RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 COX6B1P14854 86 aa6.16□□□□□ -1.42
SIK3-203ENST00000415541 GOLT1AQ6ZVE7 132 aa6.16□□□□□ -1.42
SIK3-203ENST00000415541 MAPKAPK5-AS1Q8N8E1 139 aa6.16□□□□□ -1.42
SIK3-203ENST00000415541 RASL10AQ92737 203 aa6.16□□□□□ -1.42
SIK3-203ENST00000415541 SLC25A39Q9BZJ4 359 aaPredicted RBP6.16□□□□□ -1.42
SIK3-203ENST00000415541 RPUSD1Q9UJJ7 312 aaKnown RBP6.16□□□□□ -1.42
SIK3-203ENST00000415541 DUSP14O95147 198 aaKnown RBP6.16□□□□□ -1.42
SIK3-203ENST00000415541 UBE2D3P61077 147 aa6.16□□□□□ -1.42
SIK3-203ENST00000415541 UBE2D2P62837 147 aa6.16□□□□□ -1.42
SIK3-203ENST00000415541 ZFP2Q6ZN57 461 aa6.16□□□□□ -1.42
SIK3-203ENST00000415541 PCSK5Q92824 1860 aa6.16□□□□□ -1.42
SIK3-203ENST00000415541 NPFFO15130 113 aa6.15□□□□□ -1.42
SIK3-203ENST00000415541 LINC00694P0DN24 101 aa6.15□□□□□ -1.42
SIK3-203ENST00000415541 TMEM101Q96IK0 257 aa6.15□□□□□ -1.42
SIK3-203ENST00000415541 ARHGAP32A7KAX9 2087 aa6.15□□□□□ -1.42
SIK3-203ENST00000415541 TANC2Q9HCD6 1990 aa6.15□□□□□ -1.42
SIK3-203ENST00000415541 UPK2O00526 184 aa6.15□□□□□ -1.42
SIK3-203ENST00000415541 TCL1BO95988 128 aa6.15□□□□□ -1.42
SIK3-203ENST00000415541 NPIPB3Q92617 1050 aa6.15□□□□□ -1.42
SIK3-203ENST00000415541 TRBV6-1A0A0K0K1D8 114 aa6.15□□□□□ -1.43
SIK3-203ENST00000415541 TMEM155Q4W5P6 130 aa6.15□□□□□ -1.43
SIK3-203ENST00000415541 OR4C13Q8NGP0 309 aa6.15□□□□□ -1.43
SIK3-203ENST00000415541 CCL19Q99731 98 aa6.15□□□□□ -1.43
SIK3-203ENST00000415541 PRADC1Q9BSG0 188 aa6.15□□□□□ -1.43
SIK3-203ENST00000415541 MRPL35Q9NZE8 188 aaKnown RBP6.15□□□□□ -1.43
SIK3-203ENST00000415541 DMXL2Q8TDJ6 3036 aa6.14□□□□□ -1.43
SIK3-203ENST00000415541 A0A1B0GX51 115 aa6.14□□□□□ -1.43
SIK3-203ENST00000415541 NDUFA3O95167 84 aa6.14□□□□□ -1.43
SIK3-203ENST00000415541 RNASE2P10153 161 aaKnown RBP6.14□□□□□ -1.43
SIK3-203ENST00000415541 ADORA2A-AS1P86434 159 aa6.14□□□□□ -1.43
SIK3-203ENST00000415541 LYZL1Q6UWQ5 148 aa6.14□□□□□ -1.43
SIK3-203ENST00000415541 C21orf62Q9NYP8 219 aa6.14□□□□□ -1.43
SIK3-203ENST00000415541 MAP1AP78559 2803 aaPredicted RBP6.14□□□□□ -1.43
SIK3-203ENST00000415541 RPL27AP46776 148 aaKnown RBP6.14□□□□□ -1.43
SIK3-203ENST00000415541 HCFC1P51610 2035 aa6.14□□□□□ -1.43
SIK3-203ENST00000415541 CRLF1O75462 422 aa6.14□□□□□ -1.43
SIK3-203ENST00000415541 NDUFA7O95182 113 aa6.14□□□□□ -1.43
SIK3-203ENST00000415541 RPL13AP40429 203 aaKnown RBP6.14□□□□□ -1.43
SIK3-203ENST00000415541 MLANAQ16655 118 aa6.14□□□□□ -1.43
SIK3-203ENST00000415541 C10orf55Q5SWW7 151 aa6.14□□□□□ -1.43
SIK3-203ENST00000415541 FAM19A5Q7Z5A7 132 aaPredicted RBP6.14□□□□□ -1.43
SIK3-203ENST00000415541 H7C1H1 209 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 LGALS1P09382 135 aaKnown RBP6.13□□□□□ -1.43
SIK3-203ENST00000415541 PATE2Q6UY27 113 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 NTN5Q8WTR8 489 aaPredicted RBP6.13□□□□□ -1.43
SIK3-203ENST00000415541 ZNF815PA8K554 130 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 RPL7P18124 248 aaKnown RBP6.13□□□□□ -1.43
SIK3-203ENST00000415541 GATA4P43694 442 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 ZNF134P52741 427 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 LINC01587Q99440 93 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 IGKV1-16P04430 117 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 SAA1P0DJI8 122 aaPredicted RBP6.13□□□□□ -1.43
SIK3-203ENST00000415541 HLA-DMBP28068 263 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 UBE2D1P51668 147 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 Q8N1Y9 231 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 C3orf56Q8N813 242 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 CHCHD5Q9BSY4 110 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 S4R3C0 116 aa6.13□□□□□ -1.43
SIK3-203ENST00000415541 UQCRQO14949 82 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 RPS28P62857 69 aaKnown RBP6.12□□□□□ -1.43
SIK3-203ENST00000415541 ATXN8Q156A1 80 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 ECSCRQ19T08 205 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 C3orf36Q3SXR2 165 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 Q6ZQT7 251 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 C3orf22Q8N5N4 141 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 DPM3Q9P2X0 92 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 WNK1Q9H4A3 2382 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 IGHV3-35A0A0C4DH35 117 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 SMKR1H3BMG3 65 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 H3BMM0 161 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 DYSFO75923 2080 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 IGHV1-8P0DP01 117 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 HERVK_113P61574 105 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 PAX8Q06710 450 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 ZNF56Q15929 161 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 TMEM219Q86XT9 240 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 TMEM75Q8N9X5 138 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 UBE2WQ96B02 151 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 C17orf58Q2M2W7 97 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 KHDC1LQ5JSQ8 128 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 MRAPQ8TCY5 172 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 PRO1854Q9UHT4 67 aa6.12□□□□□ -1.43
SIK3-203ENST00000415541 ZNF256Q9Y2P7 627 aaPredicted RBP6.12□□□□□ -1.43
SIK3-203ENST00000415541 AGRNO00468 2067 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 DSCAMO60469 2012 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 F8VRH5 84 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 C15orf65H3BRN8 121 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 H3BTX0 84 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 LYZP61626 148 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 RPL11P62913 178 aaKnown RBP6.11□□□□□ -1.43
SIK3-203ENST00000415541 HERVK_113P63121 156 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 LY6EQ16553 131 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 NDUFA11Q86Y39 141 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 Q8N8P6 123 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 THAP8Q8NA92 274 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 BPESC1Q9GZL8 116 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 COL27A1Q8IZC6 1860 aaPredicted RBP6.11□□□□□ -1.43
SIK3-203ENST00000415541 F5H768 121 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 PROP1O75360 226 aa6.11□□□□□ -1.43
SIK3-203ENST00000415541 ATP5G1P05496 136 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms