RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 INO80EQ8NBZ0 244 aaPredicted RBP17.48■□□□□ 0.39
SMDT1-202ENST00000422252 SGK494Q96LW2 274 aa17.48■□□□□ 0.39
SMDT1-202ENST00000422252 NDFIP1Q9BT67 221 aa17.48■□□□□ 0.39
SMDT1-202ENST00000422252 SH3BGRL3Q9H299 93 aa17.48■□□□□ 0.39
SMDT1-202ENST00000422252 SDF2L1Q9HCN8 221 aa17.48■□□□□ 0.39
SMDT1-202ENST00000422252 TRAV4A0A0B4J268 109 aa17.47■□□□□ 0.39
SMDT1-202ENST00000422252 M0R2P5 195 aa17.47■□□□□ 0.39
SMDT1-202ENST00000422252 TCRAP04437 139 aa17.47■□□□□ 0.39
SMDT1-202ENST00000422252 TYMSP04818 313 aa17.47■□□□□ 0.39
SMDT1-202ENST00000422252 KCNS1Q96KK3 526 aa17.47■□□□□ 0.39
SMDT1-202ENST00000422252 TNFSF18Q9UNG2 199 aa17.47■□□□□ 0.39
SMDT1-202ENST00000422252 K7EQD1 137 aa17.46■□□□□ 0.39
SMDT1-202ENST00000422252 K7EQM0 130 aa17.46■□□□□ 0.39
SMDT1-202ENST00000422252 CXorf1O96002 111 aa17.46■□□□□ 0.39
SMDT1-202ENST00000422252 LINC00315P59091 139 aa17.46■□□□□ 0.39
SMDT1-202ENST00000422252 PCNPQ8WW12 178 aaKnown RBP17.46■□□□□ 0.39
SMDT1-202ENST00000422252 ACTR3CQ9C0K3 210 aaPredicted RBP17.46■□□□□ 0.39
SMDT1-202ENST00000422252 TMEM167BQ9NRX6 74 aa17.46■□□□□ 0.39
SMDT1-202ENST00000422252 SRIP30626 198 aa17.45■□□□□ 0.38
SMDT1-202ENST00000422252 SPATA12Q7Z6I5 190 aa17.45■□□□□ 0.38
SMDT1-202ENST00000422252 OR4C5Q8NGB2 326 aa17.45■□□□□ 0.38
SMDT1-202ENST00000422252 RNF222A6NCQ9 220 aa17.44■□□□□ 0.38
SMDT1-202ENST00000422252 ORM1P02763 201 aa17.44■□□□□ 0.38
SMDT1-202ENST00000422252 GYPEP15421 78 aa17.44■□□□□ 0.38
SMDT1-202ENST00000422252 SUMO1P63165 101 aaKnown RBP17.44■□□□□ 0.38
SMDT1-202ENST00000422252 LRP1BQ9NZR2 4599 aa17.43■□□□□ 0.38
SMDT1-202ENST00000422252 FXYD6-FXYD2A0A087WZ82 144 aa17.43■□□□□ 0.38
SMDT1-202ENST00000422252 RPL7L1Q6DKI1 246 aaKnown RBP17.43■□□□□ 0.38
SMDT1-202ENST00000422252 EPDR1Q9UM22 224 aa17.43■□□□□ 0.38
SMDT1-202ENST00000422252 PSG8Q9UQ74 426 aa17.43■□□□□ 0.38
SMDT1-202ENST00000422252 BORCS7-ASMTA0A0B4J1R7 106 aa17.42■□□□□ 0.38
SMDT1-202ENST00000422252 GGTLC3B5MD39 225 aa17.42■□□□□ 0.38
SMDT1-202ENST00000422252 ZNF80P51504 273 aaPredicted RBP17.42■□□□□ 0.38
SMDT1-202ENST00000422252 C9JCJ5 164 aa17.41■□□□□ 0.38
SMDT1-202ENST00000422252 CDK2AP2O75956 126 aa17.41■□□□□ 0.38
SMDT1-202ENST00000422252 IGLV2-11P01706 119 aa17.41■□□□□ 0.38
SMDT1-202ENST00000422252 FLI1Q01543 452 aaPredicted RBP17.41■□□□□ 0.38
SMDT1-202ENST00000422252 Q6ZRN7 208 aaPredicted RBP17.41■□□□□ 0.38
SMDT1-202ENST00000422252 CYB561D1Q8N8Q1 229 aa17.41■□□□□ 0.38
SMDT1-202ENST00000422252 OR2T35Q8NGX2 323 aa17.41■□□□□ 0.38
SMDT1-202ENST00000422252 TAAR5O14804 337 aa17.4■□□□□ 0.38
SMDT1-202ENST00000422252 GCGP01275 180 aa17.4■□□□□ 0.38
SMDT1-202ENST00000422252 TMEM75Q8N9X5 138 aa17.4■□□□□ 0.38
SMDT1-202ENST00000422252 TXNDC17Q9BRA2 123 aa17.4■□□□□ 0.38
SMDT1-202ENST00000422252 C11orf21Q9P2W6 132 aa17.4■□□□□ 0.38
SMDT1-202ENST00000422252 HSPG2P98160 4391 aa17.39■□□□□ 0.37
SMDT1-202ENST00000422252 A0A1W2PRE2 83 aa17.39■□□□□ 0.37
SMDT1-202ENST00000422252 PFN1P07737 140 aaKnown RBP17.39■□□□□ 0.37
SMDT1-202ENST00000422252 ZFP69Q49AA0 526 aa17.39■□□□□ 0.37
SMDT1-202ENST00000422252 PRNTQ86SH4 94 aa17.39■□□□□ 0.37
SMDT1-202ENST00000422252 FBLL1A6NHQ2 334 aaKnown RBP17.38■□□□□ 0.37
SMDT1-202ENST00000422252 KRTAP10-2P60368 255 aa17.38■□□□□ 0.37
SMDT1-202ENST00000422252 SMUG1Q53HV7 270 aa17.38■□□□□ 0.37
SMDT1-202ENST00000422252 LY96Q9Y6Y9 160 aa17.38■□□□□ 0.37
SMDT1-202ENST00000422252 TRAV9-2A0A087WT02 112 aa17.37■□□□□ 0.37
SMDT1-202ENST00000422252 CTXND1A0A1B0GTU2 59 aa17.37■□□□□ 0.37
SMDT1-202ENST00000422252 ZNF726P1Q15940 193 aa17.37■□□□□ 0.37
SMDT1-202ENST00000422252 GATA1P15976 413 aaPredicted RBP17.36■□□□□ 0.37
SMDT1-202ENST00000422252 ZNF876PQ49A33 203 aa17.36■□□□□ 0.37
SMDT1-202ENST00000422252 SAPCD1Q5SSQ6 148 aa17.36■□□□□ 0.37
SMDT1-202ENST00000422252 WFDC10BQ8IUB3 73 aa17.36■□□□□ 0.37
SMDT1-202ENST00000422252 LOC100131303A0A0U1RQF7 123 aa17.35■□□□□ 0.37
SMDT1-202ENST00000422252 RGS21Q2M5E4 152 aa17.35■□□□□ 0.37
SMDT1-202ENST00000422252 SH2D6Q7Z4S9 175 aa17.35■□□□□ 0.37
SMDT1-202ENST00000422252 C9orf85Q96MD7 179 aa17.35■□□□□ 0.37
SMDT1-202ENST00000422252 G3V3Q6 166 aa17.34■□□□□ 0.37
SMDT1-202ENST00000422252 K7EP13 123 aa17.34■□□□□ 0.37
SMDT1-202ENST00000422252 NFE4Q86UQ8 179 aa17.34■□□□□ 0.37
SMDT1-202ENST00000422252 TNFRSF18Q9Y5U5 241 aa17.34■□□□□ 0.37
SMDT1-202ENST00000422252 CIDEAO60543 219 aa17.33■□□□□ 0.36
SMDT1-202ENST00000422252 AKR1C8PQ5T2L2 129 aa17.33■□□□□ 0.36
SMDT1-202ENST00000422252 CFAP126Q5VTH2 177 aa17.33■□□□□ 0.36
SMDT1-202ENST00000422252 NHLRC2Q8NBF2 726 aa17.33■□□□□ 0.36
SMDT1-202ENST00000422252 LINC00479Q96M42 142 aa17.33■□□□□ 0.36
SMDT1-202ENST00000422252 TRAV34A0A0B4J273 112 aa17.32■□□□□ 0.36
SMDT1-202ENST00000422252 RS1O15537 224 aa17.32■□□□□ 0.36
SMDT1-202ENST00000422252 IFNA7P01567 189 aa17.32■□□□□ 0.36
SMDT1-202ENST00000422252 DNAH10OSP0CZ25 163 aa17.32■□□□□ 0.36
SMDT1-202ENST00000422252 EVI2AP22794 236 aa17.32■□□□□ 0.36
SMDT1-202ENST00000422252 UBE2G2P60604 165 aa17.32■□□□□ 0.36
SMDT1-202ENST00000422252 DPPA3Q6W0C5 159 aa17.32■□□□□ 0.36
SMDT1-202ENST00000422252 KRTAP4-5Q9BYR2 181 aa17.32■□□□□ 0.36
SMDT1-202ENST00000422252 RNASE3P12724 160 aaKnown RBP17.31■□□□□ 0.36
SMDT1-202ENST00000422252 PPT1P50897 306 aa17.31■□□□□ 0.36
SMDT1-202ENST00000422252 SLC25A29Q8N8R3 303 aa17.31■□□□□ 0.36
SMDT1-202ENST00000422252 PTH2Q96A98 100 aa17.31■□□□□ 0.36
SMDT1-202ENST00000422252 ARL2-SNX15V9GYD0 113 aa17.31■□□□□ 0.36
SMDT1-202ENST00000422252 ARPC5O15511 151 aa17.3■□□□□ 0.36
SMDT1-202ENST00000422252 FGF8P55075 233 aaPredicted RBP17.3■□□□□ 0.36
SMDT1-202ENST00000422252 TIRAPP58753 221 aa17.3■□□□□ 0.36
SMDT1-202ENST00000422252 ERVFC1-1P60608 527 aa17.3■□□□□ 0.36
SMDT1-202ENST00000422252 ZNF506Q5JVG8 444 aa17.3■□□□□ 0.36
SMDT1-202ENST00000422252 NKX6-2Q9C056 277 aaPredicted RBP17.3■□□□□ 0.36
SMDT1-202ENST00000422252 DNAH5Q8TE73 4624 aa17.3■□□□□ 0.36
SMDT1-202ENST00000422252 ABCA13Q86UQ4 5058 aa17.29■□□□□ 0.36
SMDT1-202ENST00000422252 PGPEP1LA6NFU8 196 aa17.29■□□□□ 0.36
SMDT1-202ENST00000422252 FAM74A7A6NL05 159 aa17.29■□□□□ 0.36
SMDT1-202ENST00000422252 PEX7O00628 323 aa17.29■□□□□ 0.36
SMDT1-202ENST00000422252 EREGO14944 169 aa17.29■□□□□ 0.36
SMDT1-202ENST00000422252 MAPKAPK5-AS1Q8N8E1 139 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms