RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 HYPMO75409 117 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 ZNF324O75467 553 aaPredicted RBP6.28□□□□□ -1.4
LINC01238-201ENST00000416204 IFNA1P01562 189 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 LINC00869P0C866 280 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 CT45A10P0DMU9 189 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 FHITP49789 147 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 ZNF415Q09FC8 603 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 DAZ2Q13117 558 aaKnown RBP6.28□□□□□ -1.4
LINC01238-201ENST00000416204 ATRAIDQ6UW56 229 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 CYP2G1PQ6ZSU1 146 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 CLRN3Q8NCR9 226 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 DEFB104AQ8WTQ1 72 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 SFT2D1Q8WV19 159 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 Q9HAA7 133 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 KCNIP2Q9NS61 270 aa6.28□□□□□ -1.4
LINC01238-201ENST00000416204 TMA7Q9Y2S6 64 aaKnown RBP6.28□□□□□ -1.4
LINC01238-201ENST00000416204 A0A087X0K7 114 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 LRCOL1A6NCL2 159 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 C9JQL5 133 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 CRYGDP07320 174 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 FGF7P21781 194 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 EVI2AP22794 236 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 PPT1P50897 306 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 ACOT6Q3I5F7 207 aaPredicted RBP6.27□□□□□ -1.41
LINC01238-201ENST00000416204 LINC01620Q4KN68 170 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 PATE2Q6UY27 113 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 Q6ZQT7 251 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 C11orf72Q8NBR9 251 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 ACTR3CQ9C0K3 210 aaPredicted RBP6.27□□□□□ -1.41
LINC01238-201ENST00000416204 ZNF331Q9NQX6 463 aaPredicted RBP6.27□□□□□ -1.41
LINC01238-201ENST00000416204 TP53TG3Q9ULZ0 132 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 WDR83OSQ9Y284 106 aa6.27□□□□□ -1.41
LINC01238-201ENST00000416204 CTXND1A0A1B0GTU2 59 aa6.26□□□□□ -1.41
LINC01238-201ENST00000416204 MRPS12O15235 138 aaKnown RBP6.26□□□□□ -1.41
LINC01238-201ENST00000416204 SRP19P09132 144 aaKnown RBP6.26□□□□□ -1.41
LINC01238-201ENST00000416204 CRYBA4P53673 196 aa6.26□□□□□ -1.41
LINC01238-201ENST00000416204 ERCC8Q13216 396 aa6.26□□□□□ -1.41
LINC01238-201ENST00000416204 RHEBQ15382 184 aa6.26□□□□□ -1.41
LINC01238-201ENST00000416204 TEPPQ6URK8 271 aa6.26□□□□□ -1.41
LINC01238-201ENST00000416204 Q8N814 137 aa6.26□□□□□ -1.41
LINC01238-201ENST00000416204 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.26□□□□□ -1.41
LINC01238-201ENST00000416204 C20orf144Q9BQM9 153 aa6.26□□□□□ -1.41
LINC01238-201ENST00000416204 NPCDR1Q9BY65 106 aa6.26□□□□□ -1.41
LINC01238-201ENST00000416204 SMCO4Q9NRQ5 59 aa6.26□□□□□ -1.41
LINC01238-201ENST00000416204 SLC39A9Q9NUM3 307 aa6.26□□□□□ -1.41
LINC01238-201ENST00000416204 HHLA3Q9XRX5 114 aa6.26□□□□□ -1.41
LINC01238-201ENST00000416204 MAP1LC3B2A6NCE7 125 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 LECT2O14960 151 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 SPINK4O60575 86 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 BCL2P10415 239 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 S100A7P31151 101 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 RNASE4P34096 147 aaKnown RBP6.25□□□□□ -1.41
LINC01238-201ENST00000416204 LEPP41159 167 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 CCL20P78556 96 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 RAB31Q13636 194 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 FHL2Q14192 279 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 WFDC2Q14508 124 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 MRPL23Q16540 153 aaKnown RBP6.25□□□□□ -1.41
LINC01238-201ENST00000416204 FFAR4Q5NUL3 377 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 MORN5Q5VZ52 161 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 NEGR1Q7Z3B1 354 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 C15orf54Q8N8G6 183 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 NTN5Q8WTR8 489 aaPredicted RBP6.25□□□□□ -1.41
LINC01238-201ENST00000416204 PYGO2Q9BRQ0 406 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 MAP1LC3BQ9GZQ8 125 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 NPVFQ9HCQ7 196 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 MANBALQ9NQG1 85 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 PRO0255Q9UI72 69 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 VAX2Q9UIW0 290 aa6.25□□□□□ -1.41
LINC01238-201ENST00000416204 LOC100131303A0A0U1RQF7 123 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 FAM74A7A6NL05 159 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 B4DEV8 164 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 H3BQ15 152 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 K7EQD1 137 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 GYPEP15421 78 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 SRIP30626 198 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 PNRC1Q12796 327 aaPredicted RBP6.24□□□□□ -1.41
LINC01238-201ENST00000416204 ZNF726P1Q15940 193 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 FAM74A3Q4VXF1 159 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 LCN15Q6UWW0 184 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 OR10G9Q8NGN4 311 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 OR10G7Q8NGN6 311 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 TXNDC17Q9BRA2 123 aa6.24□□□□□ -1.41
LINC01238-201ENST00000416204 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.23□□□□□ -1.41
LINC01238-201ENST00000416204 A0A087WWC5 75 aa6.23□□□□□ -1.41
LINC01238-201ENST00000416204 TRAV5A0A0B4J249 113 aa6.23□□□□□ -1.41
LINC01238-201ENST00000416204 TRGV4A0A0C4DH28 118 aa6.23□□□□□ -1.41
LINC01238-201ENST00000416204 LOC105371267A0A1B0GV96 52 aa6.23□□□□□ -1.41
LINC01238-201ENST00000416204 C7orf71A4D174 169 aa6.23□□□□□ -1.41
LINC01238-201ENST00000416204 M0R036 132 aa6.23□□□□□ -1.41
LINC01238-201ENST00000416204 RPL29P47914 159 aaKnown RBP6.23□□□□□ -1.41
LINC01238-201ENST00000416204 SCXQ7RTU7 201 aa6.23□□□□□ -1.41
LINC01238-201ENST00000416204 LINC00305Q7Z4B0 112 aa6.23□□□□□ -1.41
LINC01238-201ENST00000416204 RPS10P5Q9NQ39 176 aa6.23□□□□□ -1.41
LINC01238-201ENST00000416204 GNG13Q9P2W3 67 aa6.23□□□□□ -1.41
LINC01238-201ENST00000416204 A0A1B0GV50 99 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 C7orf77A4D0Y5 90 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 TMEM250H0YL14 139 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 M0R3E3 92 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 IGHV3-30P01768 117 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms