RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 TRPT1Q86TN4 253 aaKnown RBP5.18□□□□□ -1.58
EPHA4-206ENST00000424339 EXOC3-AS1Q8N2X6 119 aa5.18□□□□□ -1.58
EPHA4-206ENST00000424339 DEFB125Q8N687 156 aa5.18□□□□□ -1.58
EPHA4-206ENST00000424339 RNF182Q8N6D2 247 aa5.18□□□□□ -1.58
EPHA4-206ENST00000424339 OR10D4PQ8NGN7 298 aa5.18□□□□□ -1.58
EPHA4-206ENST00000424339 HIST1H2BLQ99880 126 aa5.18□□□□□ -1.58
EPHA4-206ENST00000424339 DERL1Q9BUN8 251 aa5.18□□□□□ -1.58
EPHA4-206ENST00000424339 EPDR1Q9UM22 224 aa5.18□□□□□ -1.58
EPHA4-206ENST00000424339 YTHDF2Q9Y5A9 579 aaKnown RBP5.18□□□□□ -1.58
EPHA4-206ENST00000424339 PKD1L1Q8TDX9 2849 aa5.18□□□□□ -1.58
EPHA4-206ENST00000424339 TRAV9-1A0A075B6T8 112 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 GGTLC3B5MD39 225 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 DIRC3C9JPN6 131 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 K7EIL1 84 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 M0R3E3 92 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 TCRAP04437 139 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 SNRPCP09234 159 aaKnown RBP5.17□□□□□ -1.58
EPHA4-206ENST00000424339 CNN1P51911 297 aaKnown RBP5.17□□□□□ -1.58
EPHA4-206ENST00000424339 UBE2G2P60604 165 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 KCNIP4Q6PIL6 250 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 LINC00322Q6ZN03 302 aaPredicted RBP5.17□□□□□ -1.58
EPHA4-206ENST00000424339 Q6ZWC4 215 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 APRG1Q8IVJ8 170 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 MRAPQ8TCY5 172 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 C20orf144Q9BQM9 153 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 NDFIP1Q9BT67 221 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 CSTL1Q9H114 145 aa5.17□□□□□ -1.58
EPHA4-206ENST00000424339 DNHD1Q96M86 4753 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 A0A1W2PPQ1 181 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 KNCNA6PVL3 124 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 PEX7O00628 323 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 HLA-DMBP28068 263 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 LEPP41159 167 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 ZNF138P52744 262 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 DEFA6Q01524 100 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 HIST1H1AQ02539 215 aaPredicted RBP5.16□□□□□ -1.58
EPHA4-206ENST00000424339 JOSD1Q15040 202 aaPredicted RBP5.16□□□□□ -1.58
EPHA4-206ENST00000424339 SAPCD1Q5SSQ6 148 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 IGFL4Q6B9Z1 124 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 TMEM75Q8N9X5 138 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 OR4B1Q8NGF8 309 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 SFRP2Q96HF1 295 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 FMC1Q96HJ9 113 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 PACRGQ96M98 296 aaPredicted RBP5.16□□□□□ -1.58
EPHA4-206ENST00000424339 TP53TG1Q9Y2A0 90 aa5.16□□□□□ -1.58
EPHA4-206ENST00000424339 TRBV6-1A0A0K0K1D8 114 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 XKRY2A2RUG3 117 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 RBMY1BA6NDE4 496 aaKnown RBP5.15□□□□□ -1.59
EPHA4-206ENST00000424339 RBMY1EA6NEQ0 496 aaKnown RBP5.15□□□□□ -1.59
EPHA4-206ENST00000424339 ZNF705FA8MVS1 300 aaPredicted RBP5.15□□□□□ -1.59
EPHA4-206ENST00000424339 GATCO43716 136 aaKnown RBP5.15□□□□□ -1.59
EPHA4-206ENST00000424339 RBMY1DP0C7P1 496 aaKnown RBP5.15□□□□□ -1.59
EPHA4-206ENST00000424339 FRMD6-AS1P0C7T7 363 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 NHLRC4P0CG21 123 aaPredicted RBP5.15□□□□□ -1.59
EPHA4-206ENST00000424339 FABP4P15090 132 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 CRISP2P16562 243 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 CDKN1BP46527 198 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 UBE2G1P62253 170 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 PDZD11Q5EBL8 140 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 DEFB121Q5J5C9 76 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 AMTNQ6UX39 209 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 GOLT1AQ6ZVE7 132 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 TMEM256Q8N2U0 113 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 OR10G8Q8NGN5 311 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 SMIM12Q96EX1 92 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 B9D2Q9BPU9 175 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 WFDC10AQ9H1F0 79 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 IL36BQ9NZH7 164 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 ZNF492Q9P255 531 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 ZFP30Q9Y2G7 519 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 KLF12Q9Y4X4 402 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 NOTCH1P46531 2555 aa5.15□□□□□ -1.59
EPHA4-206ENST00000424339 AGRNO00468 2067 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 IGKV2-40A0A087WW87 121 aaPredicted RBP5.14□□□□□ -1.59
EPHA4-206ENST00000424339 PGPEP1LA6NFU8 196 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 PRAC2D3DTV9 90 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 F6UB75 175 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 K7EN84 100 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 CA1P00915 261 aaPredicted RBP5.14□□□□□ -1.59
EPHA4-206ENST00000424339 INSP01308 110 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 IGKV2D-40P01614 121 aaPredicted RBP5.14□□□□□ -1.59
EPHA4-206ENST00000424339 RPL35AP18077 110 aaKnown RBP5.14□□□□□ -1.59
EPHA4-206ENST00000424339 TAS2R60P59551 318 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 PKIAP61925 76 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 TMEM183BQ1AE95 376 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 GDF5OSQ5U4N7 250 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 OCC1Q8TAD7 63 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 FAM19A4Q96LR4 140 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 IGF2BP2-AS1Q96M15 143 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 AGPAT4-IT1Q9H0P7 198 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 RPH3ALQ9UNE2 315 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 V9GYV3 84 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 NBEAL1Q6ZS30 2694 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 FBN3Q75N90 2809 aa5.14□□□□□ -1.59
EPHA4-206ENST00000424339 SMIM9A6NGZ8 99 aa5.13□□□□□ -1.59
EPHA4-206ENST00000424339 KLLNB2CW77 178 aa5.13□□□□□ -1.59
EPHA4-206ENST00000424339 GCGP01275 180 aa5.13□□□□□ -1.59
EPHA4-206ENST00000424339 PRB2P02812 416 aaPredicted RBP5.13□□□□□ -1.59
EPHA4-206ENST00000424339 GPX1P07203 203 aa5.13□□□□□ -1.59
EPHA4-206ENST00000424339 CT45A10P0DMU9 189 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms