RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 H3BNG1 76 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 SMLR1H3BR10 107 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 TMEM183BQ1AE95 376 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 C1orf134Q5TEV5 83 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 FAM159AQ6UWV7 190 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 TMEM183AQ8IXX5 376 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 ST6GAL2Q96JF0 529 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 Q9H8V8 135 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 TREM1Q9NP99 234 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 NAGKQ9UJ70 344 aa6.57□□□□□ -1.36
TRIM39-208ENST00000428555 A0A096LPF7 62 aa6.56□□□□□ -1.36
TRIM39-208ENST00000428555 TRAV34A0A0B4J273 112 aa6.56□□□□□ -1.36
TRIM39-208ENST00000428555 F6UZH7 168 aa6.56□□□□□ -1.36
TRIM39-208ENST00000428555 CXorf1O96002 111 aa6.56□□□□□ -1.36
TRIM39-208ENST00000428555 TCRAP04437 139 aa6.56□□□□□ -1.36
TRIM39-208ENST00000428555 ZNF415Q09FC8 603 aa6.56□□□□□ -1.36
TRIM39-208ENST00000428555 ZNF726P1Q15940 193 aa6.56□□□□□ -1.36
TRIM39-208ENST00000428555 CYTL1Q9NRR1 136 aa6.56□□□□□ -1.36
TRIM39-208ENST00000428555 TMEM167BQ9NRX6 74 aa6.56□□□□□ -1.36
TRIM39-208ENST00000428555 EPDR1Q9UM22 224 aa6.56□□□□□ -1.36
TRIM39-208ENST00000428555 CBY1Q9Y3M2 126 aa6.56□□□□□ -1.36
TRIM39-208ENST00000428555 TRAV21A0A0B4J279 112 aa6.55□□□□□ -1.36
TRIM39-208ENST00000428555 ARPC5O15511 151 aa6.55□□□□□ -1.36
TRIM39-208ENST00000428555 PAX4O43316 350 aa6.55□□□□□ -1.36
TRIM39-208ENST00000428555 TAGLN2P37802 199 aaKnown RBP6.55□□□□□ -1.36
TRIM39-208ENST00000428555 FHL2Q14192 279 aa6.55□□□□□ -1.36
TRIM39-208ENST00000428555 TDRG1Q3Y452 100 aa6.55□□□□□ -1.36
TRIM39-208ENST00000428555 SOHLH1Q5JUK2 328 aa6.55□□□□□ -1.36
TRIM39-208ENST00000428555 C5orf17Q8NAS9 161 aa6.55□□□□□ -1.36
TRIM39-208ENST00000428555 C8orf49Q96NF6 230 aa6.55□□□□□ -1.36
TRIM39-208ENST00000428555 PSG8Q9UQ74 426 aa6.55□□□□□ -1.36
TRIM39-208ENST00000428555 HHLA3Q9XRX5 114 aa6.55□□□□□ -1.36
TRIM39-208ENST00000428555 TRGV11A0A075B6L2 103 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 IGHV3-16A0A0C4DH30 117 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 SERTM2A0A1B0GWG4 89 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 GGTLC3B5MD39 225 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 K7EQM0 130 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 TAAR5O14804 337 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 TNFRSF6BO95407 300 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 IGLV2-11P01706 119 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 SFTA3P0C7M3 94 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 ZNF80P51504 273 aaPredicted RBP6.54□□□□□ -1.36
TRIM39-208ENST00000428555 CRYBA4P53673 196 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 C4orf48Q5BLP8 95 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 RASL10AQ92737 203 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 ZNF479Q96JC4 524 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 LINC00479Q96M42 142 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 C11orf21Q9P2W6 132 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 PRO0255Q9UI72 69 aa6.54□□□□□ -1.36
TRIM39-208ENST00000428555 NACAE9PAV3 2078 aa6.53□□□□□ -1.36
TRIM39-208ENST00000428555 TRGV4A0A0C4DH28 118 aa6.53□□□□□ -1.36
TRIM39-208ENST00000428555 CTXND1A0A1B0GTU2 59 aa6.53□□□□□ -1.36
TRIM39-208ENST00000428555 A0A1W2PRE2 83 aa6.53□□□□□ -1.36
TRIM39-208ENST00000428555 TYMSP04818 313 aa6.53□□□□□ -1.36
TRIM39-208ENST00000428555 FGF8P55075 233 aaPredicted RBP6.53□□□□□ -1.36
TRIM39-208ENST00000428555 UBE2G2P60604 165 aa6.53□□□□□ -1.36
TRIM39-208ENST00000428555 FLI1Q01543 452 aaPredicted RBP6.53□□□□□ -1.36
TRIM39-208ENST00000428555 SLAQ13239 276 aa6.53□□□□□ -1.36
TRIM39-208ENST00000428555 AKR1C8PQ5T2L2 129 aa6.53□□□□□ -1.36
TRIM39-208ENST00000428555 PRNTQ86SH4 94 aa6.53□□□□□ -1.36
TRIM39-208ENST00000428555 C6orf223Q8N319 242 aa6.53□□□□□ -1.36
TRIM39-208ENST00000428555 KCNS1Q96KK3 526 aa6.53□□□□□ -1.36
TRIM39-208ENST00000428555 NDFIP1Q9BT67 221 aa6.53□□□□□ -1.36
TRIM39-208ENST00000428555 MRPS16Q9Y3D3 137 aaKnown RBP6.53□□□□□ -1.36
TRIM39-208ENST00000428555 MUC4Q99102 2169 aa6.52□□□□□ -1.36
TRIM39-208ENST00000428555 H0Y8G0 127 aa6.52□□□□□ -1.37
TRIM39-208ENST00000428555 M0R2P5 195 aa6.52□□□□□ -1.37
TRIM39-208ENST00000428555 GCGP01275 180 aa6.52□□□□□ -1.37
TRIM39-208ENST00000428555 IFNA7P01567 189 aa6.52□□□□□ -1.37
TRIM39-208ENST00000428555 TNP2Q05952 138 aa6.52□□□□□ -1.37
TRIM39-208ENST00000428555 KCNRGQ8N5I3 272 aa6.52□□□□□ -1.37
TRIM39-208ENST00000428555 CYB561D1Q8N8Q1 229 aa6.52□□□□□ -1.37
TRIM39-208ENST00000428555 OR11H4Q8NGC9 324 aa6.52□□□□□ -1.37
TRIM39-208ENST00000428555 UPK3BQ9BT76 320 aa6.52□□□□□ -1.37
TRIM39-208ENST00000428555 KRTAP1-5Q9BYS1 174 aa6.52□□□□□ -1.37
TRIM39-208ENST00000428555 SDF2L1Q9HCN8 221 aa6.52□□□□□ -1.37
TRIM39-208ENST00000428555 ICOSQ9Y6W8 199 aa6.52□□□□□ -1.37
TRIM39-208ENST00000428555 FAM74A7A6NL05 159 aa6.51□□□□□ -1.37
TRIM39-208ENST00000428555 C9JCJ5 164 aa6.51□□□□□ -1.37
TRIM39-208ENST00000428555 FHITP49789 147 aa6.51□□□□□ -1.37
TRIM39-208ENST00000428555 MRPL23Q16540 153 aaKnown RBP6.51□□□□□ -1.37
TRIM39-208ENST00000428555 TOR2AQ5JU69 321 aa6.51□□□□□ -1.37
TRIM39-208ENST00000428555 SAPCD1Q5SSQ6 148 aa6.51□□□□□ -1.37
TRIM39-208ENST00000428555 LYPD5Q6UWN5 251 aa6.51□□□□□ -1.37
TRIM39-208ENST00000428555 OR4C5Q8NGB2 326 aa6.51□□□□□ -1.37
TRIM39-208ENST00000428555 TRAV4A0A0B4J268 109 aa6.5□□□□□ -1.37
TRIM39-208ENST00000428555 MAP1LC3B2A6NCE7 125 aa6.5□□□□□ -1.37
TRIM39-208ENST00000428555 FBLL1A6NHQ2 334 aaKnown RBP6.5□□□□□ -1.37
TRIM39-208ENST00000428555 HMSDA8MTL9 139 aa6.5□□□□□ -1.37
TRIM39-208ENST00000428555 PFN1P07737 140 aaKnown RBP6.5□□□□□ -1.37
TRIM39-208ENST00000428555 LINC01559Q495D7 138 aa6.5□□□□□ -1.37
TRIM39-208ENST00000428555 TMEM75Q8N9X5 138 aa6.5□□□□□ -1.37
TRIM39-208ENST00000428555 MAP1LC3BQ9GZQ8 125 aa6.5□□□□□ -1.37
TRIM39-208ENST00000428555 A0A0D9SG52 128 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 FABP5P3A8MUU1 101 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 K7EQD1 137 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 PEX7O00628 323 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 SIVA1O15304 175 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 NXPH4O95158 308 aa6.49□□□□□ -1.37
TRIM39-208ENST00000428555 GYPEP15421 78 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms