RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 PFN2P35080 140 aa12.74□□□□□ -0.37
PCDHA12-201ENST00000398631 SPAG8Q99932 426 aaPredicted RBP12.74□□□□□ -0.37
PCDHA12-201ENST00000398631 A0A1W2PNU3 283 aaPredicted RBP12.74□□□□□ -0.37
PCDHA12-201ENST00000398631 Q6ZSR3 168 aa12.74□□□□□ -0.37
PCDHA12-201ENST00000398631 RMI2Q96E14 147 aa12.74□□□□□ -0.37
PCDHA12-201ENST00000398631 PYGO2Q9BRQ0 406 aa12.74□□□□□ -0.37
PCDHA12-201ENST00000398631 F6UB75 175 aa12.74□□□□□ -0.37
PCDHA12-201ENST00000398631 DAZAP2Q15038 168 aaPredicted RBP12.74□□□□□ -0.37
PCDHA12-201ENST00000398631 NPBQ8NG41 125 aa12.73□□□□□ -0.37
PCDHA12-201ENST00000398631 ZMAT4Q9H898 229 aa12.73□□□□□ -0.37
PCDHA12-201ENST00000398631 HLA-DMBP28068 263 aa12.73□□□□□ -0.37
PCDHA12-201ENST00000398631 DEFB136Q30KP8 78 aa12.73□□□□□ -0.37
PCDHA12-201ENST00000398631 IGF2BP2-AS1Q96M15 143 aa12.73□□□□□ -0.37
PCDHA12-201ENST00000398631 C17orf77Q96MU5 243 aa12.73□□□□□ -0.37
PCDHA12-201ENST00000398631 DYNAPQ8N1N2 210 aa12.73□□□□□ -0.37
PCDHA12-201ENST00000398631 NPYP01303 97 aa12.73□□□□□ -0.37
PCDHA12-201ENST00000398631 SNHG12Q9BXW3 62 aa12.73□□□□□ -0.37
PCDHA12-201ENST00000398631 IGLC2P0DOY2 106 aa12.72□□□□□ -0.37
PCDHA12-201ENST00000398631 IGLC3P0DOY3 106 aa12.72□□□□□ -0.37
PCDHA12-201ENST00000398631 C20orf78Q9BR46 151 aa12.72□□□□□ -0.37
PCDHA12-201ENST00000398631 BLCAPP62952 87 aa12.72□□□□□ -0.37
PCDHA12-201ENST00000398631 ADAMTSL5Q6ZMM2 481 aa12.72□□□□□ -0.37
PCDHA12-201ENST00000398631 SIGLEC8Q9NYZ4 499 aa12.72□□□□□ -0.37
PCDHA12-201ENST00000398631 RHOHQ15669 191 aa12.72□□□□□ -0.37
PCDHA12-201ENST00000398631 GTSF1LQ9H1H1 148 aa12.72□□□□□ -0.37
PCDHA12-201ENST00000398631 EML6Q6ZMW3 1958 aa12.72□□□□□ -0.37
PCDHA12-201ENST00000398631 OCIAD2Q56VL3 154 aa12.72□□□□□ -0.37
PCDHA12-201ENST00000398631 SEM1Q6ZVN7 128 aa12.72□□□□□ -0.37
PCDHA12-201ENST00000398631 LTAP01374 205 aa12.71□□□□□ -0.37
PCDHA12-201ENST00000398631 NKAPP1Q8N9T2 125 aa12.71□□□□□ -0.37
PCDHA12-201ENST00000398631 ANGP03950 147 aaKnown RBP12.71□□□□□ -0.38
PCDHA12-201ENST00000398631 RBAKDNA6NC62 111 aa12.7□□□□□ -0.38
PCDHA12-201ENST00000398631 NDUFA12Q9UI09 145 aa12.7□□□□□ -0.38
PCDHA12-201ENST00000398631 TRBV20-1A0A075B6N2 111 aa12.7□□□□□ -0.38
PCDHA12-201ENST00000398631 HIST1H4AP62805 103 aaKnown RBP12.7□□□□□ -0.38
PCDHA12-201ENST00000398631 IGFBPL1Q8WX77 278 aa12.7□□□□□ -0.38
PCDHA12-201ENST00000398631 K7EIM0 57 aa12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 LGALS9BQ3B8N2 356 aa12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 LGALS9CQ6DKI2 356 aa12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 AJUBAQ96IF1 538 aa12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 DENND4CQ5VZ89 1909 aa12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 A0A096LPF7 62 aa12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 F8VRH5 84 aa12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 NOP10Q9NPE3 64 aaKnown RBP12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 IGLV11-55A0A075B6I3 123 aa12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 C9orf66Q5T8R8 295 aa12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 IGHV1-24A0A0C4DH33 117 aa12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 NXPH4O95158 308 aa12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 U3KQE9 123 aa12.69□□□□□ -0.38
PCDHA12-201ENST00000398631 C9JAW5 83 aa12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 IGKV1-17P01599 117 aa12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 MRPL35Q9NZE8 188 aaKnown RBP12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 I3L2K1 104 aa12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 SPINK8P0C7L1 97 aa12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 SLURP1P55000 103 aa12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 CCDC168Q8NDH2 2452 aa12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 GNRH2O43555 120 aa12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 FBXL19-AS1Q494R0 122 aa12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 Q6ZWC4 215 aa12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 NRGNQ92686 78 aa12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 C9orf118A6NHY6 69 aa12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 HERVK_113P63121 156 aa12.68□□□□□ -0.38
PCDHA12-201ENST00000398631 EGR2P11161 476 aaPredicted RBP12.67□□□□□ -0.38
PCDHA12-201ENST00000398631 Q8N9W7 124 aa12.67□□□□□ -0.38
PCDHA12-201ENST00000398631 ZNF493Q6ZR52 646 aa12.67□□□□□ -0.38
PCDHA12-201ENST00000398631 KLF5Q13887 457 aaPredicted RBP12.66□□□□□ -0.38
PCDHA12-201ENST00000398631 FREM1Q5H8C1 2179 aa12.66□□□□□ -0.38
PCDHA12-201ENST00000398631 CTSGP08311 255 aa12.66□□□□□ -0.38
PCDHA12-201ENST00000398631 COX8AP10176 69 aa12.66□□□□□ -0.38
PCDHA12-201ENST00000398631 PRSS29PA6NIE9 313 aa12.65□□□□□ -0.38
PCDHA12-201ENST00000398631 GP9P14770 177 aa12.65□□□□□ -0.38
PCDHA12-201ENST00000398631 TMEM126AQ9H061 195 aa12.65□□□□□ -0.38
PCDHA12-201ENST00000398631 NCOR2Q9Y618 2525 aa12.65□□□□□ -0.38
PCDHA12-201ENST00000398631 CGB3P0DN86 165 aa12.65□□□□□ -0.38
PCDHA12-201ENST00000398631 MRAPQ8TCY5 172 aa12.65□□□□□ -0.38
PCDHA12-201ENST00000398631 CFHR4Q92496 578 aa12.65□□□□□ -0.38
PCDHA12-201ENST00000398631 A0A0J9YY99 117 aa12.65□□□□□ -0.39
PCDHA12-201ENST00000398631 ASPHD1Q5U4P2 390 aa12.65□□□□□ -0.39
PCDHA12-201ENST00000398631 LYPD6Q86Y78 171 aa12.65□□□□□ -0.39
PCDHA12-201ENST00000398631 C5orf56Q8N8D9 126 aa12.65□□□□□ -0.39
PCDHA12-201ENST00000398631 NAV2Q8IVL1 2488 aa12.64□□□□□ -0.39
PCDHA12-201ENST00000398631 IGLV1-47P01700 117 aa12.64□□□□□ -0.39
PCDHA12-201ENST00000398631 APRG1Q8IVJ8 170 aa12.64□□□□□ -0.39
PCDHA12-201ENST00000398631 LYPD6BQ8NI32 183 aa12.64□□□□□ -0.39
PCDHA12-201ENST00000398631 PIFOQ8TCI5 191 aa12.64□□□□□ -0.39
PCDHA12-201ENST00000398631 RNF152Q8N8N0 203 aa12.64□□□□□ -0.39
PCDHA12-201ENST00000398631 SPANXDQ9BXN6 97 aa12.64□□□□□ -0.39
PCDHA12-201ENST00000398631 INAFM2P0DMQ5 153 aa12.64□□□□□ -0.39
PCDHA12-201ENST00000398631 RITA1Q96K30 269 aa12.64□□□□□ -0.39
PCDHA12-201ENST00000398631 GAGE2AQ6NT46 116 aa12.64□□□□□ -0.39
PCDHA12-201ENST00000398631 K7EN84 100 aa12.63□□□□□ -0.39
PCDHA12-201ENST00000398631 Q8NA96 180 aa12.63□□□□□ -0.39
PCDHA12-201ENST00000398631 F8W1H4 67 aa12.63□□□□□ -0.39
PCDHA12-201ENST00000398631 IGLL1P15814 213 aa12.63□□□□□ -0.39
PCDHA12-201ENST00000398631 TAL2Q16559 108 aa12.63□□□□□ -0.39
PCDHA12-201ENST00000398631 J3QQQ9 107 aa12.63□□□□□ -0.39
PCDHA12-201ENST00000398631 BUB3O43684 328 aa12.63□□□□□ -0.39
PCDHA12-201ENST00000398631 K7EMI3 77 aa12.62□□□□□ -0.39
PCDHA12-201ENST00000398631 PPDPFLQ8WWR9 84 aa12.62□□□□□ -0.39
PCDHA12-201ENST00000398631 ZFP36P26651 326 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms