RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 NDUFA6P56556 154 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 LINC00315P59091 139 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 UBE2G2P60604 165 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 DIAPH2-AS1Q14236 149 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 ADIRFQ15847 76 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 VMA21Q3ZAQ7 101 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 SPNS3Q6ZMD2 512 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 MUC15Q8N387 334 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR4P4Q8NGL7 312 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 RNASEH2CQ8TDP1 164 aaKnown RBP2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 TNFRSF14Q92956 283 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 FMC1Q96HJ9 113 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 C12orf57Q99622 126 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 TMEM133Q9H2Q1 129 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 SND1-IT1Q9HBX3 110 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 WASHC3Q9Y3C0 194 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 KNTC1P50748 2209 aa2.81□□□□□ -1.96
HMGB3P18-201ENST00000406327 IGKV1OR2-108A0A075B7D4 117 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 LY6LH3BQJ8 138 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 BUB1B-PAK6H3BSN5 160 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 H7BYZ3 331 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 HIST1H2BKO60814 126 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 GGCTO75223 188 aaKnown RBP2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 RBP4P02753 201 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 HIST1H2BJP06899 126 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR5G3P0C626 314 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 TRGC1P0CF51 173 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 CD99P14209 185 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 HIST1H2BOP23527 126 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 S100PP25815 95 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR10J1P30954 320 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 HIST1H2BBP33778 126 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 SRP14P37108 136 aaKnown RBP2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 ATP5G3P48201 142 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 HIST1H2BDP58876 126 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 KRTAP12-2P59991 146 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 HIST1H2BCP62807 126 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 WT1-ASQ06250 92 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 HIST2H2BEQ16778 126 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 HLA-DRB5Q30154 266 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 FAM162BQ5T6X4 162 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 FAM78BQ5VT40 261 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 SPATA31B1PQ5VZV4 182 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 MIR17HGQ75NE6 70 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 PRNTQ86SH4 94 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 LY6G5BQ8NDX9 201 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR2T10Q8NGZ9 312 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 HIST1H2BHQ93079 126 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 IMMP2LQ96T52 175 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 HIST1H2BNQ99877 126 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 HIST1H2BMQ99879 126 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 TCEAL7Q9BRU2 100 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 TMEM167BQ9NRX6 74 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 CBLN4Q9NTU7 201 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 FUT9Q9Y231 359 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 LY96Q9Y6Y9 160 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 ARL2-SNX15V9GYD0 113 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 MYO7BQ6PIF6 2116 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 MED12LQ86YW9 2145 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 PTPRBP23467 1997 aa2.8□□□□□ -1.96
HMGB3P18-201ENST00000406327 CNTRLQ7Z7A1 2325 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 TRBV20OR9-2A0A075B6H5 130 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 IGKV1D-37A0A075B6S9 117 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 TRAV8-3A0A0A6YYJ7 113 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 TCRBV4S1A1TA0A5B7 111 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 IGLC7A0M8Q6 106 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 C9JCJ5 164 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 PPP5D1E7EU14 171 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 M0QXV9 152 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 LGALS9O00182 355 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 IGLV7-43P04211 117 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 TYMSP04818 313 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 SOD3P08294 240 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 SMIM6P0DI80 62 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 C8orf88P0DMB2 117 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 TAS2R45P59539 299 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 C10orf55Q5SWW7 151 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 ZFAND6Q6FIF0 208 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 PATE2Q6UY27 113 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR11H6Q8NGC7 330 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR8B3Q8NGG8 313 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR4X1Q8NH49 305 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 ACY3Q96HD9 319 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 SFRP2Q96HF1 295 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 BTF3L4Q96K17 158 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 FAM167A-AS1Q96KT0 104 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR8B2Q96RD0 313 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 DERL1Q9BUN8 251 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 MRPL32Q9BYC8 188 aaKnown RBP2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 PRO0461Q9UI25 63 aa2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 AMMECR1Q9Y4X0 333 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P18-201ENST00000406327 DNAJC13O75165 2243 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 DMDP11532 3685 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 FRYQ5TBA9 3013 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 CACNA1HO95180 2353 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 TRAV5A0A0B4J249 113 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 MDFIC2A0A1B0GVS7 189 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 A0A1W2PRE2 83 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms