RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 PCNX1Q96RV3 2341 aa19.6■□□□□ 0.73
SPIRE1-202ENST00000409402 SPART-AS1P0CW21 52 aa19.6■□□□□ 0.73
SPIRE1-202ENST00000409402 GAGE2EQ4V326 116 aa19.6■□□□□ 0.73
SPIRE1-202ENST00000409402 GAGE2DQ9UEU5 116 aa19.6■□□□□ 0.73
SPIRE1-202ENST00000409402 IGLV11-55A0A075B6I3 123 aa19.59■□□□□ 0.73
SPIRE1-202ENST00000409402 NDUFA12Q9UI09 145 aa19.59■□□□□ 0.73
SPIRE1-202ENST00000409402 MUC6Q6W4X9 2439 aa19.59■□□□□ 0.73
SPIRE1-202ENST00000409402 NPYP01303 97 aa19.59■□□□□ 0.73
SPIRE1-202ENST00000409402 GTF3C1Q12789 2109 aa19.59■□□□□ 0.73
SPIRE1-202ENST00000409402 Q8N9W7 124 aa19.59■□□□□ 0.73
SPIRE1-202ENST00000409402 I3L2K1 104 aa19.58■□□□□ 0.73
SPIRE1-202ENST00000409402 Q8NA96 180 aa19.58■□□□□ 0.73
SPIRE1-202ENST00000409402 SIGLEC8Q9NYZ4 499 aa19.58■□□□□ 0.72
SPIRE1-202ENST00000409402 IGLV2-23P01705 113 aa19.58■□□□□ 0.72
SPIRE1-202ENST00000409402 ZFP36P26651 326 aaKnown RBP19.58■□□□□ 0.72
SPIRE1-202ENST00000409402 MYCNOSP40205 109 aa19.57■□□□□ 0.72
SPIRE1-202ENST00000409402 RITA1Q96K30 269 aa19.57■□□□□ 0.72
SPIRE1-202ENST00000409402 ZGRF1Q86YA3 2104 aa19.57■□□□□ 0.72
SPIRE1-202ENST00000409402 CFHR4Q92496 578 aa19.57■□□□□ 0.72
SPIRE1-202ENST00000409402 ZNF48Q96MX3 618 aaPredicted RBP19.57■□□□□ 0.72
SPIRE1-202ENST00000409402 IGHV4OR15-8A0A075B7B6 117 aa19.57■□□□□ 0.72
SPIRE1-202ENST00000409402 A0A087WW49 117 aa19.57■□□□□ 0.72
SPIRE1-202ENST00000409402 ATP5G1P05496 136 aa19.56■□□□□ 0.72
SPIRE1-202ENST00000409402 PKIGQ9Y2B9 76 aa19.56■□□□□ 0.72
SPIRE1-202ENST00000409402 K7EIM0 57 aa19.56■□□□□ 0.72
SPIRE1-202ENST00000409402 ZNF493Q6ZR52 646 aa19.56■□□□□ 0.72
SPIRE1-202ENST00000409402 ICOSQ9Y6W8 199 aa19.56■□□□□ 0.72
SPIRE1-202ENST00000409402 CLPSL1A2RUU4 121 aa19.56■□□□□ 0.72
SPIRE1-202ENST00000409402 PCP4P48539 62 aa19.55■□□□□ 0.72
SPIRE1-202ENST00000409402 CCL18P55774 89 aa19.55■□□□□ 0.72
SPIRE1-202ENST00000409402 Q6ZSR3 168 aa19.55■□□□□ 0.72
SPIRE1-202ENST00000409402 Q9HAA7 133 aa19.55■□□□□ 0.72
SPIRE1-202ENST00000409402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.55■□□□□ 0.722e-6■■■■■ 30
SPIRE1-202ENST00000409402 GAGE2AQ6NT46 116 aa19.55■□□□□ 0.72
SPIRE1-202ENST00000409402 Q6ZQT7 251 aa19.55■□□□□ 0.72
SPIRE1-202ENST00000409402 SIGMAR1Q99720 223 aa19.55■□□□□ 0.72
SPIRE1-202ENST00000409402 MALRD1Q5VYJ5 2156 aa19.54■□□□□ 0.72
SPIRE1-202ENST00000409402 MRPL23Q16540 153 aaKnown RBP19.54■□□□□ 0.72
SPIRE1-202ENST00000409402 DOCK9Q9BZ29 2069 aa19.54■□□□□ 0.72
SPIRE1-202ENST00000409402 C1orf43Q9BWL3 253 aa19.54■□□□□ 0.72
SPIRE1-202ENST00000409402 H3BMM0 161 aa19.54■□□□□ 0.72
SPIRE1-202ENST00000409402 XCL1P47992 114 aa19.54■□□□□ 0.72
SPIRE1-202ENST00000409402 DOCK10Q96BY6 2186 aa19.53■□□□□ 0.72
SPIRE1-202ENST00000409402 EGR2P11161 476 aaPredicted RBP19.53■□□□□ 0.72
SPIRE1-202ENST00000409402 CTSGP08311 255 aa19.53■□□□□ 0.72
SPIRE1-202ENST00000409402 SH2D6Q7Z4S9 175 aa19.53■□□□□ 0.72
SPIRE1-202ENST00000409402 ANAPC13Q9BS18 74 aa19.53■□□□□ 0.72
SPIRE1-202ENST00000409402 SCRT2Q9NQ03 307 aa19.53■□□□□ 0.72
SPIRE1-202ENST00000409402 C9JAW5 83 aa19.53■□□□□ 0.72
SPIRE1-202ENST00000409402 UBE2BP63146 152 aa19.53■□□□□ 0.72
SPIRE1-202ENST00000409402 C16orf54Q6UWD8 224 aa19.53■□□□□ 0.72
SPIRE1-202ENST00000409402 SPINK8P0C7L1 97 aa19.52■□□□□ 0.72
SPIRE1-202ENST00000409402 UBE2WQ96B02 151 aa19.52■□□□□ 0.72
SPIRE1-202ENST00000409402 TMEM89A2RUT3 159 aa19.52■□□□□ 0.72
SPIRE1-202ENST00000409402 RNASE13Q5GAN3 156 aaKnown RBP19.51■□□□□ 0.71
SPIRE1-202ENST00000409402 Q8N7P7 452 aa19.51■□□□□ 0.71
SPIRE1-202ENST00000409402 C4orf3Q8WVX3 66 aa19.51■□□□□ 0.71
SPIRE1-202ENST00000409402 PYY3Q5JQD4 70 aa19.51■□□□□ 0.71
SPIRE1-202ENST00000409402 GAGE2BQ13066 116 aa19.5■□□□□ 0.71
SPIRE1-202ENST00000409402 LGALS9BQ3B8N2 356 aa19.5■□□□□ 0.71
SPIRE1-202ENST00000409402 LGALS9CQ6DKI2 356 aa19.5■□□□□ 0.71
SPIRE1-202ENST00000409402 C2orf70A6NJV1 201 aa19.5■□□□□ 0.71
SPIRE1-202ENST00000409402 CD5LO43866 347 aa19.5■□□□□ 0.71
SPIRE1-202ENST00000409402 GYPEP15421 78 aa19.5■□□□□ 0.71
SPIRE1-202ENST00000409402 KIF26AQ9ULI4 1882 aaPredicted RBP19.5■□□□□ 0.71
SPIRE1-202ENST00000409402 F8VRH5 84 aa19.49■□□□□ 0.71
SPIRE1-202ENST00000409402 MRPL35Q9NZE8 188 aaKnown RBP19.49■□□□□ 0.71
SPIRE1-202ENST00000409402 TRAV25A0A0B4J276 109 aa19.49■□□□□ 0.71
SPIRE1-202ENST00000409402 SOCS3O14543 225 aa19.49■□□□□ 0.71
SPIRE1-202ENST00000409402 OCIAD2Q56VL3 154 aa19.49■□□□□ 0.71
SPIRE1-202ENST00000409402 SIRPDQ9H106 197 aa19.49■□□□□ 0.71
SPIRE1-202ENST00000409402 ASPHD1Q5U4P2 390 aa19.49■□□□□ 0.71
SPIRE1-202ENST00000409402 TAL2Q16559 108 aa19.48■□□□□ 0.71
SPIRE1-202ENST00000409402 LRRC75A-AS1Q8N1F1 130 aa19.48■□□□□ 0.71
SPIRE1-202ENST00000409402 EDA2RQ9HAV5 297 aa19.48■□□□□ 0.71
SPIRE1-202ENST00000409402 LOXL1Q08397 574 aaPredicted RBP19.48■□□□□ 0.71
SPIRE1-202ENST00000409402 ADAMTSL5Q6ZMM2 481 aa19.48■□□□□ 0.71
SPIRE1-202ENST00000409402 K7EMT4 169 aa19.48■□□□□ 0.71
SPIRE1-202ENST00000409402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP19.47■□□□□ 0.71
SPIRE1-202ENST00000409402 IGKV2-29A2NJV5 120 aaPredicted RBP19.47■□□□□ 0.71
SPIRE1-202ENST00000409402 K7EQD1 137 aa19.47■□□□□ 0.71
SPIRE1-202ENST00000409402 ATP6V0E2Q8NHE4 81 aa19.47■□□□□ 0.71
SPIRE1-202ENST00000409402 RBMY1FQ15415 496 aaKnown RBP19.47■□□□□ 0.71
SPIRE1-202ENST00000409402 IGKV1-17P01599 117 aa19.47■□□□□ 0.71
SPIRE1-202ENST00000409402 TRAV13-2A0A0B4J235 113 aa19.47■□□□□ 0.71
SPIRE1-202ENST00000409402 K7EMI3 77 aa19.46■□□□□ 0.71
SPIRE1-202ENST00000409402 IGHG2P01859 326 aa19.46■□□□□ 0.71
SPIRE1-202ENST00000409402 MRPL52Q86TS9 123 aaKnown RBP19.46■□□□□ 0.71
SPIRE1-202ENST00000409402 BUB3O43684 328 aa19.46■□□□□ 0.71
SPIRE1-202ENST00000409402 IGLV1-47P01700 117 aa19.46■□□□□ 0.71
SPIRE1-202ENST00000409402 PRO3102Q9H379 93 aa19.45■□□□□ 0.7
SPIRE1-202ENST00000409402 TECTAO75443 2155 aa19.45■□□□□ 0.7
SPIRE1-202ENST00000409402 IL15RAQ13261 267 aa19.45■□□□□ 0.7
SPIRE1-202ENST00000409402 J3QQQ9 107 aa19.45■□□□□ 0.7
SPIRE1-202ENST00000409402 GPHB5Q86YW7 130 aa19.45■□□□□ 0.7
SPIRE1-202ENST00000409402 DENND4CQ5VZ89 1909 aa19.44■□□□□ 0.7
SPIRE1-202ENST00000409402 NDUFS6O75380 124 aaKnown RBP19.44■□□□□ 0.7
SPIRE1-202ENST00000409402 INAFM2P0DMQ5 153 aa19.44■□□□□ 0.7
SPIRE1-202ENST00000409402 ZNF664Q8N3J9 261 aa19.44■□□□□ 0.7
SPIRE1-202ENST00000409402 SMAD5-AS1Q9Y6J3 95 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms