RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 K7EIM0 57 aa6.52□□□□□ -1.37
SPTLC3-201ENST00000399002 IGHV7-81A0A0B4J1V7 117 aa6.52□□□□□ -1.37
SPTLC3-201ENST00000399002 FUSP35637 526 aaKnown RBP eCLIP6.52□□□□□ -1.37
SPTLC3-201ENST00000399002 MRPL23Q16540 153 aaKnown RBP6.52□□□□□ -1.37
SPTLC3-201ENST00000399002 K7ERJ3 54 aa6.52□□□□□ -1.37
SPTLC3-201ENST00000399002 ATOX1O00244 68 aa6.52□□□□□ -1.37
SPTLC3-201ENST00000399002 LYPD6Q86Y78 171 aa6.52□□□□□ -1.37
SPTLC3-201ENST00000399002 ODF3Q96PU9 254 aa6.52□□□□□ -1.37
SPTLC3-201ENST00000399002 RALGAPA1Q6GYQ0 2036 aa6.52□□□□□ -1.37
SPTLC3-201ENST00000399002 NOP10Q9NPE3 64 aaKnown RBP6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 GNRH2O43555 120 aa6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 DEFB113Q30KQ7 82 aa6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 DEFB112Q30KQ8 113 aa6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 ETDBQ3ZM63 59 aa6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 C5orf56Q8N8D9 126 aa6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 TET1Q8NFU7 2136 aa6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 ATP5G1P05496 136 aa6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 JMJD7-PLA2G4BH0Y9G9 81 aa6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 WISP1O95388 367 aa6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 TCF20Q9UGU0 1960 aaKnown RBP6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 NTN5Q8WTR8 489 aaPredicted RBP6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 C17orf77Q96MU5 243 aa6.51□□□□□ -1.37
SPTLC3-201ENST00000399002 GPHB5Q86YW7 130 aa6.5□□□□□ -1.37
SPTLC3-201ENST00000399002 COX7A2LO14548 114 aa6.5□□□□□ -1.37
SPTLC3-201ENST00000399002 E9PLD3 99 aa6.5□□□□□ -1.37
SPTLC3-201ENST00000399002 F6UB75 175 aa6.5□□□□□ -1.37
SPTLC3-201ENST00000399002 NXPH4O95158 308 aa6.5□□□□□ -1.37
SPTLC3-201ENST00000399002 IGHG2P01859 326 aa6.5□□□□□ -1.37
SPTLC3-201ENST00000399002 PRSS33Q8NF86 280 aa6.5□□□□□ -1.37
SPTLC3-201ENST00000399002 HEATR5BQ9P2D3 2071 aa6.5□□□□□ -1.37
SPTLC3-201ENST00000399002 PDE6GP18545 87 aa6.5□□□□□ -1.37
SPTLC3-201ENST00000399002 FGF23Q9GZV9 251 aaPredicted RBP6.5□□□□□ -1.37
SPTLC3-201ENST00000399002 ANAPC1Q9H1A4 1944 aa6.5□□□□□ -1.37
SPTLC3-201ENST00000399002 FSTL3O95633 263 aa6.5□□□□□ -1.37
SPTLC3-201ENST00000399002 BUB3O43684 328 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 MYCNOSP40205 109 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 PLXNB3Q9ULL4 1909 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 ZNF106Q9H2Y7 1883 aaKnown RBP6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 IGKV2-29A2NJV5 120 aaPredicted RBP6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 TEX22C9J3V5 150 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 SPART-AS1P0CW21 52 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 H7C423 109 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 CTSGP08311 255 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 C1orf43Q9BWL3 253 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 KMT2EQ8IZD2 1858 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 UNC13CQ8NB66 2214 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 H3BT86 120 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 BAALCQ8WXS3 180 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 FAM167A-AS1Q96KT0 104 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 C11orf1Q9H5F2 150 aa6.49□□□□□ -1.37
SPTLC3-201ENST00000399002 FANCMQ8IYD8 2048 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 ETDCA0A1B0GVM5 59 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 C10orf105Q8TEF2 133 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 PATE2Q6UY27 113 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 MDFICQ9P1T7 246 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 XCL1P47992 114 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 TRBV10-2A0A0K0K1G8 114 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 IGHV4-59P01825 116 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 MUSTN1Q8IVN3 82 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 Q8N9W7 124 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 OPRPNQ99935 248 aaPredicted RBP6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 CRYBA4P53673 196 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 LINC01620Q4KN68 170 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 TEN1Q86WV5 123 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 LINC00574Q9H8X3 128 aa6.48□□□□□ -1.37
SPTLC3-201ENST00000399002 IGKV2D-24A0A075B6R9 120 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 CCL25O15444 150 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 KIF26BQ2KJY2 2108 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 SND1-IT1Q9HBX3 110 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 NDUFC2O95298 119 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 FBXL19-AS1Q494R0 122 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 AJUBAQ96IF1 538 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 TRBV7-3A0A075B6L6 115 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 TRAV4A0A0B4J268 109 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 CGB3P0DN86 165 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 TIRAPP58753 221 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 UBE2BP63146 152 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 MAJINQ3KP22 176 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 PCP2Q8IVA1 136 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 hADV29S1A0JD25 119 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 NDUFA1O15239 70 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 ZNF503Q96F45 646 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 TM2D2Q9BX73 214 aa6.47□□□□□ -1.37
SPTLC3-201ENST00000399002 INSL3P51460 131 aa6.46□□□□□ -1.37
SPTLC3-201ENST00000399002 ODF3L1Q8IXM7 274 aa6.46□□□□□ -1.37
SPTLC3-201ENST00000399002 RPL39LQ96EH5 51 aaKnown RBP6.46□□□□□ -1.37
SPTLC3-201ENST00000399002 MYO9BQ13459 2157 aa6.46□□□□□ -1.37
SPTLC3-201ENST00000399002 NDUFB1O75438 58 aa6.46□□□□□ -1.37
SPTLC3-201ENST00000399002 IGKV1-17P01599 117 aa6.46□□□□□ -1.37
SPTLC3-201ENST00000399002 CAMK2N2Q96S95 79 aa6.46□□□□□ -1.37
SPTLC3-201ENST00000399002 C19orf71A6NCJ1 209 aa6.46□□□□□ -1.38
SPTLC3-201ENST00000399002 IGLV2-14P01704 120 aa6.46□□□□□ -1.38
SPTLC3-201ENST00000399002 GYPEP15421 78 aa6.46□□□□□ -1.38
SPTLC3-201ENST00000399002 TINCRA0A1B0GVN0 87 aa6.46□□□□□ -1.38
SPTLC3-201ENST00000399002 MP68P56378 58 aa6.46□□□□□ -1.38
SPTLC3-201ENST00000399002 SPATA12Q7Z6I5 190 aa6.46□□□□□ -1.38
SPTLC3-201ENST00000399002 KIAA0100Q14667 2235 aaKnown RBP6.46□□□□□ -1.38
SPTLC3-201ENST00000399002 IGHV1-58A0A0C4DH39 117 aa6.46□□□□□ -1.38
SPTLC3-201ENST00000399002 TRBV10-1A0A0K0K1A3 114 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms