RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 INO80EQ8NBZ0 244 aaPredicted RBP4.88□□□□□ -1.63
HMGN1-205ENST00000419378 OR10G4Q8NGN3 311 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 OR10G9Q8NGN4 311 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 OR10G7Q8NGN6 311 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 OR2G3Q8NGZ4 309 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 LINC00477Q96M19 166 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 VGLL1Q99990 258 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 AGPAT4-IT1Q9H0P7 198 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 SH3BGRL3Q9H299 93 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 Q9H3A6 140 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 TNFSF18Q9UNG2 199 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 FAT2Q9NYQ8 4349 aa4.88□□□□□ -1.63
HMGN1-205ENST00000419378 A0A1W2PPV4 95 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 SLC25A5P05141 298 aaKnown RBP4.87□□□□□ -1.63
HMGN1-205ENST00000419378 NMBP08949 121 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 DEFB130BP0DP73 79 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 DEFB130AP0DP74 79 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 CDC34P49427 236 aaPredicted RBP4.87□□□□□ -1.63
HMGN1-205ENST00000419378 CD300CQ08708 224 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 PRR9Q5T870 116 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 ZFAND2AQ8N6M9 145 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 Q8TAT8 98 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 FAM210BQ96KR6 192 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 PYGO2Q9BRQ0 406 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 PSMG3Q9BT73 122 aaPredicted RBP4.87□□□□□ -1.63
HMGN1-205ENST00000419378 OTORQ9NRC9 128 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 ZNF492Q9P255 531 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 TIMM8BQ9Y5J9 83 aaPredicted RBP4.87□□□□□ -1.63
HMGN1-205ENST00000419378 HECTD4Q9Y4D8 3996 aa4.87□□□□□ -1.63
HMGN1-205ENST00000419378 TRBV7-9A0A0J9YWB2 115 aa4.86□□□□□ -1.63
HMGN1-205ENST00000419378 RBAKDNA6NC62 111 aa4.86□□□□□ -1.63
HMGN1-205ENST00000419378 HMGB3O15347 200 aaKnown RBP4.86□□□□□ -1.63
HMGN1-205ENST00000419378 ARPC5O15511 151 aa4.86□□□□□ -1.63
HMGN1-205ENST00000419378 ZNF324O75467 553 aaPredicted RBP4.86□□□□□ -1.63
HMGN1-205ENST00000419378 GPX1P07203 203 aa4.86□□□□□ -1.63
HMGN1-205ENST00000419378 STAG3L2P0CL84 134 aa4.86□□□□□ -1.63
HMGN1-205ENST00000419378 STAG3L3P0CL85 134 aa4.86□□□□□ -1.63
HMGN1-205ENST00000419378 ARL14EPLP0DKL9 152 aa4.86□□□□□ -1.63
HMGN1-205ENST00000419378 RNASE4P34096 147 aaKnown RBP4.86□□□□□ -1.63
HMGN1-205ENST00000419378 CSN1S1P47710 185 aa4.86□□□□□ -1.63
HMGN1-205ENST00000419378 ZNF138P52744 262 aa4.86□□□□□ -1.63
HMGN1-205ENST00000419378 RPL7L1Q6DKI1 246 aaKnown RBP4.86□□□□□ -1.63
HMGN1-205ENST00000419378 Q8N9P0 234 aaPredicted RBP4.86□□□□□ -1.63
HMGN1-205ENST00000419378 RXFP4Q8TDU9 374 aa4.86□□□□□ -1.63
HMGN1-205ENST00000419378 GNPNAT1Q96EK6 184 aaPredicted RBP4.86□□□□□ -1.63
HMGN1-205ENST00000419378 NOP10Q9NPE3 64 aaKnown RBP4.86□□□□□ -1.63
HMGN1-205ENST00000419378 BORCS7-ASMTA0A0B4J1R7 106 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 SNURFLB1AK76 121 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 SMLR1H3BR10 107 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 MBP02144 154 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 ATP5G1P05496 136 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 P0DMU3 169 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 FAM231AP0DMU4 169 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 FAM231CP0DMU5 169 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 VPREB1P12018 145 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 ATP5G3P48201 142 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 SERF2P84101 59 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 FAM74A1Q5RGS3 127 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 Q6ZQT7 251 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 SSX7Q7RTT5 188 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 LINC00612Q8N6U2 182 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 C11orf72Q8NBR9 251 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 ZNF680Q8NEM1 530 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 CMTM2Q8TAZ6 248 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 HYLS1Q96M11 299 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 LINC00467Q9BRT7 94 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 RPH3ALQ9UNE2 315 aa4.85□□□□□ -1.63
HMGN1-205ENST00000419378 DNAH17Q9UFH2 4485 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 PKHD1P08F94 4074 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 IGHV1OR15-1A0A075B7D0 117 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 PGPA6NDG6 321 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 F5H768 121 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 GCHFRP30047 84 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 DAZ2Q13117 558 aaKnown RBP4.84□□□□□ -1.63
HMGN1-205ENST00000419378 Q6ZTI0 123 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 GOLT1AQ6ZVE7 132 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 Q75L30 129 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 EIF4E3Q8N5X7 224 aaKnown RBP4.84□□□□□ -1.63
HMGN1-205ENST00000419378 POM121L12Q8N7R1 296 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 C15orf53Q8NAA6 179 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 SUN5Q8TC36 379 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 ST6GAL2Q96JF0 529 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 ACTR3CQ9C0K3 210 aaPredicted RBP4.84□□□□□ -1.63
HMGN1-205ENST00000419378 GSN-AS1Q9NRJ2 163 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 CYTL1Q9NRR1 136 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 TP53TG3Q9ULZ0 132 aa4.84□□□□□ -1.63
HMGN1-205ENST00000419378 TRAV8-1A0A0A6YYK1 113 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 GGTLC3B5MD39 225 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 TAAR5O14804 337 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 CXorf1O96002 111 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 TCL1AP56279 114 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 SNRPEP62304 92 aaKnown RBP4.83□□□□□ -1.64
HMGN1-205ENST00000419378 GNG5P63218 68 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 ZNF345Q14585 488 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 ZNF726P1Q15940 193 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 MUC21Q5SSG8 566 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 IBA57Q5T440 356 aaKnown RBP4.83□□□□□ -1.64
HMGN1-205ENST00000419378 Q6AWC8 147 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 UBE2DNLQ8IWF7 75 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 ARL6IP6Q8N6S5 226 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms