RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SSBP2P81877 361 aaPredicted RBP8.35□□□□□ -1.07
TCOF1-204ENST00000427724 ETDBQ3ZM63 59 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 LINC00173Q6ZV60 143 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 PIFOQ8TCI5 191 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 NDUFA4L2Q9NRX3 87 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 TTC32Q5I0X7 151 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 C11orf71Q6IPW1 123 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 IFI27L1Q96BM0 104 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 MGAQ8IWI9 3026 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 IGHV1-24A0A0C4DH33 117 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 TAX1BP3O14907 124 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 APOMO95445 188 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 ORMDL3Q8N138 153 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 VGLL1Q99990 258 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 SLC25A2Q9BXI2 301 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 IGKV2-40A0A087WW87 121 aaPredicted RBP8.34□□□□□ -1.07
TCOF1-204ENST00000427724 KNCNA6PVL3 124 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 CRLF1O75462 422 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 INSP01308 110 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 IGKV2D-40P01614 121 aaPredicted RBP8.34□□□□□ -1.07
TCOF1-204ENST00000427724 FOXE3Q13461 319 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 UTF1Q5T230 341 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 RASL11AQ6T310 242 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 C1orf159Q96HA4 380 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 TRGV9Q99603 122 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 HCFC1P51610 2035 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 ATG2AQ2TAZ0 1938 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 C9orf118A6NHY6 69 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 RPS20P60866 119 aaKnown RBP8.34□□□□□ -1.07
TCOF1-204ENST00000427724 SPINK13Q1W4C9 94 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 GAGE13Q4V321 117 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 C9orf139Q6ZV77 190 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 IGHV3-73A0A0B4J1V6 119 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 HBDP02042 147 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 PRB2P02812 416 aaPredicted RBP8.34□□□□□ -1.07
TCOF1-204ENST00000427724 P0C879 139 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 OR11H2Q8NH07 326 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 TRAV21A0A0B4J279 112 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 TMEM238LA0A1B0GVL6 79 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 A6NJY4 79 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 TOMM40O96008 361 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 MORN5Q5VZ52 161 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 TMEM86BQ8N661 226 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 Q8TAT8 98 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 ANAPC13Q9BS18 74 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 TP53TG3Q9ULZ0 132 aa8.34□□□□□ -1.07
TCOF1-204ENST00000427724 IGHV7-81A0A0B4J1V7 117 aa8.33□□□□□ -1.08
TCOF1-204ENST00000427724 PRR25Q96S07 402 aa8.33□□□□□ -1.08
TCOF1-204ENST00000427724 CHCHD5Q9BSY4 110 aa8.33□□□□□ -1.08
TCOF1-204ENST00000427724 NCR2O95944 276 aa8.33□□□□□ -1.08
TCOF1-204ENST00000427724 FABP5P3A8MUU1 101 aa8.33□□□□□ -1.08
TCOF1-204ENST00000427724 H7C1H1 209 aa8.33□□□□□ -1.08
TCOF1-204ENST00000427724 CRXO43186 299 aaPredicted RBP8.33□□□□□ -1.08
TCOF1-204ENST00000427724 PPBPP02775 128 aa8.33□□□□□ -1.08
TCOF1-204ENST00000427724 MYCNOSP40205 109 aa8.33□□□□□ -1.08
TCOF1-204ENST00000427724 RPL13AP40429 203 aaKnown RBP8.33□□□□□ -1.08
TCOF1-204ENST00000427724 D6R8Y8 96 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 K7EP34 96 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 NDUFA3O95167 84 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 DPH3P1Q9H4G8 78 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 IGKV1OR2-108A0A075B7D4 117 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 H3BRM9 83 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 Q6ZSV7 163 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 Q8N9W7 124 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 ZNF256Q9Y2P7 627 aaPredicted RBP8.32□□□□□ -1.08
TCOF1-204ENST00000427724 CRPP02741 224 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 CFHR4Q92496 578 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 SRSF8Q9BRL6 282 aaKnown RBP8.32□□□□□ -1.08
TCOF1-204ENST00000427724 TEX48A0A1B0GUV7 120 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 SMIM27A0A1W2PRY6 76 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 NDUFA4O00483 81 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 COX8AP10176 69 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 IFI27P40305 119 aaPredicted RBP8.32□□□□□ -1.08
TCOF1-204ENST00000427724 Q6YL49 198 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 COL12A1Q99715 3063 aa8.32□□□□□ -1.08
TCOF1-204ENST00000427724 POU2AF1Q16633 256 aa8.31□□□□□ -1.08
TCOF1-204ENST00000427724 C5orf56Q8N8D9 126 aa8.31□□□□□ -1.08
TCOF1-204ENST00000427724 AJUBAQ96IF1 538 aa8.31□□□□□ -1.08
TCOF1-204ENST00000427724 CHD6Q8TD26 2715 aa8.31□□□□□ -1.08
TCOF1-204ENST00000427724 TRGV11A0A075B6L2 103 aa8.31□□□□□ -1.08
TCOF1-204ENST00000427724 IGHV4OR15-8A0A075B7B6 117 aa8.31□□□□□ -1.08
TCOF1-204ENST00000427724 A0A087WW49 117 aa8.31□□□□□ -1.08
TCOF1-204ENST00000427724 ATP6V0BQ99437 205 aa8.31□□□□□ -1.08
TCOF1-204ENST00000427724 CFAP47Q6ZTR5 3102 aa8.31□□□□□ -1.08
TCOF1-204ENST00000427724 EVI2AP22794 236 aa8.31□□□□□ -1.08
TCOF1-204ENST00000427724 KIR2DL4Q99706 377 aa8.31□□□□□ -1.08
TCOF1-204ENST00000427724 GEMIN7Q9H840 131 aaKnown RBP8.31□□□□□ -1.08
TCOF1-204ENST00000427724 EXPH5Q8NEV8 1989 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 GAGE12HA6NDE8 117 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 IGLV2-23P01705 113 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 HILS1P60008 231 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 TANC2Q9HCD6 1990 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 SPINK8P0C7L1 97 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 ARMS2P0C7Q2 107 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 APRG1Q8IVJ8 170 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 FXYD5Q96DB9 178 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 MBD6Q96DN6 1003 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 SMKR1H3BMG3 65 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 K7ERJ3 54 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 SNCGO76070 127 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms