RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PRELID3AQ96N28 172 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 SCRT2Q9NQ03 307 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 PEMTQ9UBM1 199 aa6.77□□□□□ -1.33
LINCMD1-201ENST00000418518 IGKV3-7A0A075B6H7 116 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 LINC01546A6NGU7 62 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 D6R8Y8 96 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 TSTD3H0UI37 97 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 M0R2Z0 102 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 NDUFA7O95182 113 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 SCGB1D1O95968 90 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 CSN3P07498 182 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 LINC00614P0C842 121 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 C3orf79P0CE67 100 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 SRD5A1P18405 259 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 LEPP41159 167 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 DEFB136Q30KP8 78 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 TDRG1Q3Y452 100 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 PRR31Q5SQ13 230 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 FOXI2Q6ZQN5 318 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 Q6ZQT7 251 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 ZNF664Q8N3J9 261 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 DEFB125Q8N687 156 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 OR11H1Q8NG94 326 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 OR1N2Q8NGR9 330 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 OR10AG1Q8NH19 301 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 MSRB1Q9NZV6 116 aa6.76□□□□□ -1.33
LINCMD1-201ENST00000418518 HECTD1Q9ULT8 2610 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 HIVEP2P31629 2446 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 IGHV1-24A0A0C4DH33 117 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 CRXO43186 299 aaPredicted RBP6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 DUSP14O95147 198 aaKnown RBP6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 ZNF688P0C7X2 276 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 CD33P20138 364 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 ANXA2RQ3ZCQ2 193 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 PSMG4Q5JS54 123 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 EBLN2Q6P2I7 272 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 AMTNQ6UX39 209 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 KLHL30-AS1Q8NEE0 82 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 ZNF418Q8TF45 676 aaPredicted RBP6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 DPF1Q92782 380 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 SIGLEC8Q9NYZ4 499 aa6.75□□□□□ -1.33
LINCMD1-201ENST00000418518 MUC21A0A0G2JKD1 596 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 MUC21A0A140T8X8 626 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 C7orf71A4D174 169 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 PRSS47A8MTI9 375 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 H3BVH4 76 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 RNASE3P12724 160 aaKnown RBP6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 TSPOP30536 169 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 RNASE4P34096 147 aaKnown RBP6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 ASIPP42127 132 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 KRTDAPP60985 99 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 KIR3DS1Q14943 382 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 MUC21Q5SSG8 566 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 WFDC3Q8IUB2 231 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 LINC01006Q8NI28 216 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 DLX4Q92988 240 aaPredicted RBP6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 C20orf144Q9BQM9 153 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 WNK1Q9H4A3 2382 aa6.74□□□□□ -1.33
LINCMD1-201ENST00000418518 A0A096LNJ9 63 aa6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 TRAV25A0A0B4J276 109 aa6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 TCF21O43680 179 aa6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 NPYP01303 97 aa6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 BTF3P20290 206 aaKnown RBP6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 CKS2P33552 79 aa6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 FA2HQ7L5A8 372 aa6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 SMIM15Q7Z3B0 74 aa6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 POM121L12Q8N7R1 296 aa6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 RAX2Q96IS3 184 aa6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 CLUHP3Q96NS8 147 aa6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 TSSC4Q9Y5U2 329 aaPredicted RBP6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 SELENOKQ9Y6D0 94 aa6.73□□□□□ -1.33
LINCMD1-201ENST00000418518 LEPROTL1O95214 131 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 CD28P10747 220 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 HLA-DRB4P13762 266 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 DDTP30046 118 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 IFI27P40305 119 aaPredicted RBP6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 CDKN1BP46527 198 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 TFPI2P48307 235 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 PMCHL1Q16048 86 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 DEFB114Q30KQ6 69 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 KHDC1LQ5JSQ8 128 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 SPANXN1Q5VSR9 72 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 TMEM61Q8N0U2 210 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 NRACQ8N912 160 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 PRSS3P2Q8NHM4 247 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 MRAP2Q96G30 205 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 C9orf85Q96MD7 179 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 JMJD8Q96S16 334 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 SPAG8Q99932 426 aaPredicted RBP6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 TMEM70Q9BUB7 260 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 PRO1933Q9H354 126 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 MAP1LC3AQ9H492 121 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 HSPB8Q9UJY1 196 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 HLA-DRB4X5D2U9 266 aa6.72□□□□□ -1.33
LINCMD1-201ENST00000418518 IGLV2-18A0A075B6J9 118 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 SMKR1H3BMG3 65 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 J3KRW8 73 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 M0R381 172 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 CCL24O00175 119 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms