RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 HLA-DRB4X5D2U9 266 aa11.97□□□□□ -0.49
CGREF1-205ENST00000404694 PLECQ15149 4684 aaKnown RBP11.97□□□□□ -0.49
CGREF1-205ENST00000404694 A8MTW9 85 aa11.96□□□□□ -0.49
CGREF1-205ENST00000404694 CRISP2P16562 243 aa11.96□□□□□ -0.49
CGREF1-205ENST00000404694 RPL19P84098 196 aaKnown RBP11.96□□□□□ -0.49
CGREF1-205ENST00000404694 DAZAP1Q96EP5 407 aaKnown RBP11.96□□□□□ -0.49
CGREF1-205ENST00000404694 FAM19A4Q96LR4 140 aa11.96□□□□□ -0.49
CGREF1-205ENST00000404694 V9GYV3 84 aa11.96□□□□□ -0.49
CGREF1-205ENST00000404694 GATCO43716 136 aaKnown RBP11.95□□□□□ -0.5
CGREF1-205ENST00000404694 TSPOP30536 169 aa11.95□□□□□ -0.5
CGREF1-205ENST00000404694 NUTF2P61970 127 aaKnown RBP11.95□□□□□ -0.5
CGREF1-205ENST00000404694 NHLRC2Q8NBF2 726 aa11.95□□□□□ -0.5
CGREF1-205ENST00000404694 CSNK1G2-AS1Q8NCQ2 148 aa11.95□□□□□ -0.5
CGREF1-205ENST00000404694 Q8TAT8 98 aa11.95□□□□□ -0.5
CGREF1-205ENST00000404694 ZC2HC1AQ96GY0 325 aa11.95□□□□□ -0.5
CGREF1-205ENST00000404694 C19orf71A6NCJ1 209 aa11.94□□□□□ -0.5
CGREF1-205ENST00000404694 ZNF705GA8MUZ8 300 aaPredicted RBP11.94□□□□□ -0.5
CGREF1-205ENST00000404694 F6UB75 175 aa11.94□□□□□ -0.5
CGREF1-205ENST00000404694 LEPP41159 167 aa11.94□□□□□ -0.5
CGREF1-205ENST00000404694 CT83Q5H943 113 aa11.94□□□□□ -0.5
CGREF1-205ENST00000404694 FAM162BQ5T6X4 162 aa11.94□□□□□ -0.5
CGREF1-205ENST00000404694 Q8NAQ8 132 aa11.94□□□□□ -0.5
CGREF1-205ENST00000404694 NUDT10Q8NFP7 164 aa11.94□□□□□ -0.5
CGREF1-205ENST00000404694 OR4B1Q8NGF8 309 aa11.94□□□□□ -0.5
CGREF1-205ENST00000404694 NUDT11Q96G61 164 aa11.94□□□□□ -0.5
CGREF1-205ENST00000404694 FAM210BQ96KR6 192 aa11.94□□□□□ -0.5
CGREF1-205ENST00000404694 RNASE7Q9H1E1 156 aaKnown RBP11.94□□□□□ -0.5
CGREF1-205ENST00000404694 TMA7Q9Y2S6 64 aaKnown RBP11.94□□□□□ -0.5
CGREF1-205ENST00000404694 DNAH1Q9P2D7 4330 aa11.94□□□□□ -0.5
CGREF1-205ENST00000404694 FABP5P3A8MUU1 101 aa11.93□□□□□ -0.5
CGREF1-205ENST00000404694 DEFB4AO15263 64 aa11.93□□□□□ -0.5
CGREF1-205ENST00000404694 ZNF705DP0CH99 300 aaPredicted RBP11.93□□□□□ -0.5
CGREF1-205ENST00000404694 ZNF705BP0CI00 300 aaPredicted RBP11.93□□□□□ -0.5
CGREF1-205ENST00000404694 C8orf49Q96NF6 230 aa11.93□□□□□ -0.5
CGREF1-205ENST00000404694 C1QTNF4Q9BXJ3 329 aa11.93□□□□□ -0.5
CGREF1-205ENST00000404694 X6R8D5 127 aa11.93□□□□□ -0.5
CGREF1-205ENST00000404694 ALMS1Q8TCU4 4167 aa11.93□□□□□ -0.5
CGREF1-205ENST00000404694 TGIF2-C20orf24A0A0A6YYL0 155 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 NUPR2A6NF83 97 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 P01737 135 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 PRR27Q6MZM9 219 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 ZFAND2AQ8N6M9 145 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 XCL2Q9UBD3 114 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 IGHV4-28A0A0C4DH34 117 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 A0A1W2PPQ1 181 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 KLLNB2CW77 178 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 TYMSP04818 313 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 CXCL1P09341 107 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 MIFP14174 115 aa11.92□□□□□ -0.5
CGREF1-205ENST00000404694 RPP21Q9H633 154 aaKnown RBP11.92□□□□□ -0.5
CGREF1-205ENST00000404694 SMIM27A0A1W2PRY6 76 aa11.91□□□□□ -0.5
CGREF1-205ENST00000404694 FAM231BA6NCW3 169 aa11.91□□□□□ -0.5
CGREF1-205ENST00000404694 A8MWL6 223 aa11.91□□□□□ -0.5
CGREF1-205ENST00000404694 C1orf196B1AJZ1 125 aa11.91□□□□□ -0.5
CGREF1-205ENST00000404694 AMBPP02760 352 aa11.91□□□□□ -0.5
CGREF1-205ENST00000404694 GPX1P07203 203 aa11.91□□□□□ -0.5
CGREF1-205ENST00000404694 RBMY1A1P0DJD3 496 aaKnown RBP11.91□□□□□ -0.5
CGREF1-205ENST00000404694 RBMY1CP0DJD4 496 aa11.91□□□□□ -0.5
CGREF1-205ENST00000404694 PRB4P10163 310 aaPredicted RBP11.91□□□□□ -0.5
CGREF1-205ENST00000404694 RPS10P46783 165 aaKnown RBP11.91□□□□□ -0.5
CGREF1-205ENST00000404694 RBMY1FQ15415 496 aaKnown RBP11.91□□□□□ -0.5
CGREF1-205ENST00000404694 CEMP1Q6PRD7 247 aaPredicted RBP11.91□□□□□ -0.5
CGREF1-205ENST00000404694 C11orf45Q8TAV5 145 aa11.91□□□□□ -0.5
CGREF1-205ENST00000404694 TSKUQ8WUA8 353 aa11.91□□□□□ -0.5
CGREF1-205ENST00000404694 TRAV21A0A0B4J279 112 aa11.9□□□□□ -0.5
CGREF1-205ENST00000404694 XKRY2A2RUG3 117 aa11.9□□□□□ -0.5
CGREF1-205ENST00000404694 SH2D1AO60880 128 aa11.9□□□□□ -0.5
CGREF1-205ENST00000404694 CDKN1BP46527 198 aa11.9□□□□□ -0.5
CGREF1-205ENST00000404694 CRIP1P50238 77 aa11.9□□□□□ -0.5
CGREF1-205ENST00000404694 FAM3BP58499 235 aaPredicted RBP11.9□□□□□ -0.5
CGREF1-205ENST00000404694 FXYD7P58549 80 aa11.9□□□□□ -0.5
CGREF1-205ENST00000404694 NANOS2P60321 138 aaKnown RBP11.9□□□□□ -0.5
CGREF1-205ENST00000404694 RPS20P60866 119 aaKnown RBP11.9□□□□□ -0.5
CGREF1-205ENST00000404694 RAB5BP61020 215 aa11.9□□□□□ -0.5
CGREF1-205ENST00000404694 Q6AWC8 147 aa11.9□□□□□ -0.5
CGREF1-205ENST00000404694 AMTNQ6UX39 209 aa11.9□□□□□ -0.5
CGREF1-205ENST00000404694 PHLDA1Q8WV24 401 aaPredicted RBP11.9□□□□□ -0.5
CGREF1-205ENST00000404694 GFRA4Q9GZZ7 299 aa11.9□□□□□ -0.5
CGREF1-205ENST00000404694 HYDINQ4G0P3 5121 aa11.89□□□□□ -0.51
CGREF1-205ENST00000404694 COX19Q49B96 90 aa11.89□□□□□ -0.51
CGREF1-205ENST00000404694 ZNF80P51504 273 aaPredicted RBP11.88□□□□□ -0.51
CGREF1-205ENST00000404694 NAT8BQ9UHF3 227 aa11.88□□□□□ -0.51
CGREF1-205ENST00000404694 C7orf71A4D174 169 aa11.87□□□□□ -0.51
CGREF1-205ENST00000404694 LINC01559Q495D7 138 aa11.87□□□□□ -0.51
CGREF1-205ENST00000404694 ZNF705AQ6ZN79 300 aaPredicted RBP11.87□□□□□ -0.51
CGREF1-205ENST00000404694 C20orf144Q9BQM9 153 aa11.87□□□□□ -0.51
CGREF1-205ENST00000404694 KLK5Q9Y337 293 aaPredicted RBP11.87□□□□□ -0.51
CGREF1-205ENST00000404694 TMEM189A5PLL7 270 aa11.86□□□□□ -0.51
CGREF1-205ENST00000404694 RASL11AQ6T310 242 aa11.86□□□□□ -0.51
CGREF1-205ENST00000404694 OR2D3Q8NGH3 330 aa11.86□□□□□ -0.51
CGREF1-205ENST00000404694 RNASE4P34096 147 aaKnown RBP11.85□□□□□ -0.51
CGREF1-205ENST00000404694 LINC00476Q8WZB0 136 aa11.85□□□□□ -0.51
CGREF1-205ENST00000404694 IGHV3OR16-12A0A075B7B8 117 aa11.84□□□□□ -0.51
CGREF1-205ENST00000404694 ORM1P02763 201 aa11.84□□□□□ -0.51
CGREF1-205ENST00000404694 FOXA3P55318 350 aaPredicted RBP11.84□□□□□ -0.51
CGREF1-205ENST00000404694 SPINK13Q1W4C9 94 aa11.84□□□□□ -0.51
CGREF1-205ENST00000404694 PRR9Q5T870 116 aa11.84□□□□□ -0.51
CGREF1-205ENST00000404694 WDR73Q6P4I2 378 aa11.84□□□□□ -0.51
CGREF1-205ENST00000404694 ATP5L2Q7Z4Y8 100 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms