RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 CELA1Q9UNI1 258 aa12.16□□□□□ -0.46
FOXN4-203ENST00000423960 TEX48A0A1B0GUV7 120 aa12.15□□□□□ -0.46
FOXN4-203ENST00000423960 LYRM9A8MSI8 78 aa12.15□□□□□ -0.46
FOXN4-203ENST00000423960 SNURFLB1AK76 121 aa12.15□□□□□ -0.46
FOXN4-203ENST00000423960 GNRH2O43555 120 aa12.15□□□□□ -0.46
FOXN4-203ENST00000423960 SRP19P09132 144 aaKnown RBP12.15□□□□□ -0.46
FOXN4-203ENST00000423960 CEBPGP53567 150 aa12.15□□□□□ -0.46
FOXN4-203ENST00000423960 NANOS2P60321 138 aaKnown RBP12.15□□□□□ -0.46
FOXN4-203ENST00000423960 ZNF674Q2M3X9 581 aa12.15□□□□□ -0.46
FOXN4-203ENST00000423960 SDF2L1Q9HCN8 221 aa12.15□□□□□ -0.46
FOXN4-203ENST00000423960 NOP10Q9NPE3 64 aaKnown RBP12.15□□□□□ -0.46
FOXN4-203ENST00000423960 GSN-AS1Q9NRJ2 163 aa12.15□□□□□ -0.46
FOXN4-203ENST00000423960 TRGV11A0A075B6L2 103 aa12.14□□□□□ -0.47
FOXN4-203ENST00000423960 SH2D1AO60880 128 aa12.14□□□□□ -0.47
FOXN4-203ENST00000423960 IBA57Q5T440 356 aaKnown RBP12.14□□□□□ -0.47
FOXN4-203ENST00000423960 C11orf72Q8NBR9 251 aa12.14□□□□□ -0.47
FOXN4-203ENST00000423960 SMIM12Q96EX1 92 aa12.14□□□□□ -0.47
FOXN4-203ENST00000423960 PARLQ9H300 379 aa12.14□□□□□ -0.47
FOXN4-203ENST00000423960 MDFICQ9P1T7 246 aa12.14□□□□□ -0.47
FOXN4-203ENST00000423960 IGLV2-8P01709 118 aa12.13□□□□□ -0.47
FOXN4-203ENST00000423960 ORM1P02763 201 aa12.13□□□□□ -0.47
FOXN4-203ENST00000423960 MGST1P10620 155 aaKnown RBP12.13□□□□□ -0.47
FOXN4-203ENST00000423960 SRSF3P84103 164 aaKnown RBP12.13□□□□□ -0.47
FOXN4-203ENST00000423960 DAZ2Q13117 558 aaKnown RBP12.13□□□□□ -0.47
FOXN4-203ENST00000423960 C12orf74Q32Q52 190 aa12.13□□□□□ -0.47
FOXN4-203ENST00000423960 SMDT1Q9H4I9 107 aa12.13□□□□□ -0.47
FOXN4-203ENST00000423960 TRBV20OR9-2A0A075B6H5 130 aa12.12□□□□□ -0.47
FOXN4-203ENST00000423960 TYMSP04818 313 aa12.12□□□□□ -0.47
FOXN4-203ENST00000423960 TCL1AP56279 114 aa12.12□□□□□ -0.47
FOXN4-203ENST00000423960 ZNF415Q09FC8 603 aa12.12□□□□□ -0.47
FOXN4-203ENST00000423960 PRR27Q6MZM9 219 aa12.12□□□□□ -0.47
FOXN4-203ENST00000423960 IGKV3D-20A0A0C4DH25 116 aa12.11□□□□□ -0.47
FOXN4-203ENST00000423960 IGHV3-16A0A0C4DH30 117 aa12.11□□□□□ -0.47
FOXN4-203ENST00000423960 B4DEV8 164 aa12.11□□□□□ -0.47
FOXN4-203ENST00000423960 C9JCJ5 164 aa12.11□□□□□ -0.47
FOXN4-203ENST00000423960 C9JQL5 133 aa12.11□□□□□ -0.47
FOXN4-203ENST00000423960 DAD1P61803 113 aa12.11□□□□□ -0.47
FOXN4-203ENST00000423960 BIN3Q9NQY0 253 aa12.11□□□□□ -0.47
FOXN4-203ENST00000423960 PGPEP1LA6NFU8 196 aa12.1□□□□□ -0.47
FOXN4-203ENST00000423960 KRBOX1C9JBD0 128 aa12.1□□□□□ -0.47
FOXN4-203ENST00000423960 M0R036 132 aa12.1□□□□□ -0.47
FOXN4-203ENST00000423960 DEFB130BP0DP73 79 aa12.1□□□□□ -0.47
FOXN4-203ENST00000423960 DEFB130AP0DP74 79 aa12.1□□□□□ -0.47
FOXN4-203ENST00000423960 Q6ZTC4 211 aa12.1□□□□□ -0.47
FOXN4-203ENST00000423960 OCC1Q8TAD7 63 aa12.1□□□□□ -0.47
FOXN4-203ENST00000423960 DAZAP1Q96EP5 407 aaKnown RBP12.1□□□□□ -0.47
FOXN4-203ENST00000423960 SPXQ9BT56 116 aa12.1□□□□□ -0.47
FOXN4-203ENST00000423960 DYNC2H1Q8NCM8 4307 aaKnown RBP12.1□□□□□ -0.47
FOXN4-203ENST00000423960 STARD9Q9P2P6 4700 aa12.09□□□□□ -0.47
FOXN4-203ENST00000423960 ZNF727A8MUV8 499 aa12.09□□□□□ -0.47
FOXN4-203ENST00000423960 SPINK4O60575 86 aa12.09□□□□□ -0.47
FOXN4-203ENST00000423960 LINC01559Q495D7 138 aa12.09□□□□□ -0.47
FOXN4-203ENST00000423960 PHLDA1Q8WV24 401 aaPredicted RBP12.09□□□□□ -0.47
FOXN4-203ENST00000423960 SMIM7Q9BQ49 75 aa12.09□□□□□ -0.47
FOXN4-203ENST00000423960 RYR2Q92736 4967 aa12.09□□□□□ -0.47
FOXN4-203ENST00000423960 OR5I1Q13606 314 aa12.08□□□□□ -0.48
FOXN4-203ENST00000423960 TMSB15BA0A087X1C1 80 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 TRGV1A0A0A0MS02 117 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 GAGE12BA1L429 117 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 GAGE7O76087 117 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 GAGE12FP0CL80 117 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 GAGE12GP0CL81 117 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 GAGE12IP0CL82 117 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 S100A4P26447 101 aaKnown RBP12.07□□□□□ -0.48
FOXN4-203ENST00000423960 ASIPP42127 132 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 LGALS9BQ3B8N2 356 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 FAM74A3Q4VXF1 159 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 Q6ZTI0 123 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 ZNF575Q86XF7 245 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 LINC00612Q8N6U2 182 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 LY96Q9Y6Y9 160 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 TENM2Q9NT68 2774 aa12.07□□□□□ -0.48
FOXN4-203ENST00000423960 CSMD3Q7Z407 3707 aa12.06□□□□□ -0.48
FOXN4-203ENST00000423960 TRAV10A0A0B4J240 114 aa12.06□□□□□ -0.48
FOXN4-203ENST00000423960 GRIFINA4D1Z8 144 aa12.06□□□□□ -0.48
FOXN4-203ENST00000423960 C19orf71A6NCJ1 209 aa12.06□□□□□ -0.48
FOXN4-203ENST00000423960 K7EN84 100 aa12.06□□□□□ -0.48
FOXN4-203ENST00000423960 DNLZQ5SXM8 178 aa12.06□□□□□ -0.48
FOXN4-203ENST00000423960 CEMP1Q6PRD7 247 aaPredicted RBP12.06□□□□□ -0.48
FOXN4-203ENST00000423960 M0R2P5 195 aa12.05□□□□□ -0.48
FOXN4-203ENST00000423960 RNASE3P12724 160 aaKnown RBP12.05□□□□□ -0.48
FOXN4-203ENST00000423960 RPL19P84098 196 aaKnown RBP12.05□□□□□ -0.48
FOXN4-203ENST00000423960 TMEM241Q24JQ0 296 aa12.05□□□□□ -0.48
FOXN4-203ENST00000423960 SOHLH1Q5JUK2 328 aa12.05□□□□□ -0.48
FOXN4-203ENST00000423960 C9orf85Q96MD7 179 aa12.05□□□□□ -0.48
FOXN4-203ENST00000423960 MRPL16Q9NX20 251 aaKnown RBP12.05□□□□□ -0.48
FOXN4-203ENST00000423960 TRGV2A0A075B6R0 118 aa12.04□□□□□ -0.48
FOXN4-203ENST00000423960 DEFB131BA0A096LNP1 70 aa12.04□□□□□ -0.48
FOXN4-203ENST00000423960 NUPR2A6NF83 97 aa12.04□□□□□ -0.48
FOXN4-203ENST00000423960 P01737 135 aa12.04□□□□□ -0.48
FOXN4-203ENST00000423960 NUDT10Q8NFP7 164 aa12.04□□□□□ -0.48
FOXN4-203ENST00000423960 RASL10AQ92737 203 aa12.04□□□□□ -0.48
FOXN4-203ENST00000423960 NUDT11Q96G61 164 aa12.04□□□□□ -0.48
FOXN4-203ENST00000423960 SACSQ9NZJ4 4579 aa12.04□□□□□ -0.48
FOXN4-203ENST00000423960 LCE6AA0A183 80 aa12.03□□□□□ -0.48
FOXN4-203ENST00000423960 ATP5G1P05496 136 aa12.03□□□□□ -0.48
FOXN4-203ENST00000423960 CXCL1P09341 107 aa12.03□□□□□ -0.48
FOXN4-203ENST00000423960 ARMS2P0C7Q2 107 aa12.03□□□□□ -0.48
FOXN4-203ENST00000423960 HTN3P15516 51 aa12.03□□□□□ -0.48
FOXN4-203ENST00000423960 LINC01551Q86U37 167 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms