RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 MUC4Q99102 2169 aa11.42□□□□□ -0.58
HMGA1-204ENST00000401473 LINC00862A6NCI5 91 aa11.42□□□□□ -0.58
HMGA1-204ENST00000401473 CBY3A6NI87 242 aa11.42□□□□□ -0.58
HMGA1-204ENST00000401473 ZNF727A8MUV8 499 aa11.42□□□□□ -0.58
HMGA1-204ENST00000401473 MGST1P10620 155 aaKnown RBP11.42□□□□□ -0.58
HMGA1-204ENST00000401473 C11orf72Q8NBR9 251 aa11.42□□□□□ -0.58
HMGA1-204ENST00000401473 TMEM263Q8WUH6 116 aaKnown RBP11.42□□□□□ -0.58
HMGA1-204ENST00000401473 SMIM12Q96EX1 92 aa11.42□□□□□ -0.58
HMGA1-204ENST00000401473 MDFICQ9P1T7 246 aa11.42□□□□□ -0.58
HMGA1-204ENST00000401473 C11orf68Q9H3H3 251 aaKnown RBP11.41□□□□□ -0.58
HMGA1-204ENST00000401473 GSN-AS1Q9NRJ2 163 aa11.41□□□□□ -0.58
HMGA1-204ENST00000401473 TENM2Q9NT68 2774 aa11.41□□□□□ -0.58
HMGA1-204ENST00000401473 M0R036 132 aa11.4□□□□□ -0.58
HMGA1-204ENST00000401473 ORM1P02763 201 aa11.4□□□□□ -0.58
HMGA1-204ENST00000401473 ZNF493Q6ZR52 646 aa11.4□□□□□ -0.58
HMGA1-204ENST00000401473 C16orf74Q96GX8 76 aa11.4□□□□□ -0.58
HMGA1-204ENST00000401473 CELA1Q9UNI1 258 aa11.4□□□□□ -0.58
HMGA1-204ENST00000401473 C19orf71A6NCJ1 209 aa11.4□□□□□ -0.59
HMGA1-204ENST00000401473 TYMSP04818 313 aa11.4□□□□□ -0.59
HMGA1-204ENST00000401473 SOHLH1Q5JUK2 328 aa11.4□□□□□ -0.59
HMGA1-204ENST00000401473 LINC01551Q86U37 167 aa11.4□□□□□ -0.59
HMGA1-204ENST00000401473 COMMD7Q86VX2 200 aa11.4□□□□□ -0.59
HMGA1-204ENST00000401473 KRBOX1C9JBD0 128 aa11.39□□□□□ -0.59
HMGA1-204ENST00000401473 SFTA3P0C7M3 94 aa11.39□□□□□ -0.59
HMGA1-204ENST00000401473 RPL19P84098 196 aaKnown RBP11.39□□□□□ -0.59
HMGA1-204ENST00000401473 SLC7A5P1Q8MH63 180 aa11.39□□□□□ -0.59
HMGA1-204ENST00000401473 KCNS1Q96KK3 526 aa11.39□□□□□ -0.59
HMGA1-204ENST00000401473 NOP10Q9NPE3 64 aaKnown RBP11.39□□□□□ -0.59
HMGA1-204ENST00000401473 IGHV3-16A0A0C4DH30 117 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 FAM74A3Q4VXF1 159 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 SDF2L1Q9HCN8 221 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 DKK2Q9UBU2 259 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 TIMM8BQ9Y5J9 83 aaPredicted RBP11.38□□□□□ -0.59
HMGA1-204ENST00000401473 LY96Q9Y6Y9 160 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 TMEM189A5PLL7 270 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 B4DEV8 164 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 TMEM241Q24JQ0 296 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 LINC01559Q495D7 138 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 IBA57Q5T440 356 aaKnown RBP11.38□□□□□ -0.59
HMGA1-204ENST00000401473 FAM222AQ5U5X8 452 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 UQCC3Q6UW78 93 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 NUDT10Q8NFP7 164 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 NUDT11Q96G61 164 aa11.38□□□□□ -0.59
HMGA1-204ENST00000401473 RNASE7Q9H1E1 156 aaKnown RBP11.38□□□□□ -0.59
HMGA1-204ENST00000401473 TMSB15BA0A087X1C1 80 aa11.37□□□□□ -0.59
HMGA1-204ENST00000401473 RNASE3P12724 160 aaKnown RBP11.37□□□□□ -0.59
HMGA1-204ENST00000401473 NDUFA5Q16718 116 aa11.37□□□□□ -0.59
HMGA1-204ENST00000401473 IL17DQ8TAD2 202 aa11.37□□□□□ -0.59
HMGA1-204ENST00000401473 STARD9Q9P2P6 4700 aa11.37□□□□□ -0.59
HMGA1-204ENST00000401473 GRIFINA4D1Z8 144 aa11.36□□□□□ -0.59
HMGA1-204ENST00000401473 TCL1AP56279 114 aa11.36□□□□□ -0.59
HMGA1-204ENST00000401473 RPL23P62829 140 aaKnown RBP11.36□□□□□ -0.59
HMGA1-204ENST00000401473 DAZ2Q13117 558 aaKnown RBP11.36□□□□□ -0.59
HMGA1-204ENST00000401473 WWC2-AS2Q96NR7 200 aa11.36□□□□□ -0.59
HMGA1-204ENST00000401473 TRGV11A0A075B6L2 103 aa11.36□□□□□ -0.59
HMGA1-204ENST00000401473 TMEM218A2RU14 115 aa11.36□□□□□ -0.59
HMGA1-204ENST00000401473 ADCYAP1P18509 176 aa11.36□□□□□ -0.59
HMGA1-204ENST00000401473 DAZAP1Q96EP5 407 aaKnown RBP11.36□□□□□ -0.59
HMGA1-204ENST00000401473 SNURFLB1AK76 121 aa11.35□□□□□ -0.59
HMGA1-204ENST00000401473 SPART-AS1P0CW21 52 aa11.35□□□□□ -0.59
HMGA1-204ENST00000401473 NANOS2P60321 138 aaKnown RBP11.35□□□□□ -0.59
HMGA1-204ENST00000401473 C11orf45Q8TAV5 145 aa11.35□□□□□ -0.59
HMGA1-204ENST00000401473 NAT8Q9UHE5 227 aa11.35□□□□□ -0.59
HMGA1-204ENST00000401473 C12orf74Q32Q52 190 aa11.34□□□□□ -0.59
HMGA1-204ENST00000401473 Q6ZTI0 123 aa11.34□□□□□ -0.59
HMGA1-204ENST00000401473 BIN3Q9NQY0 253 aa11.34□□□□□ -0.59
HMGA1-204ENST00000401473 NACAE9PAV3 2078 aa11.34□□□□□ -0.59
HMGA1-204ENST00000401473 CXorf65A6NEN9 183 aa11.34□□□□□ -0.59
HMGA1-204ENST00000401473 P01737 135 aa11.34□□□□□ -0.59
HMGA1-204ENST00000401473 GZMBP10144 247 aa11.34□□□□□ -0.59
HMGA1-204ENST00000401473 ZNF415Q09FC8 603 aa11.34□□□□□ -0.59
HMGA1-204ENST00000401473 DNLZQ5SXM8 178 aa11.34□□□□□ -0.59
HMGA1-204ENST00000401473 LYRM9A8MSI8 78 aa11.33□□□□□ -0.6
HMGA1-204ENST00000401473 SPINK4O60575 86 aa11.33□□□□□ -0.6
HMGA1-204ENST00000401473 DEFB130BP0DP73 79 aa11.33□□□□□ -0.6
HMGA1-204ENST00000401473 DEFB130AP0DP74 79 aa11.33□□□□□ -0.6
HMGA1-204ENST00000401473 OR2D3Q8NGH3 330 aa11.33□□□□□ -0.6
HMGA1-204ENST00000401473 ISOC2Q96AB3 205 aa11.33□□□□□ -0.6
HMGA1-204ENST00000401473 C9orf85Q96MD7 179 aa11.33□□□□□ -0.6
HMGA1-204ENST00000401473 ARMS2P0C7Q2 107 aa11.32□□□□□ -0.6
HMGA1-204ENST00000401473 ERVFC1-1P60608 527 aa11.32□□□□□ -0.6
HMGA1-204ENST00000401473 ADIRFQ15847 76 aa11.32□□□□□ -0.6
HMGA1-204ENST00000401473 FAM231DQ6ZW35 169 aa11.32□□□□□ -0.6
HMGA1-204ENST00000401473 IL36BQ9NZH7 164 aa11.32□□□□□ -0.6
HMGA1-204ENST00000401473 S100A4P26447 101 aaKnown RBP11.32□□□□□ -0.6
HMGA1-204ENST00000401473 ASIPP42127 132 aa11.32□□□□□ -0.6
HMGA1-204ENST00000401473 Q6ZTC4 211 aa11.32□□□□□ -0.6
HMGA1-204ENST00000401473 LINC00612Q8N6U2 182 aa11.32□□□□□ -0.6
HMGA1-204ENST00000401473 TRGV1A0A0A0MS02 117 aa11.31□□□□□ -0.6
HMGA1-204ENST00000401473 GAGE12BA1L429 117 aa11.31□□□□□ -0.6
HMGA1-204ENST00000401473 H3BVH4 76 aa11.31□□□□□ -0.6
HMGA1-204ENST00000401473 GAGE7O76087 117 aa11.31□□□□□ -0.6
HMGA1-204ENST00000401473 GAGE12FP0CL80 117 aa11.31□□□□□ -0.6
HMGA1-204ENST00000401473 GAGE12GP0CL81 117 aa11.31□□□□□ -0.6
HMGA1-204ENST00000401473 GAGE12IP0CL82 117 aa11.31□□□□□ -0.6
HMGA1-204ENST00000401473 RASL10AQ92737 203 aa11.31□□□□□ -0.6
HMGA1-204ENST00000401473 SPXQ9BT56 116 aa11.31□□□□□ -0.6
HMGA1-204ENST00000401473 SCRT2Q9NQ03 307 aa11.31□□□□□ -0.6
HMGA1-204ENST00000401473 MRPL16Q9NX20 251 aaKnown RBP11.31□□□□□ -0.6
HMGA1-204ENST00000401473 LYSTQ99698 3801 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms