RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 BOD1L2Q8IYS8 172 aa13.64□□□□□ -0.23
UBFD1-201ENST00000395878 TANC1Q9C0D5 1861 aa13.64□□□□□ -0.23
UBFD1-201ENST00000395878 TRAV13-2A0A0B4J235 113 aa13.64□□□□□ -0.23
UBFD1-201ENST00000395878 MORN5Q5VZ52 161 aa13.64□□□□□ -0.23
UBFD1-201ENST00000395878 ZNF747Q9BV97 191 aa13.64□□□□□ -0.23
UBFD1-201ENST00000395878 DKK2Q9UBU2 259 aa13.63□□□□□ -0.23
UBFD1-201ENST00000395878 VPREB3Q9UKI3 123 aa13.63□□□□□ -0.23
UBFD1-201ENST00000395878 K7EP13 123 aa13.63□□□□□ -0.23
UBFD1-201ENST00000395878 NXPH4O95158 308 aa13.63□□□□□ -0.23
UBFD1-201ENST00000395878 CFHR4Q92496 578 aa13.63□□□□□ -0.23
UBFD1-201ENST00000395878 PCNX1Q96RV3 2341 aa13.62□□□□□ -0.23
UBFD1-201ENST00000395878 CENPVL3A0A0U1RRI6 287 aa13.62□□□□□ -0.23
UBFD1-201ENST00000395878 MALRD1Q5VYJ5 2156 aa13.62□□□□□ -0.23
UBFD1-201ENST00000395878 NPBQ8NG41 125 aa13.62□□□□□ -0.23
UBFD1-201ENST00000395878 SPANXDQ9BXN6 97 aa13.62□□□□□ -0.23
UBFD1-201ENST00000395878 UBL5Q9BZL1 73 aa13.62□□□□□ -0.23
UBFD1-201ENST00000395878 FOXE3Q13461 319 aa13.61□□□□□ -0.23
UBFD1-201ENST00000395878 TMEM126AQ9H061 195 aa13.61□□□□□ -0.23
UBFD1-201ENST00000395878 DEFB112Q30KQ8 113 aa13.61□□□□□ -0.23
UBFD1-201ENST00000395878 TSSC4Q9Y5U2 329 aaPredicted RBP13.61□□□□□ -0.23
UBFD1-201ENST00000395878 F6UB75 175 aa13.61□□□□□ -0.23
UBFD1-201ENST00000395878 GNRH2O43555 120 aa13.61□□□□□ -0.23
UBFD1-201ENST00000395878 RMI2Q96E14 147 aa13.61□□□□□ -0.23
UBFD1-201ENST00000395878 PRSS29PA6NIE9 313 aa13.61□□□□□ -0.23
UBFD1-201ENST00000395878 HOXD3P31249 432 aaPredicted RBP13.6□□□□□ -0.23
UBFD1-201ENST00000395878 J3QKU1 62 aa13.6□□□□□ -0.23
UBFD1-201ENST00000395878 RBMY1FQ15415 496 aaKnown RBP13.6□□□□□ -0.23
UBFD1-201ENST00000395878 I3L2K1 104 aa13.6□□□□□ -0.23
UBFD1-201ENST00000395878 GP9P14770 177 aa13.6□□□□□ -0.23
UBFD1-201ENST00000395878 SCRT2Q9NQ03 307 aa13.6□□□□□ -0.23
UBFD1-201ENST00000395878 DOCK9Q9BZ29 2069 aa13.59□□□□□ -0.23
UBFD1-201ENST00000395878 PLXND1Q9Y4D7 1925 aa13.59□□□□□ -0.23
UBFD1-201ENST00000395878 IGHV4-59P01825 116 aa13.59□□□□□ -0.23
UBFD1-201ENST00000395878 SPRNQ5BIV9 151 aa13.59□□□□□ -0.23
UBFD1-201ENST00000395878 RPL32P62910 135 aaKnown RBP13.59□□□□□ -0.23
UBFD1-201ENST00000395878 IGF2-ASQ6U949 168 aa13.59□□□□□ -0.23
UBFD1-201ENST00000395878 WT1P19544 449 aaPredicted RBP13.59□□□□□ -0.23
UBFD1-201ENST00000395878 COA6Q5JTJ3 125 aaKnown RBP13.59□□□□□ -0.23
UBFD1-201ENST00000395878 C9orf153Q5TBE3 101 aa13.59□□□□□ -0.23
UBFD1-201ENST00000395878 LYPD6Q86Y78 171 aa13.59□□□□□ -0.23
UBFD1-201ENST00000395878 IGF2BP2-AS1Q96M15 143 aa13.58□□□□□ -0.23
UBFD1-201ENST00000395878 ANGP03950 147 aaKnown RBP13.58□□□□□ -0.24
UBFD1-201ENST00000395878 GRNP28799 593 aaKnown RBP13.58□□□□□ -0.24
UBFD1-201ENST00000395878 CRLF1O75462 422 aa13.58□□□□□ -0.24
UBFD1-201ENST00000395878 CARD19Q96LW7 228 aa13.58□□□□□ -0.24
UBFD1-201ENST00000395878 K7EIM0 57 aa13.58□□□□□ -0.24
UBFD1-201ENST00000395878 PRSS33Q8NF86 280 aa13.58□□□□□ -0.24
UBFD1-201ENST00000395878 GTF3C1Q12789 2109 aa13.57□□□□□ -0.24
UBFD1-201ENST00000395878 IGHV7-81A0A0B4J1V7 117 aa13.57□□□□□ -0.24
UBFD1-201ENST00000395878 C12orf74Q32Q52 190 aa13.57□□□□□ -0.24
UBFD1-201ENST00000395878 U3KQE9 123 aa13.57□□□□□ -0.24
UBFD1-201ENST00000395878 IGLV11-55A0A075B6I3 123 aa13.57□□□□□ -0.24
UBFD1-201ENST00000395878 K7ERJ3 54 aa13.57□□□□□ -0.24
UBFD1-201ENST00000395878 DKK4Q9UBT3 224 aa13.56□□□□□ -0.24
UBFD1-201ENST00000395878 RNASE13Q5GAN3 156 aaKnown RBP13.56□□□□□ -0.24
UBFD1-201ENST00000395878 NOTCH4Q99466 2003 aa13.56□□□□□ -0.24
UBFD1-201ENST00000395878 CDPF1Q6NVV7 123 aa13.56□□□□□ -0.24
UBFD1-201ENST00000395878 IGKV1-17P01599 117 aa13.56□□□□□ -0.24
UBFD1-201ENST00000395878 SHANK1Q9Y566 2161 aa13.56□□□□□ -0.24
UBFD1-201ENST00000395878 NOP10Q9NPE3 64 aaKnown RBP13.55□□□□□ -0.24
UBFD1-201ENST00000395878 H3BMG7 143 aa13.55□□□□□ -0.24
UBFD1-201ENST00000395878 RNF152Q8N8N0 203 aa13.55□□□□□ -0.24
UBFD1-201ENST00000395878 NUP210Q8TEM1 1887 aaPredicted RBP13.54□□□□□ -0.24
UBFD1-201ENST00000395878 HAMPP81172 84 aa13.54□□□□□ -0.24
UBFD1-201ENST00000395878 FRMPD3Q5JV73 1810 aa13.54□□□□□ -0.24
UBFD1-201ENST00000395878 PATE2Q6UY27 113 aa13.54□□□□□ -0.24
UBFD1-201ENST00000395878 DSCR8Q96T75 97 aa13.54□□□□□ -0.24
UBFD1-201ENST00000395878 A0A096LPF7 62 aa13.54□□□□□ -0.24
UBFD1-201ENST00000395878 CCL24O00175 119 aa13.54□□□□□ -0.24
UBFD1-201ENST00000395878 IGFBPL1Q8WX77 278 aa13.54□□□□□ -0.24
UBFD1-201ENST00000395878 CTSGP08311 255 aa13.53□□□□□ -0.24
UBFD1-201ENST00000395878 CFC1BP0CG36 223 aa13.53□□□□□ -0.24
UBFD1-201ENST00000395878 CFC1P0CG37 223 aa13.53□□□□□ -0.24
UBFD1-201ENST00000395878 TRAV25A0A0B4J276 109 aa13.53□□□□□ -0.24
UBFD1-201ENST00000395878 IGHV4-61A0A0C4DH41 118 aa13.53□□□□□ -0.24
UBFD1-201ENST00000395878 KIR2DL5BA0A0G2JN68 375 aa13.53□□□□□ -0.24
UBFD1-201ENST00000395878 KIR2DL5BA0A0G2JPC4 375 aa13.53□□□□□ -0.24
UBFD1-201ENST00000395878 KIR2DL5AQ8N109 375 aa13.53□□□□□ -0.24
UBFD1-201ENST00000395878 GATA1P15976 413 aaPredicted RBP13.52□□□□□ -0.24
UBFD1-201ENST00000395878 SLC25A29Q8N8R3 303 aa13.52□□□□□ -0.24
UBFD1-201ENST00000395878 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.52□□□□□ -0.25
UBFD1-201ENST00000395878 IGKV2-29A2NJV5 120 aaPredicted RBP13.52□□□□□ -0.25
UBFD1-201ENST00000395878 HERV-K104P63124 156 aa13.52□□□□□ -0.25
UBFD1-201ENST00000395878 SUMO4Q6EEV6 95 aa13.51□□□□□ -0.25
UBFD1-201ENST00000395878 PCP2Q8IVA1 136 aa13.51□□□□□ -0.25
UBFD1-201ENST00000395878 AJUBAQ96IF1 538 aa13.51□□□□□ -0.25
UBFD1-201ENST00000395878 RITA1Q96K30 269 aa13.51□□□□□ -0.25
UBFD1-201ENST00000395878 Q9H8V8 135 aa13.51□□□□□ -0.25
UBFD1-201ENST00000395878 C16orf54Q6UWD8 224 aa13.51□□□□□ -0.25
UBFD1-201ENST00000395878 GAGE12HA6NDE8 117 aa13.51□□□□□ -0.25
UBFD1-201ENST00000395878 AMTNQ6UX39 209 aa13.51□□□□□ -0.25
UBFD1-201ENST00000395878 PRSS47A8MTI9 375 aa13.5□□□□□ -0.25
UBFD1-201ENST00000395878 BUB3O43684 328 aa13.5□□□□□ -0.25
UBFD1-201ENST00000395878 CLPSL2Q6UWE3 100 aa13.5□□□□□ -0.25
UBFD1-201ENST00000395878 IGHV4-38-2P0DP08 117 aa13.5□□□□□ -0.25
UBFD1-201ENST00000395878 XCL1P47992 114 aa13.5□□□□□ -0.25
UBFD1-201ENST00000395878 LINC01545Q5VT33 79 aa13.5□□□□□ -0.25
UBFD1-201ENST00000395878 MED13LQ71F56 2210 aa13.5□□□□□ -0.25
UBFD1-201ENST00000395878 IFITM1P13164 125 aa13.5□□□□□ -0.25
UBFD1-201ENST00000395878 DEFB136Q30KP8 78 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms