RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 C11orf68Q9H3H3 251 aaKnown RBP11.04□□□□□ -0.64
DENND3-202ENST00000424248 TEX48A0A1B0GUV7 120 aa11.04□□□□□ -0.64
DENND3-202ENST00000424248 FOXI2Q6ZQN5 318 aa11.04□□□□□ -0.64
DENND3-202ENST00000424248 TRBV6-1A0A0K0K1D8 114 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 J3QQQ9 107 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 PATE2Q6UY27 113 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 ARFGEF3Q5TH69 2177 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 ACACBO00763 2458 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 IGLL5B9A064 214 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 SPATA12Q7Z6I5 190 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 EGR2P11161 476 aaPredicted RBP11.03□□□□□ -0.64
DENND3-202ENST00000424248 TCF15Q12870 199 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 PAX4O43316 350 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 NPC2P61916 151 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 AMTNQ6UX39 209 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 TECTAO75443 2155 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 EML6Q6ZMW3 1958 aa11.03□□□□□ -0.64
DENND3-202ENST00000424248 C9orf153Q5TBE3 101 aa11.02□□□□□ -0.64
DENND3-202ENST00000424248 IGHV1OR15-1A0A075B7D0 117 aa11.02□□□□□ -0.65
DENND3-202ENST00000424248 CR1LQ2VPA4 569 aa11.02□□□□□ -0.65
DENND3-202ENST00000424248 LINC00173Q6ZV60 143 aa11.02□□□□□ -0.65
DENND3-202ENST00000424248 ODF3L1Q8IXM7 274 aa11.02□□□□□ -0.65
DENND3-202ENST00000424248 GATD1Q8NB37 220 aa11.02□□□□□ -0.65
DENND3-202ENST00000424248 UBE2E2Q96LR5 201 aa11.02□□□□□ -0.65
DENND3-202ENST00000424248 RPL35AP18077 110 aaKnown RBP11.01□□□□□ -0.65
DENND3-202ENST00000424248 C2orf16Q68DN1 1984 aa11.01□□□□□ -0.65
DENND3-202ENST00000424248 C1orf159Q96HA4 380 aa11.01□□□□□ -0.65
DENND3-202ENST00000424248 GAGE12JA6NER3 117 aa11.01□□□□□ -0.65
DENND3-202ENST00000424248 GAGE7O76087 117 aa11.01□□□□□ -0.65
DENND3-202ENST00000424248 GAGE12FP0CL80 117 aa11.01□□□□□ -0.65
DENND3-202ENST00000424248 GAGE12GP0CL81 117 aa11.01□□□□□ -0.65
DENND3-202ENST00000424248 GAGE12IP0CL82 117 aa11.01□□□□□ -0.65
DENND3-202ENST00000424248 GAGE4Q13068 117 aa11.01□□□□□ -0.65
DENND3-202ENST00000424248 ANXA2RQ3ZCQ2 193 aa11.01□□□□□ -0.65
DENND3-202ENST00000424248 IGHV7-4-1A0A0J9YVY3 117 aa11□□□□□ -0.65
DENND3-202ENST00000424248 C2orf70A6NJV1 201 aa11□□□□□ -0.65
DENND3-202ENST00000424248 PRSS29PA6NIE9 313 aa11□□□□□ -0.65
DENND3-202ENST00000424248 SPINK13Q1W4C9 94 aa11□□□□□ -0.65
DENND3-202ENST00000424248 TCTEX1D4Q5JR98 221 aa11□□□□□ -0.65
DENND3-202ENST00000424248 ASPHD1Q5U4P2 390 aa11□□□□□ -0.65
DENND3-202ENST00000424248 GTSF1Q8WW33 167 aa11□□□□□ -0.65
DENND3-202ENST00000424248 TRAV26-2A0A0B4J265 109 aa11□□□□□ -0.65
DENND3-202ENST00000424248 EDA2RQ9HAV5 297 aa11□□□□□ -0.65
DENND3-202ENST00000424248 NDUFA12Q9UI09 145 aa11□□□□□ -0.65
DENND3-202ENST00000424248 ANKHD1Q8IWZ3 2542 aaKnown RBP11□□□□□ -0.65
DENND3-202ENST00000424248 PLCE1Q9P212 2302 aa11□□□□□ -0.65
DENND3-202ENST00000424248 HOXB4P17483 251 aaPredicted RBP11□□□□□ -0.65
DENND3-202ENST00000424248 IGHV3-53P01767 116 aa10.99□□□□□ -0.65
DENND3-202ENST00000424248 RHOHQ15669 191 aa10.99□□□□□ -0.65
DENND3-202ENST00000424248 NPBQ8NG41 125 aa10.99□□□□□ -0.65
DENND3-202ENST00000424248 Q96MF0 132 aa10.99□□□□□ -0.65
DENND3-202ENST00000424248 HIST1H4AP62805 103 aaKnown RBP10.99□□□□□ -0.65
DENND3-202ENST00000424248 GAGE5Q13069 117 aa10.99□□□□□ -0.65
DENND3-202ENST00000424248 GAGE6Q13070 117 aa10.99□□□□□ -0.65
DENND3-202ENST00000424248 OBSL1O75147 1896 aa10.99□□□□□ -0.65
DENND3-202ENST00000424248 CFC1BP0CG36 223 aa10.99□□□□□ -0.65
DENND3-202ENST00000424248 CFC1P0CG37 223 aa10.99□□□□□ -0.65
DENND3-202ENST00000424248 GAGE2AQ6NT46 116 aa10.99□□□□□ -0.65
DENND3-202ENST00000424248 C17orf77Q96MU5 243 aa10.99□□□□□ -0.65
DENND3-202ENST00000424248 A0A1W2PNU3 283 aaPredicted RBP10.99□□□□□ -0.65
DENND3-202ENST00000424248 MORN5Q5VZ52 161 aa10.99□□□□□ -0.65
DENND3-202ENST00000424248 IGKV1-17P01599 117 aa10.98□□□□□ -0.65
DENND3-202ENST00000424248 PTPRQQ9UMZ3 2332 aa10.98□□□□□ -0.65
DENND3-202ENST00000424248 A0A1B0GXF2 115 aa10.98□□□□□ -0.65
DENND3-202ENST00000424248 I3L2K1 104 aa10.98□□□□□ -0.65
DENND3-202ENST00000424248 AGPAT4-IT1Q9H0P7 198 aa10.98□□□□□ -0.65
DENND3-202ENST00000424248 TNRC6AQ8NDV7 1962 aaKnown RBP10.97□□□□□ -0.65
DENND3-202ENST00000424248 IGKV1OR2-108A0A075B7D4 117 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 CENPVL3A0A0U1RRI6 287 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 C19orf71A6NCJ1 209 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 IGHG4P01861 327 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 JPT2Q9H910 190 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 G3V4G9 280 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 IGFBPL1Q8WX77 278 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 TRAV12-1A0A0B4J245 112 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 GRNP28799 593 aaKnown RBP10.97□□□□□ -0.65
DENND3-202ENST00000424248 SPRNQ5BIV9 151 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 C6orf226Q5I0X4 101 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 ZNF295-AS1Q8N0V1 137 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 CRIP3Q6Q6R5 217 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 DYNAPQ8N1N2 210 aa10.97□□□□□ -0.65
DENND3-202ENST00000424248 SOCS3O14543 225 aa10.96□□□□□ -0.65
DENND3-202ENST00000424248 SEM1Q6ZVN7 128 aa10.96□□□□□ -0.65
DENND3-202ENST00000424248 XCL2Q9UBD3 114 aa10.96□□□□□ -0.65
DENND3-202ENST00000424248 TEN1Q86WV5 123 aa10.96□□□□□ -0.65
DENND3-202ENST00000424248 DEFB104AQ8WTQ1 72 aa10.96□□□□□ -0.65
DENND3-202ENST00000424248 SPAG8Q99932 426 aaPredicted RBP10.96□□□□□ -0.65
DENND3-202ENST00000424248 ACYP1P07311 99 aa10.96□□□□□ -0.66
DENND3-202ENST00000424248 MAPK1IP1LQ8NDC0 245 aa10.96□□□□□ -0.66
DENND3-202ENST00000424248 NTN5Q8WTR8 489 aaPredicted RBP10.96□□□□□ -0.66
DENND3-202ENST00000424248 TRAV13-1A0A0B4J241 112 aa10.96□□□□□ -0.66
DENND3-202ENST00000424248 CTRLP40313 264 aa10.96□□□□□ -0.66
DENND3-202ENST00000424248 PHLDA1Q8WV24 401 aaPredicted RBP10.96□□□□□ -0.66
DENND3-202ENST00000424248 K7EIM0 57 aa10.95□□□□□ -0.66
DENND3-202ENST00000424248 SS18Q15532 418 aa10.95□□□□□ -0.66
DENND3-202ENST00000424248 FRMD6-AS1P0C7T7 363 aa10.95□□□□□ -0.66
DENND3-202ENST00000424248 FXYD2P54710 66 aa10.95□□□□□ -0.66
DENND3-202ENST00000424248 VPREB3Q9UKI3 123 aa10.95□□□□□ -0.66
DENND3-202ENST00000424248 FBXL19-AS1Q494R0 122 aa10.95□□□□□ -0.66
DENND3-202ENST00000424248 CARD19Q96LW7 228 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms