RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 NKX6-2Q9C056 277 aaPredicted RBP9.1□□□□□ -0.95
VCPKMT-201ENST00000395859 EIF5A2Q9GZV4 153 aaKnown RBP9.1□□□□□ -0.95
VCPKMT-201ENST00000395859 VAX2Q9UIW0 290 aa9.1□□□□□ -0.95
VCPKMT-201ENST00000395859 CARHSP1Q9Y2V2 147 aaKnown RBP9.1□□□□□ -0.95
VCPKMT-201ENST00000395859 LY96Q9Y6Y9 160 aa9.1□□□□□ -0.95
VCPKMT-201ENST00000395859 ZNF98A6NK75 572 aa9.09□□□□□ -0.95
VCPKMT-201ENST00000395859 LINC00869P0C866 280 aa9.09□□□□□ -0.95
VCPKMT-201ENST00000395859 HTN1P15515 57 aa9.09□□□□□ -0.95
VCPKMT-201ENST00000395859 GALR1P47211 349 aa9.09□□□□□ -0.95
VCPKMT-201ENST00000395859 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.09□□□□□ -0.95
VCPKMT-201ENST00000395859 CCDC28AQ8IWP9 274 aa9.09□□□□□ -0.95
VCPKMT-201ENST00000395859 GPR82Q96P67 336 aa9.09□□□□□ -0.95
VCPKMT-201ENST00000395859 TCEAL7Q9BRU2 100 aa9.09□□□□□ -0.95
VCPKMT-201ENST00000395859 DNAJC4Q9NNZ3 241 aa9.09□□□□□ -0.95
VCPKMT-201ENST00000395859 TREM1Q9NP99 234 aa9.09□□□□□ -0.95
VCPKMT-201ENST00000395859 TMEM167BQ9NRX6 74 aa9.09□□□□□ -0.95
VCPKMT-201ENST00000395859 IGKV1OR2-108A0A075B7D4 117 aa9.08□□□□□ -0.96
VCPKMT-201ENST00000395859 TMEM250H0YL14 139 aa9.08□□□□□ -0.96
VCPKMT-201ENST00000395859 BCL2P10415 239 aa9.08□□□□□ -0.96
VCPKMT-201ENST00000395859 ZNF726P1Q15940 193 aa9.08□□□□□ -0.96
VCPKMT-201ENST00000395859 FAM74A3Q4VXF1 159 aa9.08□□□□□ -0.96
VCPKMT-201ENST00000395859 MIC13Q5XKP0 118 aa9.08□□□□□ -0.96
VCPKMT-201ENST00000395859 FUT9Q9Y231 359 aa9.08□□□□□ -0.96
VCPKMT-201ENST00000395859 LPAP08519 4548 aa9.08□□□□□ -0.96
VCPKMT-201ENST00000395859 H7BYZ3 331 aa9.07□□□□□ -0.96
VCPKMT-201ENST00000395859 IGFL4Q6B9Z1 124 aa9.07□□□□□ -0.96
VCPKMT-201ENST00000395859 FAM122CQ6P4D5 195 aa9.07□□□□□ -0.96
VCPKMT-201ENST00000395859 Q6ZTI0 123 aa9.07□□□□□ -0.96
VCPKMT-201ENST00000395859 WFDC10BQ8IUB3 73 aa9.07□□□□□ -0.96
VCPKMT-201ENST00000395859 OR1B1Q8NGR6 318 aa9.07□□□□□ -0.96
VCPKMT-201ENST00000395859 F8W036 122 aa9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 HMGB3O15347 200 aaKnown RBP9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 PDE6DO43924 150 aa9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 ZNF324O75467 553 aaPredicted RBP9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 SNAPINO95295 136 aa9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 MEF2BQ02080 365 aaPredicted RBP9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 DAZ2Q13117 558 aaKnown RBP9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 KIR3DS1Q14943 382 aa9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 C10orf113Q5VZT2 155 aa9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 LCN15Q6UWW0 184 aa9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 RNF182Q8N6D2 247 aa9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 DAZAP1Q96EP5 407 aaKnown RBP9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 MUC2Q02817 5179 aa9.06□□□□□ -0.96
VCPKMT-201ENST00000395859 F6UZH7 168 aa9.05□□□□□ -0.96
VCPKMT-201ENST00000395859 COX7A2P2O60397 106 aa9.05□□□□□ -0.96
VCPKMT-201ENST00000395859 HYPMO75409 117 aa9.05□□□□□ -0.96
VCPKMT-201ENST00000395859 SFTA3P0C7M3 94 aa9.05□□□□□ -0.96
VCPKMT-201ENST00000395859 ORM2P19652 201 aa9.05□□□□□ -0.96
VCPKMT-201ENST00000395859 PNRC1Q12796 327 aaPredicted RBP9.05□□□□□ -0.96
VCPKMT-201ENST00000395859 RPUSD4Q96CM3 377 aaKnown RBP9.05□□□□□ -0.96
VCPKMT-201ENST00000395859 C20orf144Q9BQM9 153 aa9.05□□□□□ -0.96
VCPKMT-201ENST00000395859 SLC25A22Q9H936 323 aa9.05□□□□□ -0.96
VCPKMT-201ENST00000395859 PRELID1Q9Y255 219 aa9.05□□□□□ -0.96
VCPKMT-201ENST00000395859 ICOSQ9Y6W8 199 aa9.05□□□□□ -0.96
VCPKMT-201ENST00000395859 RS1O15537 224 aa9.04□□□□□ -0.96
VCPKMT-201ENST00000395859 EVI2AP22794 236 aa9.04□□□□□ -0.96
VCPKMT-201ENST00000395859 CDKN1BP46527 198 aa9.04□□□□□ -0.96
VCPKMT-201ENST00000395859 OR8A1Q8NGG7 326 aa9.04□□□□□ -0.96
VCPKMT-201ENST00000395859 CHAC1Q9BUX1 264 aa9.04□□□□□ -0.96
VCPKMT-201ENST00000395859 GNG13Q9P2W3 67 aa9.04□□□□□ -0.96
VCPKMT-201ENST00000395859 A0A1W2PRE2 83 aa9.03□□□□□ -0.96
VCPKMT-201ENST00000395859 B4DEV8 164 aa9.03□□□□□ -0.96
VCPKMT-201ENST00000395859 SRP19P09132 144 aaKnown RBP9.03□□□□□ -0.96
VCPKMT-201ENST00000395859 GCHFRP30047 84 aa9.03□□□□□ -0.96
VCPKMT-201ENST00000395859 CCL20P78556 96 aa9.03□□□□□ -0.96
VCPKMT-201ENST00000395859 WFDC2Q14508 124 aa9.03□□□□□ -0.96
VCPKMT-201ENST00000395859 TMEM14CQ9P0S9 112 aa9.03□□□□□ -0.96
VCPKMT-201ENST00000395859 APOC3P02656 99 aa9.02□□□□□ -0.97
VCPKMT-201ENST00000395859 CRYGDP07320 174 aa9.02□□□□□ -0.97
VCPKMT-201ENST00000395859 ARL14EPLP0DKL9 152 aa9.02□□□□□ -0.97
VCPKMT-201ENST00000395859 RPL7P18124 248 aaKnown RBP9.02□□□□□ -0.97
VCPKMT-201ENST00000395859 GATA2P23769 480 aaPredicted RBP9.02□□□□□ -0.97
VCPKMT-201ENST00000395859 C10orf126Q8N4M7 172 aa9.02□□□□□ -0.97
VCPKMT-201ENST00000395859 CIRBP-AS1Q8TBR5 109 aa9.02□□□□□ -0.97
VCPKMT-201ENST00000395859 TMEM37Q8WXS4 190 aa9.02□□□□□ -0.97
VCPKMT-201ENST00000395859 HIGD1AQ9Y241 93 aa9.02□□□□□ -0.97
VCPKMT-201ENST00000395859 SNURFLB1AK76 121 aa9.01□□□□□ -0.97
VCPKMT-201ENST00000395859 H3BRN7 92 aa9.01□□□□□ -0.97
VCPKMT-201ENST00000395859 PAX4O43316 350 aa9.01□□□□□ -0.97
VCPKMT-201ENST00000395859 PSCAO43653 123 aa9.01□□□□□ -0.97
VCPKMT-201ENST00000395859 HIST1H1AQ02539 215 aaPredicted RBP9.01□□□□□ -0.97
VCPKMT-201ENST00000395859 RHEBQ15382 184 aa9.01□□□□□ -0.97
VCPKMT-201ENST00000395859 ARL6IP6Q8N6S5 226 aa9.01□□□□□ -0.97
VCPKMT-201ENST00000395859 SHANK2-AS3Q9BTD1 123 aa9.01□□□□□ -0.97
VCPKMT-201ENST00000395859 GAS8-AS1O95177 125 aa9□□□□□ -0.97
VCPKMT-201ENST00000395859 IGLV2-8P01709 118 aa9□□□□□ -0.97
VCPKMT-201ENST00000395859 PRB4P10163 310 aaPredicted RBP9□□□□□ -0.97
VCPKMT-201ENST00000395859 FGF8P55075 233 aaPredicted RBP9□□□□□ -0.97
VCPKMT-201ENST00000395859 SRSF3P84103 164 aaKnown RBP9□□□□□ -0.97
VCPKMT-201ENST00000395859 GCSAMLQ5JQS6 135 aa9□□□□□ -0.97
VCPKMT-201ENST00000395859 GFI1BQ5VTD9 330 aa9□□□□□ -0.97
VCPKMT-201ENST00000395859 NEGR1Q7Z3B1 354 aa9□□□□□ -0.97
VCPKMT-201ENST00000395859 LINC00305Q7Z4B0 112 aa9□□□□□ -0.97
VCPKMT-201ENST00000395859 C11orf72Q8NBR9 251 aa9□□□□□ -0.97
VCPKMT-201ENST00000395859 ZNF738Q8NE65 137 aa9□□□□□ -0.97
VCPKMT-201ENST00000395859 IBA57-AS1B1ANH7 110 aa8.99□□□□□ -0.97
VCPKMT-201ENST00000395859 OR7C2O60412 319 aa8.99□□□□□ -0.97
VCPKMT-201ENST00000395859 ADCYAP1P18509 176 aa8.99□□□□□ -0.97
VCPKMT-201ENST00000395859 CRYBA4P53673 196 aa8.99□□□□□ -0.97
VCPKMT-201ENST00000395859 PDE6HQ13956 83 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms