RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SDF2L1Q9HCN8 221 aa13.67□□□□□ -0.22
HOXA9-202ENST00000396345 C11orf21Q9P2W6 132 aa13.67□□□□□ -0.22
HOXA9-202ENST00000396345 GNRH2O43555 120 aa13.66□□□□□ -0.22
HOXA9-202ENST00000396345 DEFB130BP0DP73 79 aa13.66□□□□□ -0.22
HOXA9-202ENST00000396345 DEFB130AP0DP74 79 aa13.66□□□□□ -0.22
HOXA9-202ENST00000396345 CRIP1P50238 77 aa13.66□□□□□ -0.22
HOXA9-202ENST00000396345 TCL1AP56279 114 aa13.66□□□□□ -0.22
HOXA9-202ENST00000396345 ZNF415Q09FC8 603 aa13.66□□□□□ -0.22
HOXA9-202ENST00000396345 TOR2AQ5JU69 321 aa13.66□□□□□ -0.22
HOXA9-202ENST00000396345 CEMP1Q6PRD7 247 aaPredicted RBP13.66□□□□□ -0.22
HOXA9-202ENST00000396345 FAM210AQ96ND0 272 aa13.66□□□□□ -0.22
HOXA9-202ENST00000396345 EIF5A2Q9GZV4 153 aaKnown RBP13.66□□□□□ -0.22
HOXA9-202ENST00000396345 MDFICQ9P1T7 246 aa13.66□□□□□ -0.22
HOXA9-202ENST00000396345 TRAV10A0A0B4J240 114 aa13.65□□□□□ -0.22
HOXA9-202ENST00000396345 TYMSP04818 313 aa13.65□□□□□ -0.22
HOXA9-202ENST00000396345 FAM162BQ5T6X4 162 aa13.65□□□□□ -0.22
HOXA9-202ENST00000396345 MLST8Q9BVC4 326 aa13.65□□□□□ -0.22
HOXA9-202ENST00000396345 TENM2Q9NT68 2774 aa13.65□□□□□ -0.22
HOXA9-202ENST00000396345 RAB19A4D1S5 217 aa13.64□□□□□ -0.23
HOXA9-202ENST00000396345 SH2D1AO60880 128 aa13.64□□□□□ -0.23
HOXA9-202ENST00000396345 ZNF674Q2M3X9 581 aa13.64□□□□□ -0.23
HOXA9-202ENST00000396345 CENPWQ5EE01 88 aa13.64□□□□□ -0.23
HOXA9-202ENST00000396345 DEFB131BA0A096LNP1 70 aa13.63□□□□□ -0.23
HOXA9-202ENST00000396345 IGHV3-16A0A0C4DH30 117 aa13.63□□□□□ -0.23
HOXA9-202ENST00000396345 TMEM250H0YL14 139 aa13.63□□□□□ -0.23
HOXA9-202ENST00000396345 ORM1P02763 201 aa13.63□□□□□ -0.23
HOXA9-202ENST00000396345 GNG4P50150 75 aa13.63□□□□□ -0.23
HOXA9-202ENST00000396345 KLK5Q9Y337 293 aaPredicted RBP13.63□□□□□ -0.23
HOXA9-202ENST00000396345 TRGV1A0A0A0MS02 117 aa13.62□□□□□ -0.23
HOXA9-202ENST00000396345 GAGE12BA1L429 117 aa13.62□□□□□ -0.23
HOXA9-202ENST00000396345 SPINK4O60575 86 aa13.62□□□□□ -0.23
HOXA9-202ENST00000396345 GAGE7O76087 117 aa13.62□□□□□ -0.23
HOXA9-202ENST00000396345 GAGE12FP0CL80 117 aa13.62□□□□□ -0.23
HOXA9-202ENST00000396345 GAGE12GP0CL81 117 aa13.62□□□□□ -0.23
HOXA9-202ENST00000396345 GAGE12IP0CL82 117 aa13.62□□□□□ -0.23
HOXA9-202ENST00000396345 Q6ZTI0 123 aa13.62□□□□□ -0.23
HOXA9-202ENST00000396345 LINC00612Q8N6U2 182 aa13.62□□□□□ -0.23
HOXA9-202ENST00000396345 SPXQ9BT56 116 aa13.62□□□□□ -0.23
HOXA9-202ENST00000396345 DYNC2H1Q8NCM8 4307 aaKnown RBP13.62□□□□□ -0.23
HOXA9-202ENST00000396345 STARD9Q9P2P6 4700 aa13.62□□□□□ -0.23
HOXA9-202ENST00000396345 IGKV3D-20A0A0C4DH25 116 aa13.61□□□□□ -0.23
HOXA9-202ENST00000396345 B4DEV8 164 aa13.61□□□□□ -0.23
HOXA9-202ENST00000396345 NDUFS6O75380 124 aaKnown RBP13.61□□□□□ -0.23
HOXA9-202ENST00000396345 HTN3P15516 51 aa13.61□□□□□ -0.23
HOXA9-202ENST00000396345 RAB14P61106 215 aa13.61□□□□□ -0.23
HOXA9-202ENST00000396345 M0R036 132 aa13.6□□□□□ -0.23
HOXA9-202ENST00000396345 IGLV2-8P01709 118 aa13.6□□□□□ -0.23
HOXA9-202ENST00000396345 MGST1P10620 155 aaKnown RBP13.6□□□□□ -0.23
HOXA9-202ENST00000396345 CEBPGP53567 150 aa13.6□□□□□ -0.23
HOXA9-202ENST00000396345 LGALS9BQ3B8N2 356 aa13.6□□□□□ -0.23
HOXA9-202ENST00000396345 PRR27Q6MZM9 219 aa13.6□□□□□ -0.23
HOXA9-202ENST00000396345 SMIM12Q96EX1 92 aa13.6□□□□□ -0.23
HOXA9-202ENST00000396345 TRBV20OR9-2A0A075B6H5 130 aa13.59□□□□□ -0.23
HOXA9-202ENST00000396345 KRBOX1C9JBD0 128 aa13.59□□□□□ -0.23
HOXA9-202ENST00000396345 ATP5G1P05496 136 aa13.59□□□□□ -0.23
HOXA9-202ENST00000396345 IFITM2Q01629 132 aa13.59□□□□□ -0.23
HOXA9-202ENST00000396345 PARLQ9H300 379 aa13.59□□□□□ -0.23
HOXA9-202ENST00000396345 MRPL16Q9NX20 251 aaKnown RBP13.59□□□□□ -0.23
HOXA9-202ENST00000396345 TRGV2A0A075B6R0 118 aa13.58□□□□□ -0.24
HOXA9-202ENST00000396345 SRP19P09132 144 aaKnown RBP13.58□□□□□ -0.24
HOXA9-202ENST00000396345 LINC01559Q495D7 138 aa13.58□□□□□ -0.24
HOXA9-202ENST00000396345 PGPEP1LA6NFU8 196 aa13.57□□□□□ -0.24
HOXA9-202ENST00000396345 IGLL5B9A064 214 aa13.57□□□□□ -0.24
HOXA9-202ENST00000396345 C9JCJ5 164 aa13.57□□□□□ -0.24
HOXA9-202ENST00000396345 M0R2P5 195 aa13.57□□□□□ -0.24
HOXA9-202ENST00000396345 S100A4P26447 101 aaKnown RBP13.57□□□□□ -0.24
HOXA9-202ENST00000396345 ASIPP42127 132 aa13.57□□□□□ -0.24
HOXA9-202ENST00000396345 TMSB15BA0A087X1C1 80 aa13.56□□□□□ -0.24
HOXA9-202ENST00000396345 F5H768 121 aa13.56□□□□□ -0.24
HOXA9-202ENST00000396345 RNASE3P12724 160 aaKnown RBP13.56□□□□□ -0.24
HOXA9-202ENST00000396345 OR5I1Q13606 314 aa13.56□□□□□ -0.24
HOXA9-202ENST00000396345 PEA15Q15121 130 aa13.56□□□□□ -0.24
HOXA9-202ENST00000396345 C9orf85Q96MD7 179 aa13.56□□□□□ -0.24
HOXA9-202ENST00000396345 BIN3Q9NQY0 253 aa13.56□□□□□ -0.24
HOXA9-202ENST00000396345 GRIFINA4D1Z8 144 aa13.55□□□□□ -0.24
HOXA9-202ENST00000396345 DNLZQ5SXM8 178 aa13.55□□□□□ -0.24
HOXA9-202ENST00000396345 RASL10AQ92737 203 aa13.55□□□□□ -0.24
HOXA9-202ENST00000396345 DAZAP1Q96EP5 407 aaKnown RBP13.55□□□□□ -0.24
HOXA9-202ENST00000396345 C18orf15Q96N68 181 aa13.55□□□□□ -0.24
HOXA9-202ENST00000396345 RPL19P84098 196 aaKnown RBP13.54□□□□□ -0.24
HOXA9-202ENST00000396345 SRSF3P84103 164 aaKnown RBP13.54□□□□□ -0.24
HOXA9-202ENST00000396345 CLLU1Q5K131 121 aa13.54□□□□□ -0.24
HOXA9-202ENST00000396345 ZNF575Q86XF7 245 aa13.54□□□□□ -0.24
HOXA9-202ENST00000396345 OCC1Q8TAD7 63 aa13.54□□□□□ -0.24
HOXA9-202ENST00000396345 SMIM7Q9BQ49 75 aa13.54□□□□□ -0.24
HOXA9-202ENST00000396345 SMDT1Q9H4I9 107 aa13.54□□□□□ -0.24
HOXA9-202ENST00000396345 IGHV4-4A0A075B6R2 117 aa13.53□□□□□ -0.24
HOXA9-202ENST00000396345 FAM210BQ96KR6 192 aa13.53□□□□□ -0.24
HOXA9-202ENST00000396345 C19orf71A6NCJ1 209 aa13.52□□□□□ -0.25
HOXA9-202ENST00000396345 ZNF727A8MUV8 499 aa13.52□□□□□ -0.25
HOXA9-202ENST00000396345 C9JQL5 133 aa13.52□□□□□ -0.25
HOXA9-202ENST00000396345 H3BVH4 76 aa13.52□□□□□ -0.25
HOXA9-202ENST00000396345 TCTAP57738 103 aa13.52□□□□□ -0.25
HOXA9-202ENST00000396345 TMEM88Q6PEY1 159 aa13.52□□□□□ -0.25
HOXA9-202ENST00000396345 IL36BQ9NZH7 164 aa13.52□□□□□ -0.25
HOXA9-202ENST00000396345 APLNQ9ULZ1 77 aa13.52□□□□□ -0.25
HOXA9-202ENST00000396345 MUC4Q99102 2169 aa13.52□□□□□ -0.25
HOXA9-202ENST00000396345 PLECQ15149 4684 aaKnown RBP13.52□□□□□ -0.25
HOXA9-202ENST00000396345 K7EN84 100 aa13.51□□□□□ -0.25
HOXA9-202ENST00000396345 IGHV3-53P01767 116 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 354.4 ms