RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 AMTNQ6UX39 209 aa10.49□□□□□ -0.73
SEC13-208ENST00000397109 OR8A1Q8NGG7 326 aa10.49□□□□□ -0.73
SEC13-208ENST00000397109 V9GYV3 84 aa10.49□□□□□ -0.73
SEC13-208ENST00000397109 IGHV3OR16-12A0A075B7B8 117 aa10.49□□□□□ -0.73
SEC13-208ENST00000397109 HLA-DMBP28068 263 aa10.49□□□□□ -0.73
SEC13-208ENST00000397109 TMEM183AQ8IXX5 376 aa10.49□□□□□ -0.73
SEC13-208ENST00000397109 MRPL53Q96EL3 112 aaKnown RBP10.49□□□□□ -0.73
SEC13-208ENST00000397109 ZNF492Q9P255 531 aa10.49□□□□□ -0.73
SEC13-208ENST00000397109 PLECQ15149 4684 aaKnown RBP10.48□□□□□ -0.73
SEC13-208ENST00000397109 ALMS1Q8TCU4 4167 aa10.48□□□□□ -0.73
SEC13-208ENST00000397109 RYR2Q92736 4967 aa10.48□□□□□ -0.73
SEC13-208ENST00000397109 A0A1W2PPQ1 181 aa10.48□□□□□ -0.73
SEC13-208ENST00000397109 TCTAP57738 103 aa10.48□□□□□ -0.73
SEC13-208ENST00000397109 HIST1H1AQ02539 215 aaPredicted RBP10.48□□□□□ -0.73
SEC13-208ENST00000397109 CT83Q5H943 113 aa10.48□□□□□ -0.73
SEC13-208ENST00000397109 LINC00476Q8WZB0 136 aa10.48□□□□□ -0.73
SEC13-208ENST00000397109 PPP1R14DQ9NXH3 145 aa10.48□□□□□ -0.73
SEC13-208ENST00000397109 C5orf52A6NGY3 159 aa10.47□□□□□ -0.73
SEC13-208ENST00000397109 DIRC3C9JPN6 131 aa10.47□□□□□ -0.73
SEC13-208ENST00000397109 MGST1P10620 155 aaKnown RBP10.47□□□□□ -0.73
SEC13-208ENST00000397109 GNG5P63218 68 aa10.47□□□□□ -0.73
SEC13-208ENST00000397109 C1orf158Q8N1D5 194 aa10.47□□□□□ -0.73
SEC13-208ENST00000397109 EXOC3-AS1Q8N2X6 119 aa10.47□□□□□ -0.73
SEC13-208ENST00000397109 LINC00479Q96M42 142 aa10.47□□□□□ -0.73
SEC13-208ENST00000397109 TMEM208Q9BTX3 173 aa10.47□□□□□ -0.73
SEC13-208ENST00000397109 DNAH1Q9P2D7 4330 aa10.46□□□□□ -0.73
SEC13-208ENST00000397109 TRAV10A0A0B4J240 114 aa10.46□□□□□ -0.74
SEC13-208ENST00000397109 TEX48A0A1B0GUV7 120 aa10.46□□□□□ -0.74
SEC13-208ENST00000397109 SMIM27A0A1W2PRY6 76 aa10.46□□□□□ -0.74
SEC13-208ENST00000397109 FAM231BA6NCW3 169 aa10.46□□□□□ -0.74
SEC13-208ENST00000397109 INSP01308 110 aa10.46□□□□□ -0.74
SEC13-208ENST00000397109 TRGC2P03986 189 aa10.46□□□□□ -0.74
SEC13-208ENST00000397109 SPART-AS1P0CW21 52 aa10.46□□□□□ -0.74
SEC13-208ENST00000397109 OR5I1Q13606 314 aa10.46□□□□□ -0.74
SEC13-208ENST00000397109 SPINK13Q1W4C9 94 aa10.46□□□□□ -0.74
SEC13-208ENST00000397109 RRN3P1Q2M238 152 aa10.46□□□□□ -0.74
SEC13-208ENST00000397109 RASL11AQ6T310 242 aa10.46□□□□□ -0.74
SEC13-208ENST00000397109 COX8CQ7Z4L0 72 aa10.46□□□□□ -0.74
SEC13-208ENST00000397109 TRAV34A0A0B4J273 112 aa10.45□□□□□ -0.74
SEC13-208ENST00000397109 RBAKDNA6NC62 111 aa10.45□□□□□ -0.74
SEC13-208ENST00000397109 M0R2Z0 102 aa10.45□□□□□ -0.74
SEC13-208ENST00000397109 GATCO43716 136 aaKnown RBP10.45□□□□□ -0.74
SEC13-208ENST00000397109 LY6G6CO95867 125 aa10.45□□□□□ -0.74
SEC13-208ENST00000397109 IGLV2-11P01706 119 aa10.45□□□□□ -0.74
SEC13-208ENST00000397109 SAPCD1Q5SSQ6 148 aa10.45□□□□□ -0.74
SEC13-208ENST00000397109 Q6ZTC4 211 aa10.45□□□□□ -0.74
SEC13-208ENST00000397109 OR10J6PQ8NGY7 276 aa10.45□□□□□ -0.74
SEC13-208ENST00000397109 CELA1Q9UNI1 258 aa10.45□□□□□ -0.74
SEC13-208ENST00000397109 ZNF705GA8MUZ8 300 aaPredicted RBP10.44□□□□□ -0.74
SEC13-208ENST00000397109 M0R3E3 92 aa10.44□□□□□ -0.74
SEC13-208ENST00000397109 PHOX2AO14813 284 aa10.44□□□□□ -0.74
SEC13-208ENST00000397109 CRXO43186 299 aaPredicted RBP10.44□□□□□ -0.74
SEC13-208ENST00000397109 C12orf74Q32Q52 190 aa10.44□□□□□ -0.74
SEC13-208ENST00000397109 GOLT1AQ6ZVE7 132 aa10.44□□□□□ -0.74
SEC13-208ENST00000397109 Q86TA4 180 aa10.44□□□□□ -0.74
SEC13-208ENST00000397109 ZFP82Q8N141 532 aa10.44□□□□□ -0.74
SEC13-208ENST00000397109 NUDT10Q8NFP7 164 aa10.44□□□□□ -0.74
SEC13-208ENST00000397109 DAZAP1Q96EP5 407 aaKnown RBP10.44□□□□□ -0.74
SEC13-208ENST00000397109 NUDT11Q96G61 164 aa10.44□□□□□ -0.74
SEC13-208ENST00000397109 GFRA4Q9GZZ7 299 aa10.44□□□□□ -0.74
SEC13-208ENST00000397109 RNASE7Q9H1E1 156 aaKnown RBP10.44□□□□□ -0.74
SEC13-208ENST00000397109 C19orf71A6NCJ1 209 aa10.43□□□□□ -0.74
SEC13-208ENST00000397109 TSPOP30536 169 aa10.43□□□□□ -0.74
SEC13-208ENST00000397109 EMP1P54849 157 aa10.43□□□□□ -0.74
SEC13-208ENST00000397109 WDR73Q6P4I2 378 aa10.43□□□□□ -0.74
SEC13-208ENST00000397109 TMEM256Q8N2U0 113 aa10.43□□□□□ -0.74
SEC13-208ENST00000397109 PSG8Q9UQ74 426 aa10.43□□□□□ -0.74
SEC13-208ENST00000397109 A8MWL6 223 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 IGLL5B9A064 214 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 NPIPB6E9PJ23 425 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 MT-ND6P03923 174 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 CDKN1BP46527 198 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 LGALS9CQ6DKI2 356 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 TSKUQ8WUA8 353 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 GNB1LQ9BYB4 327 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 DKK2Q9UBU2 259 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 RPH3ALQ9UNE2 315 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 DEFB131BA0A096LNP1 70 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 HIST1H2BKO60814 126 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 HIST1H2BJP06899 126 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 TRGC1P0CF51 173 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 HIST1H2BOP23527 126 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 HIST1H2BBP33778 126 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 HIST1H2BDP58876 126 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 SNRPEP62304 92 aaKnown RBP10.42□□□□□ -0.74
SEC13-208ENST00000397109 HIST1H2BCP62807 126 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 HIST2H2BEQ16778 126 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.42□□□□□ -0.74
SEC13-208ENST00000397109 HIST1H2BHQ93079 126 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 HIST1H2BNQ99877 126 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 HIST1H2BMQ99879 126 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 C20orf144Q9BQM9 153 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 NAT8BQ9UHF3 227 aa10.42□□□□□ -0.74
SEC13-208ENST00000397109 TRAV12-2A0A075B6T6 113 aa10.41□□□□□ -0.74
SEC13-208ENST00000397109 PRAC2D3DTV9 90 aa10.41□□□□□ -0.74
SEC13-208ENST00000397109 P01737 135 aa10.41□□□□□ -0.74
SEC13-208ENST00000397109 HOXA5P20719 270 aa10.41□□□□□ -0.74
SEC13-208ENST00000397109 FOXA3P55318 350 aaPredicted RBP10.41□□□□□ -0.74
SEC13-208ENST00000397109 FAM222AQ5U5X8 452 aa10.41□□□□□ -0.74
SEC13-208ENST00000397109 ATP5L2Q7Z4Y8 100 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms