RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SMLR1H3BR10 107 aa11.81□□□□□ -0.52
MSH6-203ENST00000420813 NKX2-5P52952 324 aaPredicted RBP11.81□□□□□ -0.52
MSH6-203ENST00000420813 MBD2Q9UBB5 411 aa11.81□□□□□ -0.52
MSH6-203ENST00000420813 GYPEP15421 78 aa11.8□□□□□ -0.52
MSH6-203ENST00000420813 ACOT6Q3I5F7 207 aaPredicted RBP11.8□□□□□ -0.52
MSH6-203ENST00000420813 TXNDC17Q9BRA2 123 aa11.8□□□□□ -0.52
MSH6-203ENST00000420813 NAGKQ9UJ70 344 aa11.8□□□□□ -0.52
MSH6-203ENST00000420813 TRAV21A0A0B4J279 112 aa11.79□□□□□ -0.52
MSH6-203ENST00000420813 A0A1W2PPV4 95 aa11.79□□□□□ -0.52
MSH6-203ENST00000420813 C9JCJ5 164 aa11.79□□□□□ -0.52
MSH6-203ENST00000420813 G3V3Q6 166 aa11.79□□□□□ -0.52
MSH6-203ENST00000420813 M0R2P5 195 aa11.79□□□□□ -0.52
MSH6-203ENST00000420813 GOLT1AQ6ZVE7 132 aa11.79□□□□□ -0.52
MSH6-203ENST00000420813 RPH3ALQ9UNE2 315 aa11.79□□□□□ -0.52
MSH6-203ENST00000420813 TNFRSF18Q9Y5U5 241 aa11.79□□□□□ -0.52
MSH6-203ENST00000420813 IGHV3-16A0A0C4DH30 117 aa11.78□□□□□ -0.52
MSH6-203ENST00000420813 DNAH10OSP0CZ25 163 aa11.78□□□□□ -0.52
MSH6-203ENST00000420813 EVI2AP22794 236 aa11.78□□□□□ -0.52
MSH6-203ENST00000420813 SH2D6Q7Z4S9 175 aa11.78□□□□□ -0.52
MSH6-203ENST00000420813 WFDC10BQ8IUB3 73 aa11.78□□□□□ -0.52
MSH6-203ENST00000420813 OR4C5Q8NGB2 326 aa11.78□□□□□ -0.52
MSH6-203ENST00000420813 WFDC1Q9HC57 220 aa11.78□□□□□ -0.52
MSH6-203ENST00000420813 MSRB1Q9NZV6 116 aa11.78□□□□□ -0.52
MSH6-203ENST00000420813 GNRH2O43555 120 aa11.77□□□□□ -0.53
MSH6-203ENST00000420813 EIF3GO75821 320 aaKnown RBP eCLIP11.77□□□□□ -0.53
MSH6-203ENST00000420813 C9orf62Q8N4C0 152 aa11.77□□□□□ -0.53
MSH6-203ENST00000420813 KCNS1Q96KK3 526 aa11.77□□□□□ -0.53
MSH6-203ENST00000420813 SDF2L1Q9HCN8 221 aa11.77□□□□□ -0.53
MSH6-203ENST00000420813 TREM1Q9NP99 234 aa11.77□□□□□ -0.53
MSH6-203ENST00000420813 A0A087WTM6 91 aa11.76□□□□□ -0.53
MSH6-203ENST00000420813 SERTM2A0A1B0GWG4 89 aa11.76□□□□□ -0.53
MSH6-203ENST00000420813 TYMSP04818 313 aa11.76□□□□□ -0.53
MSH6-203ENST00000420813 TIRAPP58753 221 aa11.76□□□□□ -0.53
MSH6-203ENST00000420813 RAB2AP61019 212 aa11.76□□□□□ -0.53
MSH6-203ENST00000420813 C10orf126Q8N4M7 172 aa11.76□□□□□ -0.53
MSH6-203ENST00000420813 TVP23CQ96ET8 276 aa11.76□□□□□ -0.53
MSH6-203ENST00000420813 FXYD6-FXYD2A0A087WZ82 144 aa11.75□□□□□ -0.53
MSH6-203ENST00000420813 TRAV8-1A0A0A6YYK1 113 aa11.75□□□□□ -0.53
MSH6-203ENST00000420813 F6UZH7 168 aa11.75□□□□□ -0.53
MSH6-203ENST00000420813 OR10G9Q8NGN4 311 aa11.75□□□□□ -0.53
MSH6-203ENST00000420813 OR10G7Q8NGN6 311 aa11.75□□□□□ -0.53
MSH6-203ENST00000420813 HMSDA8MTL9 139 aa11.74□□□□□ -0.53
MSH6-203ENST00000420813 GATA1P15976 413 aaPredicted RBP11.74□□□□□ -0.53
MSH6-203ENST00000420813 OR11H4Q8NGC9 324 aa11.74□□□□□ -0.53
MSH6-203ENST00000420813 OR2G3Q8NGZ4 309 aa11.74□□□□□ -0.53
MSH6-203ENST00000420813 NDFIP1Q9BT67 221 aa11.74□□□□□ -0.53
MSH6-203ENST00000420813 HMGB3O15347 200 aaKnown RBP11.73□□□□□ -0.53
MSH6-203ENST00000420813 CIDEAO60543 219 aa11.73□□□□□ -0.53
MSH6-203ENST00000420813 CRYGDP07320 174 aa11.73□□□□□ -0.53
MSH6-203ENST00000420813 STAG3L2P0CL84 134 aa11.73□□□□□ -0.53
MSH6-203ENST00000420813 STAG3L3P0CL85 134 aa11.73□□□□□ -0.53
MSH6-203ENST00000420813 ARL14EPLP0DKL9 152 aa11.73□□□□□ -0.53
MSH6-203ENST00000420813 CDC34P49427 236 aaPredicted RBP11.73□□□□□ -0.53
MSH6-203ENST00000420813 GNG5P63218 68 aa11.73□□□□□ -0.53
MSH6-203ENST00000420813 C5orf17Q8NAS9 161 aa11.73□□□□□ -0.53
MSH6-203ENST00000420813 BOLA1Q9Y3E2 137 aa11.73□□□□□ -0.53
MSH6-203ENST00000420813 LOC100131303A0A0U1RQF7 123 aa11.72□□□□□ -0.53
MSH6-203ENST00000420813 EPM2AB3EWF7 344 aa11.72□□□□□ -0.53
MSH6-203ENST00000420813 FUSP35637 526 aaKnown RBP eCLIP11.72□□□□□ -0.53
MSH6-203ENST00000420813 Q5BKY6 102 aa11.72□□□□□ -0.53
MSH6-203ENST00000420813 NHLRC2Q8NBF2 726 aa11.72□□□□□ -0.53
MSH6-203ENST00000420813 SUN5Q8TC36 379 aa11.72□□□□□ -0.53
MSH6-203ENST00000420813 PSMG3Q9BT73 122 aaPredicted RBP11.72□□□□□ -0.53
MSH6-203ENST00000420813 IGHV3-38A0A0C4DH36 116 aa11.71□□□□□ -0.53
MSH6-203ENST00000420813 FBLL1A6NHQ2 334 aaKnown RBP11.71□□□□□ -0.53
MSH6-203ENST00000420813 K7EQM0 130 aa11.71□□□□□ -0.53
MSH6-203ENST00000420813 ARPC5O15511 151 aa11.71□□□□□ -0.53
MSH6-203ENST00000420813 TCRAP04437 139 aa11.71□□□□□ -0.53
MSH6-203ENST00000420813 PPT1P50897 306 aa11.71□□□□□ -0.53
MSH6-203ENST00000420813 XGP55808 180 aa11.71□□□□□ -0.53
MSH6-203ENST00000420813 ZNF345Q14585 488 aa11.71□□□□□ -0.53
MSH6-203ENST00000420813 TAAR5O14804 337 aa11.7□□□□□ -0.54
MSH6-203ENST00000420813 PFN1P07737 140 aaKnown RBP11.7□□□□□ -0.54
MSH6-203ENST00000420813 ZNF876PQ49A33 203 aa11.7□□□□□ -0.54
MSH6-203ENST00000420813 LINC01556Q5JQF7 62 aa11.7□□□□□ -0.54
MSH6-203ENST00000420813 RAB24Q969Q5 203 aa11.7□□□□□ -0.54
MSH6-203ENST00000420813 TNFSF18Q9UNG2 199 aa11.7□□□□□ -0.54
MSH6-203ENST00000420813 TRBV6-4A0A1B0GX49 114 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 RS1O15537 224 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 MBP02144 154 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 GCHFRP30047 84 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 ZNF80P51504 273 aaPredicted RBP11.69□□□□□ -0.54
MSH6-203ENST00000420813 KRTAP10-1P60331 282 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 SERF2P84101 59 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 RHOHQ15669 191 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 SLC25A29Q8N8R3 303 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 HSD17B11Q8NBQ5 300 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 PTH2Q96A98 100 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 SGK494Q96LW2 274 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 AQP10Q96PS8 301 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 PRADC1Q9BSG0 188 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 PSG8Q9UQ74 426 aa11.69□□□□□ -0.54
MSH6-203ENST00000420813 GCGP01275 180 aa11.68□□□□□ -0.54
MSH6-203ENST00000420813 ATP6V0CP27449 155 aa11.68□□□□□ -0.54
MSH6-203ENST00000420813 CFAP126Q5VTH2 177 aa11.68□□□□□ -0.54
MSH6-203ENST00000420813 C9orf85Q96MD7 179 aa11.68□□□□□ -0.54
MSH6-203ENST00000420813 TMEM167BQ9NRX6 74 aa11.68□□□□□ -0.54
MSH6-203ENST00000420813 TRAV8-6A0A0B4J262 113 aa11.67□□□□□ -0.54
MSH6-203ENST00000420813 A0A0D9SG52 128 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms