RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 Q6ZTC4 211 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 SSX7Q7RTT5 188 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 RPP25LQ8N5L8 163 aaKnown RBP3.48□□□□□ -1.85
VPS41-205ENST00000414632 OR10G4Q8NGN3 311 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 OR10G9Q8NGN4 311 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 OR10G7Q8NGN6 311 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 OR10J6PQ8NGY7 276 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 Q8TAT8 98 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 HYLS1Q96M11 299 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 IGF2BP2-AS1Q96M15 143 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 RNF24Q9Y225 148 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 GOLT1BQ9Y3E0 138 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 TRAV12-3A0A0B4J271 114 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 A0A1W2PPV4 95 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 NUPR2A6NF83 97 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 SMIM1B2RUZ4 78 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 HBE1P02100 147 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 ARL14EPLP0DKL9 152 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 HTN3P15516 51 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 AZU1P20160 251 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 M6PRP20645 277 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 CDKN1BP46527 198 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 CDC34P49427 236 aaPredicted RBP3.47□□□□□ -1.85
VPS41-205ENST00000414632 GNG5P63218 68 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 BTN1A1Q13410 526 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 RRN3P1Q2M238 152 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 C12orf74Q32Q52 190 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 PRR9Q5T870 116 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 GFI1BQ5VTD9 330 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 CEMP1Q6PRD7 247 aaPredicted RBP3.47□□□□□ -1.85
VPS41-205ENST00000414632 Q6ZQT7 251 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 OR2G3Q8NGZ4 309 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 ASB13Q8WXK3 278 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 C2orf48Q96LS8 159 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 LINC01587Q99440 93 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 VGLL1Q99990 258 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 AGPAT4-IT1Q9H0P7 198 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 Q9H3A6 140 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 PRELID1Q9Y255 219 aa3.47□□□□□ -1.85
VPS41-205ENST00000414632 YTHDF2Q9Y5A9 579 aaKnown RBP3.47□□□□□ -1.85
VPS41-205ENST00000414632 DNAH10Q8IVF4 4471 aa3.46□□□□□ -1.85
VPS41-205ENST00000414632 DNAH6Q9C0G6 4158 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 BORCS7-ASMTA0A0B4J1R7 106 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 LCE6AA0A183 80 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 A0A1B0GV50 99 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 IGLL5B9A064 214 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 ZNF253O75346 499 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 AMBPP02760 352 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 RNASE4P34096 147 aaKnown RBP3.46□□□□□ -1.86
VPS41-205ENST00000414632 FGF8P55075 233 aaPredicted RBP3.46□□□□□ -1.86
VPS41-205ENST00000414632 XGP55808 180 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 TAS2R45P59539 299 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 PDE6HQ13956 83 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 ZNF726P1Q15940 193 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 TMEM78Q5T7P6 136 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 FAM222AQ5U5X8 452 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 PSMG3Q9BT73 122 aaPredicted RBP3.46□□□□□ -1.86
VPS41-205ENST00000414632 TPPP3Q9BW30 176 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 CYTL1Q9NRR1 136 aa3.46□□□□□ -1.86
VPS41-205ENST00000414632 KMT2AQ03164 3969 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 DEFB131BA0A096LNP1 70 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 TRAV8-1A0A0A6YYK1 113 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 TRAV10A0A0B4J240 114 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 A0A1B0GUV1 79 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 KANTRA0A1W2PQU2 76 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 PGPA6NDG6 321 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 SMIM9A6NGZ8 99 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 LY6G6CO95867 125 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 SLC25A5P05141 298 aaKnown RBP3.45□□□□□ -1.86
VPS41-205ENST00000414632 GPX1P07203 203 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 PRSS1P07477 247 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 STAG3L2P0CL84 134 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 STAG3L3P0CL85 134 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 SPART-AS1P0CW21 52 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 DEFB130BP0DP73 79 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 DEFB130AP0DP74 79 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 GCHFRP30047 84 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 TSPOP30536 169 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 LEPP41159 167 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 CSN1S1P47710 185 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 FHITP49789 147 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 UBE2G2P60604 165 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 SERF2P84101 59 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 GOLT1AQ6ZVE7 132 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 Q6ZVQ6 151 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 TMUB2Q71RG4 321 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 KCNRGQ8N5I3 272 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 OR10G8Q8NGN5 311 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 GNPNAT1Q96EK6 184 aaPredicted RBP3.45□□□□□ -1.86
VPS41-205ENST00000414632 NIPSNAP3BQ9BS92 247 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 ZNF471Q9BX82 626 aaPredicted RBP3.45□□□□□ -1.86
VPS41-205ENST00000414632 ACTR3CQ9C0K3 210 aaPredicted RBP3.45□□□□□ -1.86
VPS41-205ENST00000414632 ZNF492Q9P255 531 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 KLK5Q9Y337 293 aaPredicted RBP3.45□□□□□ -1.86
VPS41-205ENST00000414632 DNAH2Q9P225 4427 aa3.45□□□□□ -1.86
VPS41-205ENST00000414632 FRAS1Q86XX4 4008 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 IGHV4-4A0A075B6R2 117 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 CTXND1A0A1B0GTU2 59 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 PLAC8L1A1L4L8 177 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 C7orf71A4D174 169 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms