RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 CARD19Q96LW7 228 aa11.4□□□□□ -0.58
CHRD-204ENST00000420973 TNFRSF6BO95407 300 aa11.4□□□□□ -0.59
CHRD-204ENST00000420973 ATP5IP56385 69 aaPredicted RBP11.4□□□□□ -0.59
CHRD-204ENST00000420973 C10orf113Q5VZT2 155 aa11.4□□□□□ -0.59
CHRD-204ENST00000420973 SRD5A1P18405 259 aa11.39□□□□□ -0.59
CHRD-204ENST00000420973 SMCPP49901 116 aaPredicted RBP11.39□□□□□ -0.59
CHRD-204ENST00000420973 BRD3OSQ6XYD6 125 aa11.39□□□□□ -0.59
CHRD-204ENST00000420973 TMEM160Q9NX00 188 aa11.39□□□□□ -0.59
CHRD-204ENST00000420973 C9JAW5 83 aa11.39□□□□□ -0.59
CHRD-204ENST00000420973 RPP21Q9H633 154 aaKnown RBP11.39□□□□□ -0.59
CHRD-204ENST00000420973 HIGD1AQ9Y241 93 aa11.39□□□□□ -0.59
CHRD-204ENST00000420973 CUBNO60494 3623 aa11.39□□□□□ -0.59
CHRD-204ENST00000420973 COL8A1P27658 744 aa11.39□□□□□ -0.59
CHRD-204ENST00000420973 LINC00305Q7Z4B0 112 aa11.39□□□□□ -0.59
CHRD-204ENST00000420973 DNAJC30Q96LL9 226 aa11.39□□□□□ -0.59
CHRD-204ENST00000420973 NDUFA4L2Q9NRX3 87 aa11.39□□□□□ -0.59
CHRD-204ENST00000420973 DPM3Q9P2X0 92 aa11.39□□□□□ -0.59
CHRD-204ENST00000420973 IGHV3-49A0A0A0MS15 119 aa11.38□□□□□ -0.59
CHRD-204ENST00000420973 FAM90A9PA6NNJ1 464 aa11.38□□□□□ -0.59
CHRD-204ENST00000420973 SRSF2Q01130 221 aaKnown RBP11.38□□□□□ -0.59
CHRD-204ENST00000420973 ZFP2Q6ZN57 461 aa11.38□□□□□ -0.59
CHRD-204ENST00000420973 VMO1Q7Z5L0 202 aa11.38□□□□□ -0.59
CHRD-204ENST00000420973 TMEM219Q86XT9 240 aa11.38□□□□□ -0.59
CHRD-204ENST00000420973 SIGLEC9Q9Y336 463 aa11.38□□□□□ -0.59
CHRD-204ENST00000420973 ZFP36P26651 326 aaKnown RBP11.38□□□□□ -0.59
CHRD-204ENST00000420973 ZC2HC1BQ5TFG8 222 aa11.38□□□□□ -0.59
CHRD-204ENST00000420973 C1orf159Q96HA4 380 aa11.38□□□□□ -0.59
CHRD-204ENST00000420973 IGF2BP2-AS1Q96M15 143 aa11.38□□□□□ -0.59
CHRD-204ENST00000420973 LINC01549A6NIU2 74 aa11.37□□□□□ -0.59
CHRD-204ENST00000420973 LY6EQ16553 131 aa11.37□□□□□ -0.59
CHRD-204ENST00000420973 RBPMS2Q6ZRY4 209 aaKnown RBP11.37□□□□□ -0.59
CHRD-204ENST00000420973 ANKRD29Q8N6D5 301 aa11.37□□□□□ -0.59
CHRD-204ENST00000420973 C15orf53Q8NAA6 179 aa11.37□□□□□ -0.59
CHRD-204ENST00000420973 OR10J6PQ8NGY7 276 aa11.37□□□□□ -0.59
CHRD-204ENST00000420973 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
CHRD-204ENST00000420973 CHD6Q8TD26 2715 aa11.37□□□□□ -0.59
CHRD-204ENST00000420973 A0A1B0GXF2 115 aa11.37□□□□□ -0.59
CHRD-204ENST00000420973 OOSP1A8MZH6 123 aa11.36□□□□□ -0.59
CHRD-204ENST00000420973 PEX7O00628 323 aa11.36□□□□□ -0.59
CHRD-204ENST00000420973 OR1L4Q8NGR5 311 aa11.36□□□□□ -0.59
CHRD-204ENST00000420973 PAXXQ9BUH6 204 aa11.36□□□□□ -0.59
CHRD-204ENST00000420973 C21orf62Q9NYP8 219 aa11.36□□□□□ -0.59
CHRD-204ENST00000420973 NPFFO15130 113 aa11.36□□□□□ -0.59
CHRD-204ENST00000420973 IGHV3-66A0A0C4DH42 116 aa11.36□□□□□ -0.59
CHRD-204ENST00000420973 KAAG1Q9UBP8 84 aa11.36□□□□□ -0.59
CHRD-204ENST00000420973 PRRC2AP48634 2157 aaKnown RBP11.35□□□□□ -0.59
CHRD-204ENST00000420973 DLX6P56179 175 aa11.35□□□□□ -0.59
CHRD-204ENST00000420973 SPANXA1Q9NS26 97 aa11.35□□□□□ -0.59
CHRD-204ENST00000420973 J3KT08 172 aa11.35□□□□□ -0.59
CHRD-204ENST00000420973 IGLV2-23P01705 113 aa11.35□□□□□ -0.59
CHRD-204ENST00000420973 HBDP02042 147 aa11.35□□□□□ -0.59
CHRD-204ENST00000420973 C8orf88P0DMB2 117 aa11.35□□□□□ -0.59
CHRD-204ENST00000420973 C2orf83Q53S99 150 aa11.35□□□□□ -0.59
CHRD-204ENST00000420973 KLK5Q9Y337 293 aaPredicted RBP11.35□□□□□ -0.59
CHRD-204ENST00000420973 HECTD1Q9ULT8 2610 aa11.35□□□□□ -0.59
CHRD-204ENST00000420973 CGB1A6NKQ9 187 aa11.34□□□□□ -0.59
CHRD-204ENST00000420973 PRSS46E5RG02 174 aa11.34□□□□□ -0.59
CHRD-204ENST00000420973 PIP4P2Q8N4L2 257 aa11.34□□□□□ -0.59
CHRD-204ENST00000420973 ITLN2Q8WWU7 325 aaPredicted RBP11.34□□□□□ -0.59
CHRD-204ENST00000420973 DYNAPQ8N1N2 210 aa11.34□□□□□ -0.59
CHRD-204ENST00000420973 IGKV3-7A0A075B6H7 116 aa11.34□□□□□ -0.59
CHRD-204ENST00000420973 PGPA6NDG6 321 aa11.34□□□□□ -0.59
CHRD-204ENST00000420973 IGLV1-47P01700 117 aa11.33□□□□□ -0.6
CHRD-204ENST00000420973 FAM231DQ6ZW35 169 aa11.33□□□□□ -0.6
CHRD-204ENST00000420973 HIGD1BQ9P298 99 aa11.33□□□□□ -0.6
CHRD-204ENST00000420973 FOXC2Q99958 501 aa11.33□□□□□ -0.6
CHRD-204ENST00000420973 TMEM78Q5T7P6 136 aa11.33□□□□□ -0.6
CHRD-204ENST00000420973 LYRM7Q5U5X0 104 aa11.33□□□□□ -0.6
CHRD-204ENST00000420973 DUX5Q96PT3 197 aa11.33□□□□□ -0.6
CHRD-204ENST00000420973 AAMDCQ9H7C9 122 aa11.33□□□□□ -0.6
CHRD-204ENST00000420973 VPS13CQ709C8 3753 aa11.32□□□□□ -0.6
CHRD-204ENST00000420973 D6R8Y8 96 aa11.32□□□□□ -0.6
CHRD-204ENST00000420973 NBR2O15453 112 aa11.32□□□□□ -0.6
CHRD-204ENST00000420973 IGKCP01834 107 aa11.32□□□□□ -0.6
CHRD-204ENST00000420973 POU2AF1Q16633 256 aa11.32□□□□□ -0.6
CHRD-204ENST00000420973 IGFL4Q6B9Z1 124 aa11.32□□□□□ -0.6
CHRD-204ENST00000420973 SCGB1D4Q6XE38 83 aa11.32□□□□□ -0.6
CHRD-204ENST00000420973 H7C2G1 150 aa11.31□□□□□ -0.6
CHRD-204ENST00000420973 PRR20EP86478 221 aa11.31□□□□□ -0.6
CHRD-204ENST00000420973 PRR20CP86479 221 aa11.31□□□□□ -0.6
CHRD-204ENST00000420973 PRR20DP86480 221 aa11.31□□□□□ -0.6
CHRD-204ENST00000420973 PRR20BP86481 221 aa11.31□□□□□ -0.6
CHRD-204ENST00000420973 PRR20AP86496 221 aa11.31□□□□□ -0.6
CHRD-204ENST00000420973 PRADC1Q9BSG0 188 aa11.31□□□□□ -0.6
CHRD-204ENST00000420973 TRAV2A0A0B4J234 112 aa11.31□□□□□ -0.6
CHRD-204ENST00000420973 TRAV8-4A0A0B4J246 113 aa11.31□□□□□ -0.6
CHRD-204ENST00000420973 A0A1B0GUT8 65 aa11.31□□□□□ -0.6
CHRD-204ENST00000420973 TMEM30BQ3MIR4 351 aa11.31□□□□□ -0.6
CHRD-204ENST00000420973 HERVK_113P63121 156 aa11.3□□□□□ -0.6
CHRD-204ENST00000420973 RIGQ13278 110 aa11.3□□□□□ -0.6
CHRD-204ENST00000420973 EXOC3-AS1Q8N2X6 119 aa11.3□□□□□ -0.6
CHRD-204ENST00000420973 RASL10AQ92737 203 aa11.3□□□□□ -0.6
CHRD-204ENST00000420973 CCL19Q99731 98 aa11.3□□□□□ -0.6
CHRD-204ENST00000420973 C1orf43Q9BWL3 253 aa11.3□□□□□ -0.6
CHRD-204ENST00000420973 TRAV40A0A0B4J280 105 aa11.3□□□□□ -0.6
CHRD-204ENST00000420973 ARMS2P0C7Q2 107 aa11.3□□□□□ -0.6
CHRD-204ENST00000420973 SAA4P35542 130 aa11.3□□□□□ -0.6
CHRD-204ENST00000420973 LINC00574Q9H8X3 128 aa11.3□□□□□ -0.6
CHRD-204ENST00000420973 FBXL19-AS1Q494R0 122 aa11.3□□□□□ -0.6
CHRD-204ENST00000420973 LINC00322Q6ZN03 302 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms