RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 TRAV8-1A0A0A6YYK1 113 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 A0A1B0GWB2 263 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 MEIS3P1A6NDR6 274 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 CFDP00746 253 aaPredicted RBP3.09□□□□□ -1.91
SFXN1-202ENST00000421887 IGKV1-39P01597 117 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 PMP2P02689 132 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 IGKV1D-39P04432 117 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 PGAM2P15259 253 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 HRH1P35367 487 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 TAS2R46P59540 309 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 FABP5Q01469 135 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 ZNF846Q147U1 533 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 UFSP1Q6NVU6 142 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 GPX8Q8TED1 209 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 RPUSD4Q96CM3 377 aaKnown RBP3.09□□□□□ -1.91
SFXN1-202ENST00000421887 SLC35E1Q96K37 410 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.09□□□□□ -1.91
SFXN1-202ENST00000421887 SSR3Q9UNL2 185 aa3.09□□□□□ -1.91
SFXN1-202ENST00000421887 TRAV8-2A0A0B4J237 113 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 TRAV1-2A0A0B4J238 106 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 A0A0J9YXV3 536 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 FABP12A6NFH5 140 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 GGTLC3B5MD39 225 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 TEX46H3BTG2 121 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 GOSR2O14653 212 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 PPP1R2P9O14990 202 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 SPINK4O60575 86 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 RPL7P18124 248 aaKnown RBP3.08□□□□□ -1.92
SFXN1-202ENST00000421887 ORM2P19652 201 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 CXCL3P19876 107 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 BCAP31P51572 246 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 TCL1AP56279 114 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 ZFP1Q6P2D0 407 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 C10orf67Q8IYJ2 551 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 C8orf59Q8N0T1 100 aaPredicted RBP3.08□□□□□ -1.92
SFXN1-202ENST00000421887 ARRDC1Q8N5I2 433 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 EIF4E3Q8N5X7 224 aaKnown RBP3.08□□□□□ -1.92
SFXN1-202ENST00000421887 TMEM147Q9BVK8 224 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 PARD6GQ9BYG4 376 aaPredicted RBP3.08□□□□□ -1.92
SFXN1-202ENST00000421887 FXYD6Q9H0Q3 95 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 SH3BGRL3Q9H299 93 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 MRPL16Q9NX20 251 aaKnown RBP3.08□□□□□ -1.92
SFXN1-202ENST00000421887 SCN3BQ9NY72 215 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 CACFD1Q9UGQ2 172 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 KLF12Q9Y4X4 402 aa3.08□□□□□ -1.92
SFXN1-202ENST00000421887 IGKV2D-24A0A075B6R9 120 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 IGKV1-5P01602 117 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 PFN1P07737 140 aaKnown RBP3.07□□□□□ -1.92
SFXN1-202ENST00000421887 RAB11AP62491 216 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 MLLT11Q13015 90 aaPredicted RBP3.07□□□□□ -1.92
SFXN1-202ENST00000421887 GPR107Q5VW38 600 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 C22orf42Q6IC83 251 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 S100A7AQ86SG5 101 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 C11orf72Q8NBR9 251 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 C7orf33Q8WU49 177 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 IL22RA2Q969J5 263 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 ZC2HC1AQ96GY0 325 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 ATP5SQ99766 215 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 RHBDL2Q9NX52 303 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 DHRS4-AS1Q9P1J3 65 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 LSM2Q9Y333 95 aaKnown RBP3.07□□□□□ -1.92
SFXN1-202ENST00000421887 URGCP-MRPS24S4R325 110 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 U3KQ87 197 aa3.07□□□□□ -1.92
SFXN1-202ENST00000421887 IGKV1OR2-108A0A075B7D4 117 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 A0A0A6YYH2 397 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 C3orf85A0A1B0GTC6 90 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 C7orf71A4D174 169 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 A6NJ64 397 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 TAAR5O14804 337 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 MPDU1O75352 247 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 SLC25A5P05141 298 aaKnown RBP3.06□□□□□ -1.92
SFXN1-202ENST00000421887 KRTAP1-4P0C5Y4 121 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 SFTA3P0C7M3 94 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 SEC11BP0C7V7 166 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 GPX4P36969 197 aaPredicted RBP3.06□□□□□ -1.92
SFXN1-202ENST00000421887 IBA57Q5T440 356 aaKnown RBP3.06□□□□□ -1.92
SFXN1-202ENST00000421887 ACOT7LQ6ZUV0 252 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 IQCF2Q8IXL9 164 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 LGI3Q8N145 548 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 MARCH1Q8TCQ1 289 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 ZNF431Q8TF32 576 aaPredicted RBP3.06□□□□□ -1.92
SFXN1-202ENST00000421887 C2orf50Q96LR7 162 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 TRGV9Q99603 122 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 MGLLQ99685 303 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 SLC50A1Q9BRV3 221 aa3.06□□□□□ -1.92
SFXN1-202ENST00000421887 FSIP2Q5CZC0 6907 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 IGKV1D-37A0A075B6S9 117 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 PANO1I0J062 215 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 MBP02144 154 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 GPX1P07203 203 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 OR5G3P0C626 314 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 HLA-DMAP28067 261 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 RCVRNP35243 200 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 PIGPP57054 158 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 NMSQ5H8A3 153 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 LCN15Q6UWW0 184 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 C2orf66Q6UXQ4 117 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 Q6ZN92 141 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 CCDC71LQ8N9Z2 235 aa3.05□□□□□ -1.92
SFXN1-202ENST00000421887 OR10P1Q8NGE3 313 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms