RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TRAV26-2A0A0B4J265 109 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 TREML4Q6UXN2 200 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 REG4Q9BYZ8 158 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 LRRC75A-AS1Q8N1F1 130 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 IGHV4-4A0A075B6R2 117 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 WDR83OSQ9Y284 106 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 ARMS2P0C7Q2 107 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 C18orf32Q8TCD1 76 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 IGKV1OR2-108A0A075B7D4 117 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 IGLC7A0M8Q6 106 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 ADAMTS9Q9P2N4 1935 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 IGHV2OR16-5A0A0B4J2B6 119 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 TMEM196Q5HYL7 178 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 IGF2BP2-AS1Q96M15 143 aa6.93□□□□□ -1.3
CACNA1C-220ENST00000399655 IGHV1-58A0A0C4DH39 117 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 COX7BP24311 80 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 UBE2D1P51668 147 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 CT62P0C5K7 136 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 PRSS57Q6UWY2 283 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 GFI1Q99684 422 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 SIGLEC9Q9Y336 463 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 PRR19A6NJB7 356 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 IGF1P05019 195 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 CRYGDP07320 174 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 SPINK2P20155 84 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 GPHA2Q96T91 129 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 IGHV1-69DA0A0B4J2H0 117 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 TM4SF4P48230 202 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 RNASE6Q93091 150 aaKnown RBP6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 Q6ZNB5 142 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 GATA4P43694 442 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 ALPK3Q96L96 1907 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 AMTNQ6UX39 209 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 VN1R4Q7Z5H5 301 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 RTBDNQ9BSG5 229 aaPredicted RBP6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 MRPL35Q9NZE8 188 aaKnown RBP6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 NRACQ8N912 160 aa6.92□□□□□ -1.3
CACNA1C-220ENST00000399655 CCL25O15444 150 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 CD177Q8N6Q3 437 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 IL17DQ8TAD2 202 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 V9GYV3 84 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 ASPHD1Q5U4P2 390 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 CHCHD2Q9Y6H1 151 aaPredicted RBP6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 SMKR1H3BMG3 65 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 ZNF706Q9Y5V0 76 aaPredicted RBP6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 WI2-2373I1.2A0A1W2PRP0 233 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 C5orf63A6NC05 138 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 B4DSR2 109 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 PCP2Q8IVA1 136 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 FGF23Q9GZV9 251 aaPredicted RBP6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 GPHB5Q86YW7 130 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 RHPN1-AS1Q9BWJ2 59 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 CENPVL1A0A0U1RR11 272 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 WISP1O95388 367 aa6.91□□□□□ -1.3
CACNA1C-220ENST00000399655 Q6ZVQ6 151 aa6.9□□□□□ -1.3
CACNA1C-220ENST00000399655 MSRB3Q8IXL7 192 aa6.9□□□□□ -1.3
CACNA1C-220ENST00000399655 PAX9P55771 341 aa6.9□□□□□ -1.3
CACNA1C-220ENST00000399655 Q8TAT8 98 aa6.9□□□□□ -1.3
CACNA1C-220ENST00000399655 COA6Q5JTJ3 125 aaKnown RBP6.9□□□□□ -1.31
CACNA1C-220ENST00000399655 FAM216BQ8N7L0 139 aa6.9□□□□□ -1.31
CACNA1C-220ENST00000399655 PKD1L2Q7Z442 2459 aa6.9□□□□□ -1.31
CACNA1C-220ENST00000399655 MRPL53Q96EL3 112 aaKnown RBP6.9□□□□□ -1.31
CACNA1C-220ENST00000399655 COLQQ9Y215 455 aaPredicted RBP6.9□□□□□ -1.31
CACNA1C-220ENST00000399655 C16orf47Q6ZP98 133 aaPredicted RBP6.9□□□□□ -1.31
CACNA1C-220ENST00000399655 WFDC10BQ8IUB3 73 aa6.9□□□□□ -1.31
CACNA1C-220ENST00000399655 WFDC5Q8TCV5 224 aa6.9□□□□□ -1.31
CACNA1C-220ENST00000399655 ZC2HC1AQ96GY0 325 aa6.9□□□□□ -1.31
CACNA1C-220ENST00000399655 DKK1O94907 266 aa6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 MTORP42345 2549 aa6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 SHANK2-AS3Q9BTD1 123 aa6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 WFDC10AQ9H1F0 79 aa6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 ATRAIDQ6UW56 229 aa6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 LYPD6Q86Y78 171 aa6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 IGKV1-39P01597 117 aa6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 IGKV1D-39P04432 117 aa6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 HIGD1BQ9P298 99 aa6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 KLK5Q9Y337 293 aaPredicted RBP6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 IGLV1-36A0A0B4J1U3 117 aa6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 NDPQ00604 133 aa6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 WIPF2Q8TF74 440 aaPredicted RBP6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 ZSWIM8A7E2V4 1837 aa6.89□□□□□ -1.31
CACNA1C-220ENST00000399655 HMGA1P17096 107 aaKnown RBP6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 LECT2O14960 151 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 KIAA0040Q15053 153 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 CAMTA1Q9Y6Y1 1673 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 MRPL51Q4U2R6 128 aaKnown RBP6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 LINC01555Q8NAE3 123 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 TRBV27A0A0K0K1C4 114 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 CCDC140Q96MF4 163 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 CECR9P0C854 216 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 VMO1Q7Z5L0 202 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 DIAPH2-AS1Q14236 149 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 NOTCH2Q04721 2471 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 KIAA1551Q9HCM1 1747 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 BDP1A6H8Y1 2624 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 CLEC2BQ92478 149 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 REPIN1Q9BWE0 567 aaKnown RBP6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 MST1LQ2TV78 715 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 DAND5Q8N907 189 aa6.88□□□□□ -1.31
CACNA1C-220ENST00000399655 C11orf52Q96A22 123 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms