RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 PRELID1Q9Y255 219 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 ZNF256Q9Y2P7 627 aaPredicted RBP4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 ZNF705FA8MVS1 300 aaPredicted RBP4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 M0R3E3 92 aa4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 PDE6DO43924 150 aa4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 NDUFS6O75380 124 aaKnown RBP4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 TCRAP04437 139 aa4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 HLA-DMBP28068 263 aa4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 CMC4P56277 68 aaPredicted RBP4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 PSMG4Q5JS54 123 aa4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 FAM24BQ8N5W8 94 aa4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 ARL6IP6Q8N6S5 226 aa4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 C5orf17Q8NAS9 161 aa4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 CMTM2Q8TAZ6 248 aa4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 HIST1H2BAQ96A08 127 aa4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 RPUSD4Q96CM3 377 aaKnown RBP4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 LINC00479Q96M42 142 aa4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 SORL1Q92673 2214 aa4.29□□□□□ -1.72
NIFKP3-201ENST00000417799 TRRAPQ9Y4A5 3859 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 VWFP04275 2813 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 C9JQL5 133 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 F6UZH7 168 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 TMEM250H0YL14 139 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 PEX7O00628 323 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 SRP19P09132 144 aaKnown RBP4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 ZNF688P0C7X2 276 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 PRB4P10163 310 aaPredicted RBP4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 GNG5P63218 68 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 NDUFA5Q16718 116 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 UQCC3Q6UW78 93 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 STHQ8IWL8 128 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 EIF4E3Q8N5X7 224 aaKnown RBP4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 ZNF738Q8NE65 137 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 C11orf45Q8TAV5 145 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 SLC35B3Q9H1N7 401 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 TREM1Q9NP99 234 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 ZMAT5Q9UDW3 170 aaKnown RBP4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 RPH3ALQ9UNE2 315 aa4.28□□□□□ -1.72
NIFKP3-201ENST00000417799 IGKV2-40A0A087WW87 121 aaPredicted RBP4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 SERTM2A0A1B0GWG4 89 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 RBAKDNA6NC62 111 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 OR11H12B2RN74 326 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 K7EQM0 130 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 NXPH4O95158 308 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 IGKV2D-40P01614 121 aaPredicted RBP4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 S100A9P06702 114 aaKnown RBP4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 CD7P09564 240 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 AKR1C3P42330 323 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 CNN1P51911 297 aaKnown RBP4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 DEFB131AP59861 70 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 DEFB1P60022 68 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 EGFEM1PQ0D2K5 195 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 EBLN2Q6P2I7 272 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 FOXI2Q6ZQN5 318 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 GOLT1AQ6ZVE7 132 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 SLC7A5P1Q8MH63 180 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 CYB561D1Q8N8Q1 229 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 OR8A1Q8NGG7 326 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 OR10J6PQ8NGY7 276 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 C11orf52Q96A22 123 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 VGLL1Q99990 258 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 SAV1Q9H4B6 383 aaPredicted RBP4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 KLF12Q9Y4X4 402 aa4.27□□□□□ -1.73
NIFKP3-201ENST00000417799 ANK2Q01484 3957 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 A0A0J9YX75 114 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 FBLL1A6NHQ2 334 aaKnown RBP4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 KNCNA6PVL3 124 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 F6UB75 175 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 G3V4G9 280 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 ATP6V1G1O75348 118 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 DUSP14O95147 198 aaKnown RBP4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 SFTA3P0C7M3 94 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 ZNF705DP0CH99 300 aaPredicted RBP4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 ZNF705BP0CI00 300 aaPredicted RBP4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 RPL35P42766 123 aaKnown RBP4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 CEBPGP53567 150 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 TAS2R60P59551 318 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 HIST1H1AQ02539 215 aaPredicted RBP4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 ERCC8Q13216 396 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 TMEM183BQ1AE95 376 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 C14orf177Q52M58 125 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 SOHLH1Q5JUK2 328 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 ACTL10Q5JWF8 245 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 GDF5OSQ5U4N7 250 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 GTSCR1Q86UQ5 136 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 APRG1Q8IVJ8 170 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 TMEM75Q8N9X5 138 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 FMC1Q96HJ9 113 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 LINC00477Q96M19 166 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 DERL1Q9BUN8 251 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 AGPAT4-IT1Q9H0P7 198 aa4.26□□□□□ -1.73
NIFKP3-201ENST00000417799 TRAV8-1A0A0A6YYK1 113 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 TRBV6-1A0A0K0K1D8 114 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 TMEM218A2RU14 115 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 ZNF727A8MUV8 499 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 H3BMM0 161 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 LTAP01374 205 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms