RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 SH2D1AO60880 128 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 IGLV2-8P01709 118 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 SPART-AS1P0CW21 52 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 EMP1P54849 157 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 TCL1AP56279 114 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 ZNF415Q09FC8 603 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 C11orf45Q8TAV5 145 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 BIN3Q9NQY0 253 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 C11orf21Q9P2W6 132 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 TP53TG3Q9ULZ0 132 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 CELA1Q9UNI1 258 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 TYMSP04818 313 aa11.74□□□□□ -0.53
AP1S3-202ENST00000396653 DAZ2Q13117 558 aaKnown RBP11.74□□□□□ -0.53
AP1S3-202ENST00000396653 FAM222AQ5U5X8 452 aa11.74□□□□□ -0.53
AP1S3-202ENST00000396653 LINC01559Q495D7 138 aa11.73□□□□□ -0.53
AP1S3-202ENST00000396653 DNAH7Q8WXX0 4024 aa11.73□□□□□ -0.53
AP1S3-202ENST00000396653 LY96Q9Y6Y9 160 aa11.73□□□□□ -0.53
AP1S3-202ENST00000396653 IGKV3D-20A0A0C4DH25 116 aa11.72□□□□□ -0.53
AP1S3-202ENST00000396653 IGHV3-16A0A0C4DH30 117 aa11.72□□□□□ -0.53
AP1S3-202ENST00000396653 CEBPGP53567 150 aa11.72□□□□□ -0.53
AP1S3-202ENST00000396653 SRSF3P84103 164 aaKnown RBP11.72□□□□□ -0.53
AP1S3-202ENST00000396653 FAM74A3Q4VXF1 159 aa11.72□□□□□ -0.53
AP1S3-202ENST00000396653 MUC7Q8TAX7 377 aa11.72□□□□□ -0.53
AP1S3-202ENST00000396653 SMIM7Q9BQ49 75 aa11.72□□□□□ -0.53
AP1S3-202ENST00000396653 NOP10Q9NPE3 64 aaKnown RBP11.72□□□□□ -0.53
AP1S3-202ENST00000396653 GSN-AS1Q9NRJ2 163 aa11.72□□□□□ -0.53
AP1S3-202ENST00000396653 CXCL1P09341 107 aa11.71□□□□□ -0.53
AP1S3-202ENST00000396653 MGST1P10620 155 aaKnown RBP11.71□□□□□ -0.53
AP1S3-202ENST00000396653 DNLZQ5SXM8 178 aa11.71□□□□□ -0.53
AP1S3-202ENST00000396653 PRR27Q6MZM9 219 aa11.71□□□□□ -0.53
AP1S3-202ENST00000396653 LINC00612Q8N6U2 182 aa11.71□□□□□ -0.53
AP1S3-202ENST00000396653 SPXQ9BT56 116 aa11.71□□□□□ -0.53
AP1S3-202ENST00000396653 MDFICQ9P1T7 246 aa11.71□□□□□ -0.53
AP1S3-202ENST00000396653 C19orf71A6NCJ1 209 aa11.7□□□□□ -0.54
AP1S3-202ENST00000396653 PGPEP1LA6NFU8 196 aa11.7□□□□□ -0.54
AP1S3-202ENST00000396653 ZNF727A8MUV8 499 aa11.7□□□□□ -0.54
AP1S3-202ENST00000396653 B4DEV8 164 aa11.7□□□□□ -0.54
AP1S3-202ENST00000396653 KRBOX1C9JBD0 128 aa11.7□□□□□ -0.54
AP1S3-202ENST00000396653 C9JQL5 133 aa11.7□□□□□ -0.54
AP1S3-202ENST00000396653 GNRH2O43555 120 aa11.7□□□□□ -0.54
AP1S3-202ENST00000396653 ORM1P02763 201 aa11.7□□□□□ -0.54
AP1S3-202ENST00000396653 NANOS2P60321 138 aaKnown RBP11.7□□□□□ -0.54
AP1S3-202ENST00000396653 C12orf74Q32Q52 190 aa11.7□□□□□ -0.54
AP1S3-202ENST00000396653 LGALS9BQ3B8N2 356 aa11.7□□□□□ -0.54
AP1S3-202ENST00000396653 SPINK4O60575 86 aa11.69□□□□□ -0.54
AP1S3-202ENST00000396653 DAD1P61803 113 aa11.69□□□□□ -0.54
AP1S3-202ENST00000396653 OCC1Q8TAD7 63 aa11.69□□□□□ -0.54
AP1S3-202ENST00000396653 C9orf85Q96MD7 179 aa11.69□□□□□ -0.54
AP1S3-202ENST00000396653 C3orf84H3BNL1 204 aa11.68□□□□□ -0.54
AP1S3-202ENST00000396653 M0R036 132 aa11.68□□□□□ -0.54
AP1S3-202ENST00000396653 ASIPP42127 132 aa11.68□□□□□ -0.54
AP1S3-202ENST00000396653 UQCC3Q6UW78 93 aa11.68□□□□□ -0.54
AP1S3-202ENST00000396653 DAZAP1Q96EP5 407 aaKnown RBP11.68□□□□□ -0.54
AP1S3-202ENST00000396653 C18orf15Q96N68 181 aa11.68□□□□□ -0.54
AP1S3-202ENST00000396653 K7EN84 100 aa11.67□□□□□ -0.54
AP1S3-202ENST00000396653 RNASE3P12724 160 aaKnown RBP11.67□□□□□ -0.54
AP1S3-202ENST00000396653 OR5I1Q13606 314 aa11.67□□□□□ -0.54
AP1S3-202ENST00000396653 SOHLH1Q5JUK2 328 aa11.67□□□□□ -0.54
AP1S3-202ENST00000396653 Q6ZTC4 211 aa11.67□□□□□ -0.54
AP1S3-202ENST00000396653 PTH2Q96A98 100 aa11.67□□□□□ -0.54
AP1S3-202ENST00000396653 IL36BQ9NZH7 164 aa11.67□□□□□ -0.54
AP1S3-202ENST00000396653 TRGV1A0A0A0MS02 117 aa11.66□□□□□ -0.54
AP1S3-202ENST00000396653 TRAV10A0A0B4J240 114 aa11.66□□□□□ -0.54
AP1S3-202ENST00000396653 LINC00862A6NCI5 91 aa11.66□□□□□ -0.54
AP1S3-202ENST00000396653 NUPR2A6NF83 97 aa11.66□□□□□ -0.54
AP1S3-202ENST00000396653 M0R2P5 195 aa11.66□□□□□ -0.54
AP1S3-202ENST00000396653 P01737 135 aa11.66□□□□□ -0.54
AP1S3-202ENST00000396653 MED14OSP0DP75 135 aa11.66□□□□□ -0.54
AP1S3-202ENST00000396653 S100A4P26447 101 aaKnown RBP11.66□□□□□ -0.54
AP1S3-202ENST00000396653 RPS20P60866 119 aaKnown RBP11.66□□□□□ -0.54
AP1S3-202ENST00000396653 Q6ZTI0 123 aa11.66□□□□□ -0.54
AP1S3-202ENST00000396653 FAM231DQ6ZW35 169 aa11.66□□□□□ -0.54
AP1S3-202ENST00000396653 LINC01551Q86U37 167 aa11.66□□□□□ -0.54
AP1S3-202ENST00000396653 NDUFAF3Q9BU61 184 aa11.66□□□□□ -0.54
AP1S3-202ENST00000396653 NAT8Q9UHE5 227 aa11.66□□□□□ -0.54
AP1S3-202ENST00000396653 MUC4Q99102 2169 aa11.65□□□□□ -0.54
AP1S3-202ENST00000396653 DEFB130BP0DP73 79 aa11.65□□□□□ -0.54
AP1S3-202ENST00000396653 DEFB130AP0DP74 79 aa11.65□□□□□ -0.54
AP1S3-202ENST00000396653 RPL19P84098 196 aaKnown RBP11.65□□□□□ -0.54
AP1S3-202ENST00000396653 TMEM241Q24JQ0 296 aa11.65□□□□□ -0.54
AP1S3-202ENST00000396653 ZNF575Q86XF7 245 aa11.65□□□□□ -0.54
AP1S3-202ENST00000396653 PHLDA1Q8WV24 401 aaPredicted RBP11.65□□□□□ -0.54
AP1S3-202ENST00000396653 RASL10AQ92737 203 aa11.65□□□□□ -0.54
AP1S3-202ENST00000396653 TMSB15BA0A087X1C1 80 aa11.64□□□□□ -0.55
AP1S3-202ENST00000396653 GAGE12BA1L429 117 aa11.64□□□□□ -0.55
AP1S3-202ENST00000396653 XKRY2A2RUG3 117 aa11.64□□□□□ -0.55
AP1S3-202ENST00000396653 GAGE7O76087 117 aa11.64□□□□□ -0.55
AP1S3-202ENST00000396653 SFTA3P0C7M3 94 aa11.64□□□□□ -0.55
AP1S3-202ENST00000396653 GAGE12FP0CL80 117 aa11.64□□□□□ -0.55
AP1S3-202ENST00000396653 GAGE12GP0CL81 117 aa11.64□□□□□ -0.55
AP1S3-202ENST00000396653 GAGE12IP0CL82 117 aa11.64□□□□□ -0.55
AP1S3-202ENST00000396653 PIK3CD-AS1Q5SR53 167 aa11.64□□□□□ -0.55
AP1S3-202ENST00000396653 NUDT10Q8NFP7 164 aa11.64□□□□□ -0.55
AP1S3-202ENST00000396653 NUDT11Q96G61 164 aa11.64□□□□□ -0.55
AP1S3-202ENST00000396653 MRPL16Q9NX20 251 aaKnown RBP11.64□□□□□ -0.55
AP1S3-202ENST00000396653 GRIFINA4D1Z8 144 aa11.63□□□□□ -0.55
AP1S3-202ENST00000396653 H3BVH4 76 aa11.63□□□□□ -0.55
AP1S3-202ENST00000396653 ATP5G1P05496 136 aa11.63□□□□□ -0.55
AP1S3-202ENST00000396653 RPL23P62829 140 aaKnown RBP11.63□□□□□ -0.55
AP1S3-202ENST00000396653 CEMP1Q6PRD7 247 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms