RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 I3L2K1 104 aa14.26□□□□□ -0.13
COL18A1-204ENST00000400337 K7EIM0 57 aa14.26□□□□□ -0.13
COL18A1-204ENST00000400337 IGLL1P15814 213 aa14.26□□□□□ -0.13
COL18A1-204ENST00000400337 INS-IGF2F8WCM5 200 aa14.26□□□□□ -0.13
COL18A1-204ENST00000400337 LGALS9BQ3B8N2 356 aa14.25□□□□□ -0.13
COL18A1-204ENST00000400337 LGALS9CQ6DKI2 356 aa14.25□□□□□ -0.13
COL18A1-204ENST00000400337 GTSF1LQ9H1H1 148 aa14.25□□□□□ -0.13
COL18A1-204ENST00000400337 BLCAPP62952 87 aa14.25□□□□□ -0.13
COL18A1-204ENST00000400337 PLA2G5P39877 138 aa14.25□□□□□ -0.13
COL18A1-204ENST00000400337 CFHR4Q92496 578 aa14.25□□□□□ -0.13
COL18A1-204ENST00000400337 PFN2P35080 140 aa14.25□□□□□ -0.13
COL18A1-204ENST00000400337 OVOL2Q9BRP0 275 aa14.25□□□□□ -0.13
COL18A1-204ENST00000400337 IGKV1-17P01599 117 aa14.24□□□□□ -0.13
COL18A1-204ENST00000400337 FOXI2Q6ZQN5 318 aa14.24□□□□□ -0.13
COL18A1-204ENST00000400337 SPAG8Q99932 426 aaPredicted RBP14.24□□□□□ -0.13
COL18A1-204ENST00000400337 PYGO2Q9BRQ0 406 aa14.24□□□□□ -0.13
COL18A1-204ENST00000400337 MORN5Q5VZ52 161 aa14.24□□□□□ -0.13
COL18A1-204ENST00000400337 EML6Q6ZMW3 1958 aa14.24□□□□□ -0.13
COL18A1-204ENST00000400337 APOC4P55056 127 aa14.24□□□□□ -0.13
COL18A1-204ENST00000400337 COL4A3Q01955 1670 aa14.23□□□□□ -0.13
COL18A1-204ENST00000400337 CUL9Q8IWT3 2517 aa14.23□□□□□ -0.13
COL18A1-204ENST00000400337 MRPL53Q96EL3 112 aaKnown RBP14.23□□□□□ -0.13
COL18A1-204ENST00000400337 IGLV11-55A0A075B6I3 123 aa14.23□□□□□ -0.13
COL18A1-204ENST00000400337 SPRY2O43597 315 aa14.23□□□□□ -0.13
COL18A1-204ENST00000400337 DEFB113Q30KQ7 82 aa14.23□□□□□ -0.13
COL18A1-204ENST00000400337 C2orf16Q68DN1 1984 aa14.23□□□□□ -0.13
COL18A1-204ENST00000400337 NRGNQ92686 78 aa14.23□□□□□ -0.13
COL18A1-204ENST00000400337 ZNF561-AS1K7EIQ3 104 aa14.22□□□□□ -0.13
COL18A1-204ENST00000400337 GP9P14770 177 aa14.22□□□□□ -0.13
COL18A1-204ENST00000400337 PATE2Q6UY27 113 aa14.22□□□□□ -0.13
COL18A1-204ENST00000400337 C20orf78Q9BR46 151 aa14.22□□□□□ -0.13
COL18A1-204ENST00000400337 A0A096LPF7 62 aa14.22□□□□□ -0.13
COL18A1-204ENST00000400337 F8VRH5 84 aa14.22□□□□□ -0.13
COL18A1-204ENST00000400337 COX8AP10176 69 aa14.22□□□□□ -0.13
COL18A1-204ENST00000400337 MSMPQ1L6U9 139 aa14.22□□□□□ -0.13
COL18A1-204ENST00000400337 PLA2G2EQ9NZK7 142 aa14.22□□□□□ -0.13
COL18A1-204ENST00000400337 CTSGP08311 255 aa14.21□□□□□ -0.13
COL18A1-204ENST00000400337 DYSFO75923 2080 aa14.21□□□□□ -0.13
COL18A1-204ENST00000400337 TSSC4Q9Y5U2 329 aaPredicted RBP14.21□□□□□ -0.14
COL18A1-204ENST00000400337 RBAKDNA6NC62 111 aa14.2□□□□□ -0.14
COL18A1-204ENST00000400337 CCL24O00175 119 aa14.2□□□□□ -0.14
COL18A1-204ENST00000400337 AJUBAQ96IF1 538 aa14.2□□□□□ -0.14
COL18A1-204ENST00000400337 NDUFA12Q9UI09 145 aa14.2□□□□□ -0.14
COL18A1-204ENST00000400337 FREM1Q5H8C1 2179 aa14.2□□□□□ -0.14
COL18A1-204ENST00000400337 PLCE1Q9P212 2302 aa14.2□□□□□ -0.14
COL18A1-204ENST00000400337 RNASE13Q5GAN3 156 aaKnown RBP14.2□□□□□ -0.14
COL18A1-204ENST00000400337 GAGE2AQ6NT46 116 aa14.2□□□□□ -0.14
COL18A1-204ENST00000400337 C10orf105Q8TEF2 133 aa14.2□□□□□ -0.14
COL18A1-204ENST00000400337 Q8N9W7 124 aa14.2□□□□□ -0.14
COL18A1-204ENST00000400337 SLURP1P55000 103 aa14.19□□□□□ -0.14
COL18A1-204ENST00000400337 DKK2Q9UBU2 259 aa14.19□□□□□ -0.14
COL18A1-204ENST00000400337 LENEPQ9Y5L5 61 aa14.19□□□□□ -0.14
COL18A1-204ENST00000400337 ANKHD1Q8IWZ3 2542 aaKnown RBP14.19□□□□□ -0.14
COL18A1-204ENST00000400337 DNAJC30Q96LL9 226 aa14.19□□□□□ -0.14
COL18A1-204ENST00000400337 C9orf118A6NHY6 69 aa14.19□□□□□ -0.14
COL18A1-204ENST00000400337 IGF2BP2-AS1Q96M15 143 aa14.18□□□□□ -0.14
COL18A1-204ENST00000400337 IGLV2-14P01704 120 aa14.18□□□□□ -0.14
COL18A1-204ENST00000400337 SRSF2Q01130 221 aaKnown RBP14.18□□□□□ -0.14
COL18A1-204ENST00000400337 WIPF2Q8TF74 440 aaPredicted RBP14.18□□□□□ -0.14
COL18A1-204ENST00000400337 NOP10Q9NPE3 64 aaKnown RBP14.18□□□□□ -0.14
COL18A1-204ENST00000400337 NXPH4O95158 308 aa14.18□□□□□ -0.14
COL18A1-204ENST00000400337 ZFP36P26651 326 aaKnown RBP14.18□□□□□ -0.14
COL18A1-204ENST00000400337 APRG1Q8IVJ8 170 aa14.17□□□□□ -0.14
COL18A1-204ENST00000400337 U3KQE9 123 aa14.17□□□□□ -0.14
COL18A1-204ENST00000400337 GATA1P15976 413 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-204ENST00000400337 KLF12Q9Y4X4 402 aa14.17□□□□□ -0.14
COL18A1-204ENST00000400337 IGLV1-47P01700 117 aa14.17□□□□□ -0.14
COL18A1-204ENST00000400337 IGLV2-23P01705 113 aa14.17□□□□□ -0.14
COL18A1-204ENST00000400337 ODF3L1Q8IXM7 274 aa14.17□□□□□ -0.14
COL18A1-204ENST00000400337 ZNF48Q96MX3 618 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-204ENST00000400337 Q8N7P7 452 aa14.16□□□□□ -0.14
COL18A1-204ENST00000400337 SPINK8P0C7L1 97 aa14.16□□□□□ -0.14
COL18A1-204ENST00000400337 MAJINQ3KP22 176 aa14.16□□□□□ -0.14
COL18A1-204ENST00000400337 F8WEM9 126 aa14.16□□□□□ -0.14
COL18A1-204ENST00000400337 C5orf56Q8N8D9 126 aa14.16□□□□□ -0.14
COL18A1-204ENST00000400337 ZNF493Q6ZR52 646 aa14.16□□□□□ -0.14
COL18A1-204ENST00000400337 Q8NA96 180 aa14.16□□□□□ -0.14
COL18A1-204ENST00000400337 BUB3O43684 328 aa14.15□□□□□ -0.14
COL18A1-204ENST00000400337 CACNA1AO00555 2505 aa14.15□□□□□ -0.14
COL18A1-204ENST00000400337 E7EUB6 86 aa14.15□□□□□ -0.14
COL18A1-204ENST00000400337 ZNF747Q9BV97 191 aa14.15□□□□□ -0.14
COL18A1-204ENST00000400337 TEX22C9J3V5 150 aa14.15□□□□□ -0.14
COL18A1-204ENST00000400337 J3QQQ9 107 aa14.15□□□□□ -0.14
COL18A1-204ENST00000400337 BVES-AS1Q5T3Y7 98 aa14.15□□□□□ -0.14
COL18A1-204ENST00000400337 KLF2Q9Y5W3 355 aaPredicted RBP14.15□□□□□ -0.14
COL18A1-204ENST00000400337 TRBV20-1A0A075B6N2 111 aa14.15□□□□□ -0.14
COL18A1-204ENST00000400337 ANGP03950 147 aaKnown RBP14.14□□□□□ -0.15
COL18A1-204ENST00000400337 KLF5Q13887 457 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-204ENST00000400337 CLPSL2Q6UWE3 100 aa14.14□□□□□ -0.15
COL18A1-204ENST00000400337 FAM167A-AS1Q96KT0 104 aa14.14□□□□□ -0.15
COL18A1-204ENST00000400337 PRSS29PA6NIE9 313 aa14.13□□□□□ -0.15
COL18A1-204ENST00000400337 ADAMTS9Q9P2N4 1935 aa14.13□□□□□ -0.15
COL18A1-204ENST00000400337 IGKV1OR2-108A0A075B7D4 117 aa14.13□□□□□ -0.15
COL18A1-204ENST00000400337 DAZAP2Q15038 168 aaPredicted RBP14.13□□□□□ -0.15
COL18A1-204ENST00000400337 CSPG4Q6UVK1 2322 aa14.13□□□□□ -0.15
COL18A1-204ENST00000400337 H3BMM0 161 aa14.13□□□□□ -0.15
COL18A1-204ENST00000400337 HERVK_113P63121 156 aa14.13□□□□□ -0.15
COL18A1-204ENST00000400337 UBE2WQ96B02 151 aa14.13□□□□□ -0.15
COL18A1-204ENST00000400337 SRCAPQ6ZRS2 3230 aa14.13□□□□□ -0.15
COL18A1-204ENST00000400337 RHOHQ15669 191 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms