RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 C11orf1Q9H5F2 150 aa9.79□□□□□ -0.84
SEC13-206ENST00000397102 SULT1A1P50225 295 aa9.78□□□□□ -0.84
SEC13-206ENST00000397102 RPL37AP61513 92 aaKnown RBP9.78□□□□□ -0.84
SEC13-206ENST00000397102 MIR17HGQ75NE6 70 aa9.78□□□□□ -0.84
SEC13-206ENST00000397102 FXYD5Q96DB9 178 aa9.78□□□□□ -0.84
SEC13-206ENST00000397102 RNF222A6NCQ9 220 aa9.77□□□□□ -0.85
SEC13-206ENST00000397102 GGTLC3B5MD39 225 aa9.77□□□□□ -0.85
SEC13-206ENST00000397102 CCSO14618 274 aa9.77□□□□□ -0.85
SEC13-206ENST00000397102 IGLV2-11P01706 119 aa9.77□□□□□ -0.85
SEC13-206ENST00000397102 TYMSP04818 313 aa9.77□□□□□ -0.85
SEC13-206ENST00000397102 OR10J4P0C629 311 aa9.77□□□□□ -0.85
SEC13-206ENST00000397102 HNRNPA3P51991 378 aaKnown RBP9.77□□□□□ -0.85
SEC13-206ENST00000397102 HBG1P69891 147 aa9.77□□□□□ -0.85
SEC13-206ENST00000397102 HBG2P69892 147 aa9.77□□□□□ -0.85
SEC13-206ENST00000397102 DAZ4Q86SG3 579 aaKnown RBP9.77□□□□□ -0.85
SEC13-206ENST00000397102 PAXXQ9BUH6 204 aa9.77□□□□□ -0.85
SEC13-206ENST00000397102 NPCDR1Q9BY65 106 aa9.77□□□□□ -0.85
SEC13-206ENST00000397102 SH3BGRL3Q9H299 93 aa9.77□□□□□ -0.85
SEC13-206ENST00000397102 DAZ3Q9NR90 486 aaKnown RBP9.77□□□□□ -0.85
SEC13-206ENST00000397102 H3BMQ9 156 aa9.76□□□□□ -0.85
SEC13-206ENST00000397102 PVALBP20472 110 aaPredicted RBP9.76□□□□□ -0.85
SEC13-206ENST00000397102 ATP6V1FQ16864 119 aa9.76□□□□□ -0.85
SEC13-206ENST00000397102 CFAP126Q5VTH2 177 aa9.76□□□□□ -0.85
SEC13-206ENST00000397102 STX12Q86Y82 276 aa9.76□□□□□ -0.85
SEC13-206ENST00000397102 TMED6Q8WW62 240 aa9.76□□□□□ -0.85
SEC13-206ENST00000397102 RMI2Q96E14 147 aa9.76□□□□□ -0.85
SEC13-206ENST00000397102 ATP5SQ99766 215 aa9.76□□□□□ -0.85
SEC13-206ENST00000397102 LYRM2Q9NU23 88 aaPredicted RBP9.76□□□□□ -0.85
SEC13-206ENST00000397102 TRAV21A0A0B4J279 112 aa9.75□□□□□ -0.85
SEC13-206ENST00000397102 IGSF23A1L1A6 192 aa9.75□□□□□ -0.85
SEC13-206ENST00000397102 C5orf51A6NDU8 294 aa9.75□□□□□ -0.85
SEC13-206ENST00000397102 DIRC3C9JPN6 131 aa9.75□□□□□ -0.85
SEC13-206ENST00000397102 NOL3O60936 208 aaKnown RBP9.75□□□□□ -0.85
SEC13-206ENST00000397102 MT1HL1P0DM35 61 aa9.75□□□□□ -0.85
SEC13-206ENST00000397102 INPP1P49441 399 aa9.75□□□□□ -0.85
SEC13-206ENST00000397102 RANP62826 216 aaKnown RBP9.75□□□□□ -0.85
SEC13-206ENST00000397102 TMEM252Q8N6L7 170 aa9.75□□□□□ -0.85
SEC13-206ENST00000397102 DAZAP1Q96EP5 407 aaKnown RBP9.75□□□□□ -0.85
SEC13-206ENST00000397102 KCNS1Q96KK3 526 aa9.75□□□□□ -0.85
SEC13-206ENST00000397102 SDF2L1Q9HCN8 221 aa9.75□□□□□ -0.85
SEC13-206ENST00000397102 MGST1P10620 155 aaKnown RBP9.74□□□□□ -0.85
SEC13-206ENST00000397102 S100A5P33763 92 aa9.74□□□□□ -0.85
SEC13-206ENST00000397102 ZNF876PQ49A33 203 aa9.74□□□□□ -0.85
SEC13-206ENST00000397102 TRAV8-1A0A0A6YYK1 113 aa9.73□□□□□ -0.85
SEC13-206ENST00000397102 IGHV3-73A0A0B4J1V6 119 aa9.73□□□□□ -0.85
SEC13-206ENST00000397102 FAM25EA8MYX2 175 aa9.73□□□□□ -0.85
SEC13-206ENST00000397102 BTCP35070 178 aa9.73□□□□□ -0.85
SEC13-206ENST00000397102 SPANXN2Q5MJ10 180 aa9.73□□□□□ -0.85
SEC13-206ENST00000397102 DPPA3Q6W0C5 159 aa9.73□□□□□ -0.85
SEC13-206ENST00000397102 IGKV2D-24A0A075B6R9 120 aa9.72□□□□□ -0.85
SEC13-206ENST00000397102 OR7C2O60412 319 aa9.72□□□□□ -0.85
SEC13-206ENST00000397102 TRIQKQ629K1 86 aa9.72□□□□□ -0.85
SEC13-206ENST00000397102 ASB13Q8WXK3 278 aa9.72□□□□□ -0.85
SEC13-206ENST00000397102 RNF213Q63HN8 5207 aa9.71□□□□□ -0.85
SEC13-206ENST00000397102 F6UZH7 168 aa9.71□□□□□ -0.86
SEC13-206ENST00000397102 LINC00694P0DN24 101 aa9.71□□□□□ -0.86
SEC13-206ENST00000397102 S100A10P60903 97 aa9.71□□□□□ -0.86
SEC13-206ENST00000397102 UBE2L3P68036 154 aaKnown RBP9.71□□□□□ -0.86
SEC13-206ENST00000397102 CNPY1Q3B7I2 92 aa9.71□□□□□ -0.86
SEC13-206ENST00000397102 THAP6Q8TBB0 222 aa9.71□□□□□ -0.86
SEC13-206ENST00000397102 C2orf50Q96LR7 162 aa9.71□□□□□ -0.86
SEC13-206ENST00000397102 LRP2P98164 4655 aa9.71□□□□□ -0.86
SEC13-206ENST00000397102 A0A087WWC5 75 aa9.7□□□□□ -0.86
SEC13-206ENST00000397102 CENPXA8MT69 81 aa9.7□□□□□ -0.86
SEC13-206ENST00000397102 SEC11BP0C7V7 166 aa9.7□□□□□ -0.86
SEC13-206ENST00000397102 DNAJC30Q96LL9 226 aa9.7□□□□□ -0.86
SEC13-206ENST00000397102 KCNIP2Q9NS61 270 aa9.7□□□□□ -0.86
SEC13-206ENST00000397102 RPH3ALQ9UNE2 315 aa9.7□□□□□ -0.86
SEC13-206ENST00000397102 GAGE12JA6NER3 117 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 GAGE1Q13065 139 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 GAGE4Q13068 117 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 GAGE5Q13069 117 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 RAB32Q13637 225 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 GAGE13Q4V321 117 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 ZNF506Q5JVG8 444 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 Q6ZRU5 148 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 CYB561D1Q8N8Q1 229 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 PTH2Q96A98 100 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 TVP23CQ96ET8 276 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 HYLS1Q96M11 299 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 C9orf85Q96MD7 179 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 TREM1Q9NP99 234 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 URGCP-MRPS24S4R325 110 aa9.69□□□□□ -0.86
SEC13-206ENST00000397102 IL15RAQ13261 267 aa9.68□□□□□ -0.86
SEC13-206ENST00000397102 C14orf177Q52M58 125 aa9.68□□□□□ -0.86
SEC13-206ENST00000397102 CMTM2Q8TAZ6 248 aa9.68□□□□□ -0.86
SEC13-206ENST00000397102 OTORQ9NRC9 128 aa9.68□□□□□ -0.86
SEC13-206ENST00000397102 KLK12Q9UKR0 248 aa9.68□□□□□ -0.86
SEC13-206ENST00000397102 PGPEP1LA6NFU8 196 aa9.67□□□□□ -0.86
SEC13-206ENST00000397102 FAM74A1Q5RGS3 127 aa9.67□□□□□ -0.86
SEC13-206ENST00000397102 ATRAIDQ6UW56 229 aa9.67□□□□□ -0.86
SEC13-206ENST00000397102 GOLT1AQ6ZVE7 132 aa9.67□□□□□ -0.86
SEC13-206ENST00000397102 NIT1Q86X76 327 aa9.67□□□□□ -0.86
SEC13-206ENST00000397102 OR10G9Q8NGN4 311 aa9.67□□□□□ -0.86
SEC13-206ENST00000397102 OR5C1Q8NGR4 320 aa9.67□□□□□ -0.86
SEC13-206ENST00000397102 NMES1Q9C002 83 aa9.67□□□□□ -0.86
SEC13-206ENST00000397102 PGPA6NDG6 321 aa9.66□□□□□ -0.86
SEC13-206ENST00000397102 NHLH2Q02577 135 aa9.66□□□□□ -0.86
SEC13-206ENST00000397102 KHDC3LQ587J8 217 aa9.66□□□□□ -0.86
SEC13-206ENST00000397102 ZFP2Q6ZN57 461 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms