RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 SFTA3P0C7M3 94 aa12.59□□□□□ -0.39
VPS16-204ENST00000417508 ARL14EPLP0DKL9 152 aa12.59□□□□□ -0.39
VPS16-204ENST00000417508 Q6ZRN7 208 aaPredicted RBP12.59□□□□□ -0.39
VPS16-204ENST00000417508 SH2D6Q7Z4S9 175 aa12.59□□□□□ -0.39
VPS16-204ENST00000417508 C5orf17Q8NAS9 161 aa12.59□□□□□ -0.39
VPS16-204ENST00000417508 HSD17B11Q8NBQ5 300 aa12.59□□□□□ -0.39
VPS16-204ENST00000417508 OR4C5Q8NGB2 326 aa12.59□□□□□ -0.39
VPS16-204ENST00000417508 TVP23CQ96ET8 276 aa12.59□□□□□ -0.39
VPS16-204ENST00000417508 TXNDC17Q9BRA2 123 aa12.59□□□□□ -0.39
VPS16-204ENST00000417508 SDF2L1Q9HCN8 221 aa12.59□□□□□ -0.39
VPS16-204ENST00000417508 C9JCJ5 164 aa12.58□□□□□ -0.4
VPS16-204ENST00000417508 HMGB3O15347 200 aaKnown RBP12.58□□□□□ -0.4
VPS16-204ENST00000417508 GYPEP15421 78 aa12.58□□□□□ -0.4
VPS16-204ENST00000417508 RYR1P21817 5038 aa12.58□□□□□ -0.4
VPS16-204ENST00000417508 RAB24Q969Q5 203 aa12.58□□□□□ -0.4
VPS16-204ENST00000417508 TNFSF18Q9UNG2 199 aa12.58□□□□□ -0.4
VPS16-204ENST00000417508 TRAV8-1A0A0A6YYK1 113 aa12.57□□□□□ -0.4
VPS16-204ENST00000417508 FBLL1A6NHQ2 334 aaKnown RBP12.57□□□□□ -0.4
VPS16-204ENST00000417508 EREGO14944 169 aa12.57□□□□□ -0.4
VPS16-204ENST00000417508 CIDEAO60543 219 aa12.57□□□□□ -0.4
VPS16-204ENST00000417508 TYMSP04818 313 aa12.57□□□□□ -0.4
VPS16-204ENST00000417508 ATP6V0CP27449 155 aa12.57□□□□□ -0.4
VPS16-204ENST00000417508 TMEM167BQ9NRX6 74 aa12.57□□□□□ -0.4
VPS16-204ENST00000417508 PGPEP1Q9NXJ5 209 aa12.57□□□□□ -0.4
VPS16-204ENST00000417508 LY96Q9Y6Y9 160 aa12.57□□□□□ -0.4
VPS16-204ENST00000417508 TAAR5O14804 337 aa12.56□□□□□ -0.4
VPS16-204ENST00000417508 CXorf1O96002 111 aa12.56□□□□□ -0.4
VPS16-204ENST00000417508 TCRAP04437 139 aa12.56□□□□□ -0.4
VPS16-204ENST00000417508 GCHFRP30047 84 aa12.56□□□□□ -0.4
VPS16-204ENST00000417508 GNG5P63218 68 aa12.56□□□□□ -0.4
VPS16-204ENST00000417508 ACTR3CQ9C0K3 210 aaPredicted RBP12.56□□□□□ -0.4
VPS16-204ENST00000417508 F6UZH7 168 aa12.55□□□□□ -0.4
VPS16-204ENST00000417508 EVI2AP22794 236 aa12.55□□□□□ -0.4
VPS16-204ENST00000417508 KRTAP10-2P60368 255 aa12.55□□□□□ -0.4
VPS16-204ENST00000417508 SUMO1P63165 101 aaKnown RBP12.55□□□□□ -0.4
VPS16-204ENST00000417508 INO80EQ8NBZ0 244 aaPredicted RBP12.55□□□□□ -0.4
VPS16-204ENST00000417508 BOLA1Q9Y3E2 137 aa12.55□□□□□ -0.4
VPS16-204ENST00000417508 GIPP09681 153 aaPredicted RBP12.54□□□□□ -0.4
VPS16-204ENST00000417508 TIRAPP58753 221 aa12.54□□□□□ -0.4
VPS16-204ENST00000417508 EPDR1Q9UM22 224 aa12.54□□□□□ -0.4
VPS16-204ENST00000417508 PSG8Q9UQ74 426 aa12.54□□□□□ -0.4
VPS16-204ENST00000417508 BORCS7-ASMTA0A0B4J1R7 106 aa12.53□□□□□ -0.4
VPS16-204ENST00000417508 PFN1P07737 140 aaKnown RBP12.53□□□□□ -0.4
VPS16-204ENST00000417508 ERVFC1-1P60608 527 aa12.53□□□□□ -0.4
VPS16-204ENST00000417508 SMUG1Q53HV7 270 aa12.53□□□□□ -0.4
VPS16-204ENST00000417508 SAPCD1Q5SSQ6 148 aa12.53□□□□□ -0.4
VPS16-204ENST00000417508 MAPKAPK5-AS1Q8N8E1 139 aa12.53□□□□□ -0.4
VPS16-204ENST00000417508 PTH2Q96A98 100 aa12.53□□□□□ -0.4
VPS16-204ENST00000417508 KRTAP4-5Q9BYR2 181 aa12.53□□□□□ -0.4
VPS16-204ENST00000417508 A0A1W2PRE2 83 aa12.52□□□□□ -0.41
VPS16-204ENST00000417508 DNAH10OSP0CZ25 163 aa12.52□□□□□ -0.41
VPS16-204ENST00000417508 GATA1P15976 413 aaPredicted RBP12.52□□□□□ -0.41
VPS16-204ENST00000417508 FLI1Q01543 452 aaPredicted RBP12.52□□□□□ -0.41
VPS16-204ENST00000417508 ZNF876PQ49A33 203 aa12.52□□□□□ -0.41
VPS16-204ENST00000417508 ZFP69Q49AA0 526 aa12.52□□□□□ -0.41
VPS16-204ENST00000417508 CDPF1Q6NVV7 123 aa12.52□□□□□ -0.41
VPS16-204ENST00000417508 C10orf126Q8N4M7 172 aa12.52□□□□□ -0.41
VPS16-204ENST00000417508 CYB561D1Q8N8Q1 229 aa12.52□□□□□ -0.41
VPS16-204ENST00000417508 TMEM75Q8N9X5 138 aa12.52□□□□□ -0.41
VPS16-204ENST00000417508 SGK494Q96LW2 274 aa12.52□□□□□ -0.41
VPS16-204ENST00000417508 MSRB1Q9NZV6 116 aa12.52□□□□□ -0.41
VPS16-204ENST00000417508 GCGP01275 180 aa12.51□□□□□ -0.41
VPS16-204ENST00000417508 IGLV2-11P01706 119 aa12.51□□□□□ -0.41
VPS16-204ENST00000417508 ZNF80P51504 273 aaPredicted RBP12.51□□□□□ -0.41
VPS16-204ENST00000417508 Q5BKY6 102 aa12.51□□□□□ -0.41
VPS16-204ENST00000417508 Q8N1X5 172 aa12.51□□□□□ -0.41
VPS16-204ENST00000417508 RS1O15537 224 aa12.5□□□□□ -0.41
VPS16-204ENST00000417508 WFDC10BQ8IUB3 73 aa12.5□□□□□ -0.41
VPS16-204ENST00000417508 PRADC1Q9BSG0 188 aa12.5□□□□□ -0.41
VPS16-204ENST00000417508 NKX6-2Q9C056 277 aaPredicted RBP12.5□□□□□ -0.41
VPS16-204ENST00000417508 SH3BGRL3Q9H299 93 aa12.5□□□□□ -0.41
VPS16-204ENST00000417508 C11orf21Q9P2W6 132 aa12.5□□□□□ -0.41
VPS16-204ENST00000417508 TNFRSF18Q9Y5U5 241 aa12.5□□□□□ -0.41
VPS16-204ENST00000417508 TRBV6-4A0A1B0GX49 114 aa12.49□□□□□ -0.41
VPS16-204ENST00000417508 GGTLC3B5MD39 225 aa12.49□□□□□ -0.41
VPS16-204ENST00000417508 CFAP126Q5VTH2 177 aa12.49□□□□□ -0.41
VPS16-204ENST00000417508 RPL7L1Q6DKI1 246 aaKnown RBP12.49□□□□□ -0.41
VPS16-204ENST00000417508 PRNTQ86SH4 94 aa12.49□□□□□ -0.41
VPS16-204ENST00000417508 NHLRC2Q8NBF2 726 aa12.49□□□□□ -0.41
VPS16-204ENST00000417508 C9orf85Q96MD7 179 aa12.49□□□□□ -0.41
VPS16-204ENST00000417508 LRP1BQ9NZR2 4599 aa12.48□□□□□ -0.41
VPS16-204ENST00000417508 CTXND1A0A1B0GTU2 59 aa12.48□□□□□ -0.41
VPS16-204ENST00000417508 SLC25A29Q8N8R3 303 aa12.48□□□□□ -0.41
VPS16-204ENST00000417508 FXYD6-FXYD2A0A087WZ82 144 aa12.47□□□□□ -0.41
VPS16-204ENST00000417508 LOC100131303A0A0U1RQF7 123 aa12.47□□□□□ -0.41
VPS16-204ENST00000417508 RNF222A6NCQ9 220 aa12.47□□□□□ -0.41
VPS16-204ENST00000417508 CRYGDP07320 174 aa12.47□□□□□ -0.41
VPS16-204ENST00000417508 PPT1P50897 306 aa12.47□□□□□ -0.41
VPS16-204ENST00000417508 RHOHQ15669 191 aa12.47□□□□□ -0.41
VPS16-204ENST00000417508 PIK3CD-AS1Q5SR53 167 aa12.47□□□□□ -0.41
VPS16-204ENST00000417508 A0A087WTM6 91 aa12.46□□□□□ -0.41
VPS16-204ENST00000417508 TRAV8-6A0A0B4J262 113 aa12.46□□□□□ -0.41
VPS16-204ENST00000417508 IGHV3-38A0A0C4DH36 116 aa12.46□□□□□ -0.41
VPS16-204ENST00000417508 FABP5P3A8MUU1 101 aa12.46□□□□□ -0.41
VPS16-204ENST00000417508 MGST1P10620 155 aaKnown RBP12.46□□□□□ -0.41
VPS16-204ENST00000417508 OR2T35Q8NGX2 323 aa12.46□□□□□ -0.41
VPS16-204ENST00000417508 SCRT2Q9NQ03 307 aa12.46□□□□□ -0.41
VPS16-204ENST00000417508 HSPG2P98160 4391 aa12.46□□□□□ -0.42
VPS16-204ENST00000417508 PGPEP1LA6NFU8 196 aa12.45□□□□□ -0.42
VPS16-204ENST00000417508 IFNA7P01567 189 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms