RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 MAP1LC3B2A6NCE7 125 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 PGPA6NDG6 321 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 ZNF705GA8MUZ8 300 aaPredicted RBP5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 C16orf90A8MZG2 172 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 H7BYZ3 331 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 SLC25A5P05141 298 aaKnown RBP5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 SPART-AS1P0CW21 52 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 TPT1P13693 172 aaKnown RBP5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 FGF8P55075 233 aaPredicted RBP5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 GNG5P63218 68 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 GOLT1AQ6ZVE7 132 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 SSX7Q7RTT5 188 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 C9orf62Q8N4C0 152 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 MAPKAPK5-AS1Q8N8E1 139 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 NHLRC2Q8NBF2 726 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 LINC00477Q96M19 166 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 VGLL1Q99990 258 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 NIPSNAP3BQ9BS92 247 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 MAP1LC3BQ9GZQ8 125 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 AGPAT4-IT1Q9H0P7 198 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 TMEM167BQ9NRX6 74 aa5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 YTHDF2Q9Y5A9 579 aaKnown RBP5.84□□□□□ -1.47
UPF3AP1-201ENST00000413731 APOBP04114 4563 aaKnown RBP5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 TRAV12-3A0A0B4J271 114 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 C7orf71A4D174 169 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 RBAKDNA6NC62 111 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 CDK2AP2O75956 126 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 GPX1P07203 203 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 ZNF138P52744 262 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 TAS2R60P59551 318 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 BTN1A1Q13410 526 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 ZNF726P1Q15940 193 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 SOHLH1Q5JUK2 328 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 C1orf134Q5TEV5 83 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 FAM222AQ5U5X8 452 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 C9orf47Q6ZRZ4 202 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 C5orf17Q8NAS9 161 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 STOML3Q8TAV4 291 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 FAM213BQ8TBF2 198 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 C16orf74Q96GX8 76 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 C20orf144Q9BQM9 153 aa5.83□□□□□ -1.48
UPF3AP1-201ENST00000413731 A0A1B0GV50 99 aa5.82□□□□□ -1.48
UPF3AP1-201ENST00000413731 GGTLC3B5MD39 225 aa5.82□□□□□ -1.48
UPF3AP1-201ENST00000413731 UMAD1C9J7I0 102 aa5.82□□□□□ -1.48
UPF3AP1-201ENST00000413731 K7EQM0 130 aa5.82□□□□□ -1.48
UPF3AP1-201ENST00000413731 PRM2P04554 102 aa5.82□□□□□ -1.48
UPF3AP1-201ENST00000413731 SEC11BP0C7V7 166 aa5.82□□□□□ -1.48
UPF3AP1-201ENST00000413731 RNASE4P34096 147 aaKnown RBP5.82□□□□□ -1.48
UPF3AP1-201ENST00000413731 UBE2G2P60604 165 aa5.82□□□□□ -1.48
UPF3AP1-201ENST00000413731 TMEM263Q8WUH6 116 aaKnown RBP5.82□□□□□ -1.48
UPF3AP1-201ENST00000413731 TMED6Q8WW62 240 aa5.82□□□□□ -1.48
UPF3AP1-201ENST00000413731 ZNF492Q9P255 531 aa5.82□□□□□ -1.48
UPF3AP1-201ENST00000413731 HERC1Q15751 4861 aa5.82□□□□□ -1.48
UPF3AP1-201ENST00000413731 TRAV8-1A0A0A6YYK1 113 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 SERTM2A0A1B0GWG4 89 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 KLLNB2CW77 178 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 IFNA7P01567 189 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 TCRAP04437 139 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 HTN3P15516 51 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 CRISP2P16562 243 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 FHITP49789 147 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 DAD1P61803 113 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 SNRPEP62304 92 aaKnown RBP5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 PRR9Q5T870 116 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 EIF5AL1Q6IS14 154 aaKnown RBP5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 ZFAND2AQ8N6M9 145 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 FAM19A4Q96LR4 140 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 PYGO2Q9BRQ0 406 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 NDFIP1Q9BT67 221 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 TMPRSS5Q9H3S3 457 aa5.81□□□□□ -1.48
UPF3AP1-201ENST00000413731 TRBV7-9A0A0J9YWB2 115 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 A0A1W2PRE2 83 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 LYRM9A8MSI8 78 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 SNURFLB1AK76 121 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 F6UZH7 168 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 NMBP08949 121 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 DEFB130BP0DP73 79 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 DEFB130AP0DP74 79 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 AZU1P20160 251 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 DPPA3Q6W0C5 159 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 ZNF493Q6ZR52 646 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 SLC51BQ86UW2 128 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 CYB561D1Q8N8Q1 229 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 ZNF680Q8NEM1 530 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 SUN5Q8TC36 379 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 RNASE8Q8TDE3 154 aaKnown RBP5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 SFT2D1Q8WV19 159 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 FAM210BQ96KR6 192 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 SGK494Q96LW2 274 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 ATG101Q9BSB4 218 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 NAGKQ9UJ70 344 aa5.8□□□□□ -1.48
UPF3AP1-201ENST00000413731 FAM74A7A6NL05 159 aa5.79□□□□□ -1.48
UPF3AP1-201ENST00000413731 PEX7O00628 323 aa5.79□□□□□ -1.48
UPF3AP1-201ENST00000413731 PPT1P50897 306 aa5.79□□□□□ -1.48
UPF3AP1-201ENST00000413731 RNF212Q495C1 297 aa5.79□□□□□ -1.48
UPF3AP1-201ENST00000413731 Q8N1X5 172 aa5.79□□□□□ -1.48
UPF3AP1-201ENST00000413731 EIF4E3Q8N5X7 224 aaKnown RBP5.79□□□□□ -1.48
UPF3AP1-201ENST00000413731 ARL6IP6Q8N6S5 226 aa5.79□□□□□ -1.48
UPF3AP1-201ENST00000413731 TREM1Q9NP99 234 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms