RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 NDFIP1Q9BT67 221 aa12.03□□□□□ -0.48
PDLIM2-208ENST00000416159 F6UZH7 168 aa12.02□□□□□ -0.49
PDLIM2-208ENST00000416159 K7EQD1 137 aa12.02□□□□□ -0.49
PDLIM2-208ENST00000416159 GYPEP15421 78 aa12.02□□□□□ -0.49
PDLIM2-208ENST00000416159 ATP6V0CP27449 155 aa12.02□□□□□ -0.49
PDLIM2-208ENST00000416159 C5orf17Q8NAS9 161 aa12.02□□□□□ -0.49
PDLIM2-208ENST00000416159 OR4C5Q8NGB2 326 aa12.02□□□□□ -0.49
PDLIM2-208ENST00000416159 SUN5Q8TC36 379 aa12.02□□□□□ -0.49
PDLIM2-208ENST00000416159 RAB24Q969Q5 203 aa12.02□□□□□ -0.49
PDLIM2-208ENST00000416159 SDF2L1Q9HCN8 221 aa12.02□□□□□ -0.49
PDLIM2-208ENST00000416159 TRAV9-2A0A087WT02 112 aa12.01□□□□□ -0.49
PDLIM2-208ENST00000416159 K7EQM0 130 aa12.01□□□□□ -0.49
PDLIM2-208ENST00000416159 TYMSP04818 313 aa12.01□□□□□ -0.49
PDLIM2-208ENST00000416159 GCHFRP30047 84 aa12.01□□□□□ -0.49
PDLIM2-208ENST00000416159 Q6ZRN7 208 aaPredicted RBP12.01□□□□□ -0.49
PDLIM2-208ENST00000416159 TXNDC17Q9BRA2 123 aa12.01□□□□□ -0.49
PDLIM2-208ENST00000416159 C9JCJ5 164 aa12□□□□□ -0.49
PDLIM2-208ENST00000416159 TCRAP04437 139 aa12□□□□□ -0.49
PDLIM2-208ENST00000416159 KRTAP10-2P60368 255 aa12□□□□□ -0.49
PDLIM2-208ENST00000416159 ASB13Q8WXK3 278 aa12□□□□□ -0.49
PDLIM2-208ENST00000416159 SGK494Q96LW2 274 aa12□□□□□ -0.49
PDLIM2-208ENST00000416159 TMEM167BQ9NRX6 74 aa12□□□□□ -0.49
PDLIM2-208ENST00000416159 TNFSF18Q9UNG2 199 aa12□□□□□ -0.49
PDLIM2-208ENST00000416159 LY96Q9Y6Y9 160 aa12□□□□□ -0.49
PDLIM2-208ENST00000416159 K7EP13 123 aa11.99□□□□□ -0.49
PDLIM2-208ENST00000416159 CXorf1O96002 111 aa11.99□□□□□ -0.49
PDLIM2-208ENST00000416159 GIPP09681 153 aaPredicted RBP11.99□□□□□ -0.49
PDLIM2-208ENST00000416159 NFE4Q86UQ8 179 aa11.99□□□□□ -0.49
PDLIM2-208ENST00000416159 ACTR3CQ9C0K3 210 aaPredicted RBP11.99□□□□□ -0.49
PDLIM2-208ENST00000416159 TAAR5O14804 337 aa11.98□□□□□ -0.49
PDLIM2-208ENST00000416159 EREGO14944 169 aa11.98□□□□□ -0.49
PDLIM2-208ENST00000416159 SUMO1P63165 101 aaKnown RBP11.98□□□□□ -0.49
PDLIM2-208ENST00000416159 Q5BKY6 102 aa11.98□□□□□ -0.49
PDLIM2-208ENST00000416159 SH2D6Q7Z4S9 175 aa11.98□□□□□ -0.49
PDLIM2-208ENST00000416159 INO80EQ8NBZ0 244 aaPredicted RBP11.98□□□□□ -0.49
PDLIM2-208ENST00000416159 KRTAP4-5Q9BYR2 181 aa11.98□□□□□ -0.49
PDLIM2-208ENST00000416159 PSG8Q9UQ74 426 aa11.98□□□□□ -0.49
PDLIM2-208ENST00000416159 LRP1BQ9NZR2 4599 aa11.98□□□□□ -0.49
PDLIM2-208ENST00000416159 EPDR1Q9UM22 224 aa11.97□□□□□ -0.49
PDLIM2-208ENST00000416159 BORCS7-ASMTA0A0B4J1R7 106 aa11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 FBLL1A6NHQ2 334 aaKnown RBP11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 CIDEAO60543 219 aa11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 GATA1P15976 413 aaPredicted RBP11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 EVI2AP22794 236 aa11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 ZNF80P51504 273 aaPredicted RBP11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 ERVFC1-1P60608 527 aa11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 FLI1Q01543 452 aaPredicted RBP11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 SMUG1Q53HV7 270 aa11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 MAPKAPK5-AS1Q8N8E1 139 aa11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 SH3BGRL3Q9H299 93 aa11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 PGPEP1Q9NXJ5 209 aa11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 TNFRSF18Q9Y5U5 241 aa11.96□□□□□ -0.49
PDLIM2-208ENST00000416159 GCGP01275 180 aa11.95□□□□□ -0.5
PDLIM2-208ENST00000416159 PFN1P07737 140 aaKnown RBP11.95□□□□□ -0.5
PDLIM2-208ENST00000416159 ZFP69Q49AA0 526 aa11.95□□□□□ -0.5
PDLIM2-208ENST00000416159 WFDC10BQ8IUB3 73 aa11.95□□□□□ -0.5
PDLIM2-208ENST00000416159 CYB561D1Q8N8Q1 229 aa11.95□□□□□ -0.5
PDLIM2-208ENST00000416159 TMEM75Q8N9X5 138 aa11.95□□□□□ -0.5
PDLIM2-208ENST00000416159 C11orf21Q9P2W6 132 aa11.95□□□□□ -0.5
PDLIM2-208ENST00000416159 LOC100131303A0A0U1RQF7 123 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 A0A1W2PRE2 83 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 GGTLC3B5MD39 225 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 RS1O15537 224 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 IGLV2-11P01706 119 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 DNAH10OSP0CZ25 163 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 TIRAPP58753 221 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 ZNF876PQ49A33 203 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 SAPCD1Q5SSQ6 148 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 RPL7L1Q6DKI1 246 aaKnown RBP11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 PRNTQ86SH4 94 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 PTH2Q96A98 100 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 MSRB1Q9NZV6 116 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 HSPG2P98160 4391 aa11.94□□□□□ -0.5
PDLIM2-208ENST00000416159 FXYD6-FXYD2A0A087WZ82 144 aa11.93□□□□□ -0.5
PDLIM2-208ENST00000416159 RNF222A6NCQ9 220 aa11.93□□□□□ -0.5
PDLIM2-208ENST00000416159 C10orf126Q8N4M7 172 aa11.93□□□□□ -0.5
PDLIM2-208ENST00000416159 NHLRC2Q8NBF2 726 aa11.93□□□□□ -0.5
PDLIM2-208ENST00000416159 C9orf85Q96MD7 179 aa11.93□□□□□ -0.5
PDLIM2-208ENST00000416159 CTXND1A0A1B0GTU2 59 aa11.92□□□□□ -0.5
PDLIM2-208ENST00000416159 CFAP126Q5VTH2 177 aa11.92□□□□□ -0.5
PDLIM2-208ENST00000416159 Q8N1X5 172 aa11.92□□□□□ -0.5
PDLIM2-208ENST00000416159 PRADC1Q9BSG0 188 aa11.92□□□□□ -0.5
PDLIM2-208ENST00000416159 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
PDLIM2-208ENST00000416159 TRBV6-4A0A1B0GX49 114 aa11.91□□□□□ -0.5
PDLIM2-208ENST00000416159 PPT1P50897 306 aa11.91□□□□□ -0.5
PDLIM2-208ENST00000416159 CDPF1Q6NVV7 123 aa11.91□□□□□ -0.5
PDLIM2-208ENST00000416159 SLC25A29Q8N8R3 303 aa11.91□□□□□ -0.5
PDLIM2-208ENST00000416159 OR2T35Q8NGX2 323 aa11.91□□□□□ -0.5
PDLIM2-208ENST00000416159 ABCA13Q86UQ4 5058 aa11.91□□□□□ -0.5
PDLIM2-208ENST00000416159 CRYGDP07320 174 aa11.9□□□□□ -0.5
PDLIM2-208ENST00000416159 RHOHQ15669 191 aa11.9□□□□□ -0.5
PDLIM2-208ENST00000416159 ZNF726P1Q15940 193 aa11.9□□□□□ -0.5
PDLIM2-208ENST00000416159 DPPA3Q6W0C5 159 aa11.9□□□□□ -0.5
PDLIM2-208ENST00000416159 NKX6-2Q9C056 277 aaPredicted RBP11.9□□□□□ -0.5
PDLIM2-208ENST00000416159 A0A087WTM6 91 aa11.89□□□□□ -0.51
PDLIM2-208ENST00000416159 TRAV34A0A0B4J273 112 aa11.89□□□□□ -0.51
PDLIM2-208ENST00000416159 IGHV3-38A0A0C4DH36 116 aa11.89□□□□□ -0.51
PDLIM2-208ENST00000416159 PGPEP1LA6NFU8 196 aa11.89□□□□□ -0.51
PDLIM2-208ENST00000416159 FABP5P3A8MUU1 101 aa11.89□□□□□ -0.51
PDLIM2-208ENST00000416159 IFNA7P01567 189 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms