RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 WFDC12Q8WWY7 111 aa10.72□□□□□ -0.69
APOB-202ENST00000399256 SCGB3A1Q96QR1 104 aa10.72□□□□□ -0.69
APOB-202ENST00000399256 TLN1Q9Y490 2541 aaKnown RBP10.72□□□□□ -0.69
APOB-202ENST00000399256 C15orf32Q32M92 178 aa10.72□□□□□ -0.69
APOB-202ENST00000399256 MRPL16Q9NX20 251 aaKnown RBP10.72□□□□□ -0.69
APOB-202ENST00000399256 RBAKDNA6NC62 111 aa10.71□□□□□ -0.69
APOB-202ENST00000399256 PRSS47A8MTI9 375 aa10.71□□□□□ -0.69
APOB-202ENST00000399256 CLEC3BP05452 202 aa10.71□□□□□ -0.69
APOB-202ENST00000399256 LGALS1P09382 135 aaKnown RBP10.71□□□□□ -0.69
APOB-202ENST00000399256 SCGB2A2Q13296 93 aa10.71□□□□□ -0.69
APOB-202ENST00000399256 PRR30Q53SZ7 412 aaPredicted RBP10.71□□□□□ -0.69
APOB-202ENST00000399256 LINC01560Q8TB33 94 aa10.71□□□□□ -0.69
APOB-202ENST00000399256 SMIM2Q9BVW6 85 aa10.71□□□□□ -0.69
APOB-202ENST00000399256 ZFAND3Q9H8U3 227 aa10.71□□□□□ -0.69
APOB-202ENST00000399256 ECSCRQ19T08 205 aa10.71□□□□□ -0.69
APOB-202ENST00000399256 IGHV7-81A0A0B4J1V7 117 aa10.71□□□□□ -0.7
APOB-202ENST00000399256 TRAV8-2A0A0B4J237 113 aa10.7□□□□□ -0.7
APOB-202ENST00000399256 ODF3BA8MYP8 253 aa10.7□□□□□ -0.7
APOB-202ENST00000399256 SLC50A1Q9BRV3 221 aa10.7□□□□□ -0.7
APOB-202ENST00000399256 TRAV12-1A0A0B4J245 112 aa10.7□□□□□ -0.7
APOB-202ENST00000399256 LINC01549A6NIU2 74 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 VKORC1Q9BQB6 163 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 PRADC1Q9BSG0 188 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 LOC107984156A0A0G2JMH3 177 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 M0R381 172 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 SMCPP49901 116 aaPredicted RBP10.69□□□□□ -0.7
APOB-202ENST00000399256 PRR9Q5T870 116 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 CLEC19AQ6UXS0 136 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 ARL17AQ8IVW1 177 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 SYT8Q8NBV8 401 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 RPL39LQ96EH5 51 aaKnown RBP10.69□□□□□ -0.7
APOB-202ENST00000399256 PRORYQ9H606 182 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 CLPSL1A2RUU4 121 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 PSMB2P49721 201 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 FOXI1Q12951 378 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 VMO1Q7Z5L0 202 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 NEXN-AS1Q8NBZ9 246 aa10.69□□□□□ -0.7
APOB-202ENST00000399256 ZNF815PA8K554 130 aa10.68□□□□□ -0.7
APOB-202ENST00000399256 IGF1P05019 195 aa10.68□□□□□ -0.7
APOB-202ENST00000399256 SCGB1D4Q6XE38 83 aa10.68□□□□□ -0.7
APOB-202ENST00000399256 C8orf86Q6ZUL3 223 aa10.68□□□□□ -0.7
APOB-202ENST00000399256 ZNF418Q8TF45 676 aaPredicted RBP10.68□□□□□ -0.7
APOB-202ENST00000399256 C1QTNF4Q9BXJ3 329 aa10.68□□□□□ -0.7
APOB-202ENST00000399256 CFAP126Q5VTH2 177 aa10.68□□□□□ -0.7
APOB-202ENST00000399256 Q8N6K4 173 aa10.68□□□□□ -0.7
APOB-202ENST00000399256 TOMM6Q96B49 74 aa10.68□□□□□ -0.7
APOB-202ENST00000399256 HIF1ANQ9NWT6 349 aa10.68□□□□□ -0.7
APOB-202ENST00000399256 LINC01619G3V211 115 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 PRTN3P24158 256 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 ZFP2Q6ZN57 461 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 NFE4Q86UQ8 179 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 GLMPQ8WWB7 406 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 DLX4Q92988 240 aaPredicted RBP10.67□□□□□ -0.7
APOB-202ENST00000399256 MRAP2Q96G30 205 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 SVEP1Q4LDE5 3571 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 SUMO2P61956 95 aaKnown RBP10.67□□□□□ -0.7
APOB-202ENST00000399256 SRSF9Q13242 221 aaKnown RBP eCLIP10.67□□□□□ -0.7
APOB-202ENST00000399256 ORMDL2Q53FV1 153 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 BAALCQ8WXS3 180 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 RASL10AQ92737 203 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 PTH2Q96A98 100 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 CACNA1BQ00975 2339 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 SLC25A16P16260 332 aa10.67□□□□□ -0.7
APOB-202ENST00000399256 ABCA4P78363 2273 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 IGHV4-4A0A075B6R2 117 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 TSPAN13O95857 204 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 MGPP08493 103 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 KLRB1Q12918 225 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 TCTEX1D4Q5JR98 221 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 C2orf66Q6UXQ4 117 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 KLHL30-AS1Q8NEE0 82 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 DEFB104AQ8WTQ1 72 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 CDIP1Q9H305 208 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 PRSS29PA6NIE9 313 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 GRNP28799 593 aaKnown RBP10.66□□□□□ -0.7
APOB-202ENST00000399256 C14orf178Q8N769 122 aaPredicted RBP10.66□□□□□ -0.7
APOB-202ENST00000399256 Q8N9W7 124 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 CCDC140Q96MF4 163 aa10.66□□□□□ -0.7
APOB-202ENST00000399256 TRAV26-1A0A087WT03 109 aa10.65□□□□□ -0.7
APOB-202ENST00000399256 M0R1W7 72 aa10.65□□□□□ -0.7
APOB-202ENST00000399256 FHL3Q13643 280 aa10.65□□□□□ -0.7
APOB-202ENST00000399256 LINC01548A6NM66 108 aa10.65□□□□□ -0.7
APOB-202ENST00000399256 ATP6V0E1O15342 81 aa10.65□□□□□ -0.7
APOB-202ENST00000399256 EMP1P54849 157 aa10.65□□□□□ -0.7
APOB-202ENST00000399256 ITPR1Q14643 2758 aa10.65□□□□□ -0.7
APOB-202ENST00000399256 G3V318 75 aa10.64□□□□□ -0.71
APOB-202ENST00000399256 MT-ATP8P03928 68 aa10.64□□□□□ -0.71
APOB-202ENST00000399256 C9orf47Q6ZRZ4 202 aa10.64□□□□□ -0.71
APOB-202ENST00000399256 FAM110DQ8TAY7 271 aaPredicted RBP10.64□□□□□ -0.71
APOB-202ENST00000399256 GEMIN7Q9H840 131 aaKnown RBP10.64□□□□□ -0.71
APOB-202ENST00000399256 TMEM238LA0A1B0GVL6 79 aa10.64□□□□□ -0.71
APOB-202ENST00000399256 A6NJY4 79 aa10.64□□□□□ -0.71
APOB-202ENST00000399256 TGFAP01135 160 aa10.64□□□□□ -0.71
APOB-202ENST00000399256 SPINK8P0C7L1 97 aa10.64□□□□□ -0.71
APOB-202ENST00000399256 C16orf92Q96LL3 132 aa10.64□□□□□ -0.71
APOB-202ENST00000399256 METTL26Q96S19 204 aa10.64□□□□□ -0.71
APOB-202ENST00000399256 ATRXP46100 2492 aa10.64□□□□□ -0.71
APOB-202ENST00000399256 FAM90A27PA6NNH2 459 aa10.64□□□□□ -0.71
APOB-202ENST00000399256 SPTA1P02549 2419 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms