RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 AKAP13Q12802 2813 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 E9PLD3 99 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 KLHL30-AS1Q8NEE0 82 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 NUP37Q8NFH4 326 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 DPM3Q9P2X0 92 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 NCOR2Q9Y618 2525 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 ATRXP46100 2492 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 SPG11Q96JI7 2443 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 DEFB1P60022 68 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 RRN3P1Q2M238 152 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 CLEC19AQ6UXS0 136 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 Q8N8P6 123 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 LINC00527Q9UJ94 153 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 FAM90A27PA6NNH2 459 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 CEACAM4O75871 244 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 THBDP07204 575 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 SRSF1Q07955 248 aaKnown RBP eCLIP5.8□□□□□ -1.48
LINC01108-201ENST00000427276 PDE6HQ13956 83 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 ANXA2RQ3ZCQ2 193 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 ZFP2Q6ZN57 461 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 YAE1D1Q9NRH1 226 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 HIGD1BQ9P298 99 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 DOPEY2Q9Y3R5 2298 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 MRPS12O15235 138 aaKnown RBP5.8□□□□□ -1.48
LINC01108-201ENST00000427276 IGLC6P0CF74 106 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 SLC25A16P16260 332 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 CRYBA4P53673 196 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 C14orf178Q8N769 122 aaPredicted RBP5.8□□□□□ -1.48
LINC01108-201ENST00000427276 PHLDA1Q8WV24 401 aaPredicted RBP5.8□□□□□ -1.48
LINC01108-201ENST00000427276 FANCD2OSQ96PS1 177 aa5.8□□□□□ -1.48
LINC01108-201ENST00000427276 TRBV6-1A0A0K0K1D8 114 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 C5orf64Q2M2E5 130 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 C15orf32Q32M92 178 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 FAM57AQ8TBR7 257 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 FAM110AQ9BQ89 295 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 TM2D2Q9BX73 214 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 SMPXQ9UHP9 88 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 SMAD5-AS1Q9Y6J3 95 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 A0A087WX48 190 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 IGKV3D-20A0A0C4DH25 116 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 MYMXA0A1B0GTQ4 84 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.79□□□□□ -1.48
LINC01108-201ENST00000427276 F5H697 171 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 M0QXV9 152 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 MT-ATP8P03928 68 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 CD3EP07766 207 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 MRPL23Q16540 153 aaKnown RBP5.79□□□□□ -1.48
LINC01108-201ENST00000427276 RPL39LQ96EH5 51 aaKnown RBP5.79□□□□□ -1.48
LINC01108-201ENST00000427276 PRADC1Q9BSG0 188 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 AGPAT4-IT1Q9H0P7 198 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 BEX4Q9NWD9 120 aaPredicted RBP5.79□□□□□ -1.48
LINC01108-201ENST00000427276 C11orf21Q9P2W6 132 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 IGHV3-64A0A075B6Q5 118 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 H7C1H1 209 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 PRTN3P24158 256 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 PAX8Q06710 450 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 TMEM170BQ5T4T1 132 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 GATD1Q8NB37 220 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 C16orf92Q96LL3 132 aa5.79□□□□□ -1.48
LINC01108-201ENST00000427276 CTSGP08311 255 aa5.78□□□□□ -1.48
LINC01108-201ENST00000427276 Q1RN00 199 aa5.78□□□□□ -1.48
LINC01108-201ENST00000427276 IGFL2Q6UWQ7 119 aa5.78□□□□□ -1.48
LINC01108-201ENST00000427276 DLX4Q92988 240 aaPredicted RBP5.78□□□□□ -1.48
LINC01108-201ENST00000427276 RAX2Q96IS3 184 aa5.78□□□□□ -1.48
LINC01108-201ENST00000427276 PHLDA3Q9Y5J5 127 aa5.78□□□□□ -1.48
LINC01108-201ENST00000427276 NACAE9PAV3 2078 aa5.78□□□□□ -1.48
LINC01108-201ENST00000427276 F8VRH5 84 aa5.78□□□□□ -1.48
LINC01108-201ENST00000427276 IGF1P05019 195 aa5.78□□□□□ -1.48
LINC01108-201ENST00000427276 PLNP26678 52 aa5.78□□□□□ -1.48
LINC01108-201ENST00000427276 PLEKHB2Q96CS7 222 aa5.78□□□□□ -1.48
LINC01108-201ENST00000427276 LINC01548A6NM66 108 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 FOXI1Q12951 378 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 PRR30Q53SZ7 412 aaPredicted RBP5.77□□□□□ -1.49
LINC01108-201ENST00000427276 C8orf31Q8N9H6 132 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 IGLV11-55A0A075B6I3 123 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 A0A1W2PRX2 142 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 G3V318 75 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 ZNF672Q499Z4 452 aaPredicted RBP5.77□□□□□ -1.49
LINC01108-201ENST00000427276 C2orf66Q6UXQ4 117 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 C8orf86Q6ZUL3 223 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 MRAP2Q96G30 205 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 KAAG1Q9UBP8 84 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 LGALS1P09382 135 aaKnown RBP5.77□□□□□ -1.49
LINC01108-201ENST00000427276 PLA2G2CQ5R387 149 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 KIR2DL4Q99706 377 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 ZMAT4Q9H898 229 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 EPG5Q9HCE0 2579 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 ACACBO00763 2458 aa5.77□□□□□ -1.49
LINC01108-201ENST00000427276 PRSS29PA6NIE9 313 aa5.76□□□□□ -1.49
LINC01108-201ENST00000427276 SHISA9B4DS77 424 aa5.76□□□□□ -1.49
LINC01108-201ENST00000427276 IGHG4P01861 327 aa5.76□□□□□ -1.49
LINC01108-201ENST00000427276 FAM74A4Q5TZK3 123 aa5.76□□□□□ -1.49
LINC01108-201ENST00000427276 SMIM2Q9BVW6 85 aa5.76□□□□□ -1.49
LINC01108-201ENST00000427276 SS18L2Q9UHA2 77 aa5.76□□□□□ -1.49
LINC01108-201ENST00000427276 IGHV3OR16-10A0A075B7F0 116 aa5.76□□□□□ -1.49
LINC01108-201ENST00000427276 F8W735 103 aaPredicted RBP5.76□□□□□ -1.49
LINC01108-201ENST00000427276 SRD5A1P18405 259 aa5.76□□□□□ -1.49
LINC01108-201ENST00000427276 Q6ZS92 163 aa5.76□□□□□ -1.49
LINC01108-201ENST00000427276 ANAPC13Q9BS18 74 aa5.76□□□□□ -1.49
LINC01108-201ENST00000427276 CSPG4Q6UVK1 2322 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms