10620 155 aaKnown RBP10.56□□□□□ -0.72
GARNL3-204ENST00000429629 SLAQ13239 276 aa10.56□□□□□ -0.72
GARNL3-204ENST00000429629 SSBP4Q9BWG4 385 aaPredicted RBP10.56□□□□□ -0.72
GARNL3-204ENST00000429629 XKRY2A2RUG3 117 aa10.55□□□□□ -0.72
GARNL3-204ENST00000429629 H3BNG1 76 aa10.55□□□□□ -0.72
GARNL3-204ENST00000429629 M0R036 132 aa10.55□□□□□ -0.72
GARNL3-204ENST00000429629 TMEM241Q24JQ0 296 aa10.55□□□□□ -0.72
GARNL3-204ENST00000429629 PRR27Q6MZM9 219 aa10.55□□□□□ -0.72
GARNL3-204ENST00000429629 FAM231DQ6ZW35 169 aa10.55□□□□□ -0.72
GARNL3-204ENST00000429629 DYNC2H1Q8NCM8 4307 aaKnown RBP10.55□□□□□ -0.72
GARNL3-204ENST00000429629 PGPEP1LA6NFU8 196 aa10.54□□□□□ -0.72
GARNL3-204ENST00000429629 K7EN84 100 aa10.54□□□□□ -0.72
GARNL3-204ENST00000429629 P01737 135 aa10.54□□□□□ -0.72
GARNL3-204ENST00000429629 OR5AL1P0C617 328 aa10.54□□□□□ -0.72
GARNL3-204ENST00000429629 ARMS2P0C7Q2 107 aa10.54□□□□□ -0.72
GARNL3-204ENST00000429629 SRSF3P84103 164 aaKnown RBP10.54□□□□□ -0.72
GARNL3-204ENST00000429629 OR5I1Q13606 314 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms