RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 A0A0G2JRQ6 117 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 SHISA9B4DS77 424 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 C4orf48Q5BLP8 95 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 PRR25Q96S07 402 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 IGKV1OR2-108A0A075B7D4 117 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 A8MWP6 167 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 PRR30Q53SZ7 412 aaPredicted RBP9.61□□□□□ -0.87
SMCR8-201ENST00000406438 Q6ZRM9 215 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 Q9HAA7 133 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 NOP10Q9NPE3 64 aaKnown RBP9.61□□□□□ -0.87
SMCR8-201ENST00000406438 CCL24O00175 119 aa9.61□□□□□ -0.87
SMCR8-201ENST00000406438 PRSS57Q6UWY2 283 aa9.6□□□□□ -0.87
SMCR8-201ENST00000406438 REG4Q9BYZ8 158 aa9.6□□□□□ -0.87
SMCR8-201ENST00000406438 ZNF581Q9P0T4 197 aa9.6□□□□□ -0.87
SMCR8-201ENST00000406438 IGHV7-4-1A0A0J9YVY3 117 aa9.6□□□□□ -0.87
SMCR8-201ENST00000406438 BOD1L2Q8IYS8 172 aa9.6□□□□□ -0.87
SMCR8-201ENST00000406438 H3BRN7 92 aa9.6□□□□□ -0.87
SMCR8-201ENST00000406438 FUSP35637 526 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMCR8-201ENST00000406438 BVES-AS1Q5T3Y7 98 aa9.6□□□□□ -0.87
SMCR8-201ENST00000406438 CYYR1Q96J86 154 aa9.6□□□□□ -0.87
SMCR8-201ENST00000406438 TMEM258P61165 79 aa9.59□□□□□ -0.87
SMCR8-201ENST00000406438 HIVEP2P31629 2446 aa9.59□□□□□ -0.87
SMCR8-201ENST00000406438 PYY3Q5JQD4 70 aa9.59□□□□□ -0.87
SMCR8-201ENST00000406438 K7EMI3 77 aa9.59□□□□□ -0.87
SMCR8-201ENST00000406438 C17orf58Q2M2W7 97 aa9.59□□□□□ -0.87
SMCR8-201ENST00000406438 FOXI2Q6ZQN5 318 aa9.59□□□□□ -0.87
SMCR8-201ENST00000406438 ZNF503Q96F45 646 aa9.59□□□□□ -0.87
SMCR8-201ENST00000406438 C1orf43Q9BWL3 253 aa9.59□□□□□ -0.87
SMCR8-201ENST00000406438 COX8AP10176 69 aa9.59□□□□□ -0.88
SMCR8-201ENST00000406438 C20orf78Q9BR46 151 aa9.59□□□□□ -0.88
SMCR8-201ENST00000406438 LGALS9BQ3B8N2 356 aa9.58□□□□□ -0.88
SMCR8-201ENST00000406438 LGALS9CQ6DKI2 356 aa9.58□□□□□ -0.88
SMCR8-201ENST00000406438 FOXL2NBQ6ZUU3 175 aa9.58□□□□□ -0.88
SMCR8-201ENST00000406438 BDP1A6H8Y1 2624 aa9.58□□□□□ -0.88
SMCR8-201ENST00000406438 ANKRD29Q8N6D5 301 aa9.58□□□□□ -0.88
SMCR8-201ENST00000406438 SIGLEC8Q9NYZ4 499 aa9.58□□□□□ -0.88
SMCR8-201ENST00000406438 VOPP1Q96AW1 172 aa9.58□□□□□ -0.88
SMCR8-201ENST00000406438 PYGO2Q9BRQ0 406 aa9.58□□□□□ -0.88
SMCR8-201ENST00000406438 IGFL3Q6UXB1 125 aa9.58□□□□□ -0.88
SMCR8-201ENST00000406438 CRYGCP07315 174 aa9.58□□□□□ -0.88
SMCR8-201ENST00000406438 CRIPAKQ8N1N5 446 aa9.58□□□□□ -0.88
SMCR8-201ENST00000406438 WDR87Q6ZQQ6 2873 aa9.58□□□□□ -0.88
SMCR8-201ENST00000406438 ZC2HC1AQ96GY0 325 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 H3BUA1 57 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 LINC00311Q8N616 119 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 CARD19Q96LW7 228 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 ORMDL1Q9P0S3 153 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 VPREB3Q9UKI3 123 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 TINCRA0A1B0GVN0 87 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 RNF144BQ7Z419 303 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 LRP4O75096 1905 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 J3QQQ9 107 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 ELANEP08246 267 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 C9orf66Q5T8R8 295 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 ETDCA0A1B0GVM5 59 aa9.57□□□□□ -0.88
SMCR8-201ENST00000406438 RNASE13Q5GAN3 156 aaKnown RBP9.57□□□□□ -0.88
SMCR8-201ENST00000406438 SLX1AQ9BQ83 275 aa9.56□□□□□ -0.88
SMCR8-201ENST00000406438 POLR3KQ9Y2Y1 108 aaPredicted RBP9.56□□□□□ -0.88
SMCR8-201ENST00000406438 SLC25A29Q8N8R3 303 aa9.56□□□□□ -0.88
SMCR8-201ENST00000406438 ADAMTS20P59510 1910 aa9.56□□□□□ -0.88
SMCR8-201ENST00000406438 A0A1W2PPM0 123 aa9.56□□□□□ -0.88
SMCR8-201ENST00000406438 SPANXCQ9NY87 97 aa9.56□□□□□ -0.88
SMCR8-201ENST00000406438 A0A1B0GUS0 222 aa9.56□□□□□ -0.88
SMCR8-201ENST00000406438 H3BQ85 93 aa9.56□□□□□ -0.88
SMCR8-201ENST00000406438 CCL18P55774 89 aa9.56□□□□□ -0.88
SMCR8-201ENST00000406438 RBM3P98179 157 aaKnown RBP9.56□□□□□ -0.88
SMCR8-201ENST00000406438 MRPL35Q9NZE8 188 aaKnown RBP9.56□□□□□ -0.88
SMCR8-201ENST00000406438 NDUFS6O75380 124 aaKnown RBP9.56□□□□□ -0.88
SMCR8-201ENST00000406438 HOXB4P17483 251 aaPredicted RBP9.56□□□□□ -0.88
SMCR8-201ENST00000406438 SH2D6Q7Z4S9 175 aa9.56□□□□□ -0.88
SMCR8-201ENST00000406438 GPR179Q6PRD1 2367 aa9.55□□□□□ -0.88
SMCR8-201ENST00000406438 HERV-K104P63124 156 aa9.55□□□□□ -0.88
SMCR8-201ENST00000406438 TIRAPP58753 221 aa9.55□□□□□ -0.88
SMCR8-201ENST00000406438 RNF152Q8N8N0 203 aa9.55□□□□□ -0.88
SMCR8-201ENST00000406438 C5orf47Q569G3 176 aa9.55□□□□□ -0.88
SMCR8-201ENST00000406438 A0A0J9YY99 117 aa9.55□□□□□ -0.88
SMCR8-201ENST00000406438 DAZ2Q13117 558 aaKnown RBP9.55□□□□□ -0.88
SMCR8-201ENST00000406438 DAZ4Q86SG3 579 aaKnown RBP9.55□□□□□ -0.88
SMCR8-201ENST00000406438 KLHDC3Q9BQ90 382 aa9.55□□□□□ -0.88
SMCR8-201ENST00000406438 DAZ3Q9NR90 486 aaKnown RBP9.55□□□□□ -0.88
SMCR8-201ENST00000406438 U3KQE9 123 aa9.55□□□□□ -0.88
SMCR8-201ENST00000406438 V9GYV3 84 aa9.55□□□□□ -0.88
SMCR8-201ENST00000406438 Q6ZQT7 251 aa9.54□□□□□ -0.88
SMCR8-201ENST00000406438 ZNF493Q6ZR52 646 aa9.54□□□□□ -0.88
SMCR8-201ENST00000406438 FAM231DQ6ZW35 169 aa9.54□□□□□ -0.88
SMCR8-201ENST00000406438 NDUFB1O75438 58 aa9.54□□□□□ -0.88
SMCR8-201ENST00000406438 IGLV3-9A0A075B6K5 115 aa9.54□□□□□ -0.88
SMCR8-201ENST00000406438 RBAKDNA6NC62 111 aa9.54□□□□□ -0.88
SMCR8-201ENST00000406438 FXYD5Q96DB9 178 aa9.54□□□□□ -0.88
SMCR8-201ENST00000406438 IGKV1-6A0A0C4DH72 117 aa9.53□□□□□ -0.88
SMCR8-201ENST00000406438 C20orf144Q9BQM9 153 aa9.53□□□□□ -0.88
SMCR8-201ENST00000406438 LINC01545Q5VT33 79 aa9.53□□□□□ -0.88
SMCR8-201ENST00000406438 IGLC2P0DOY2 106 aa9.53□□□□□ -0.88
SMCR8-201ENST00000406438 IGLC3P0DOY3 106 aa9.53□□□□□ -0.88
SMCR8-201ENST00000406438 C16orf74Q96GX8 76 aa9.53□□□□□ -0.88
SMCR8-201ENST00000406438 TIMM17AQ99595 171 aa9.53□□□□□ -0.88
SMCR8-201ENST00000406438 IGHG2P01859 326 aa9.53□□□□□ -0.88
SMCR8-201ENST00000406438 MRPL36Q9P0J6 103 aaKnown RBP9.53□□□□□ -0.88
SMCR8-201ENST00000406438 MYO18BQ8IUG5 2567 aa9.53□□□□□ -0.88
SMCR8-201ENST00000406438 IGHV4-4A0A075B6R2 117 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms